FC921486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_YERP3 (Spermidine synthase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=speE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 44/100 (44.00%), Postives = 70/100 (70.00%), Query Frame = 1 Query: 382 VEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 VE +L++ K+++Q++ +F++ G+V+ LDGV+Q TERDE Y EM+TH+PL + KKVL+I +LREVSRH ++E+I + EID VV+ + + Sbjct: 21 VENVLYREKTEHQDLVIFENPELGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGQAKKVLIIGGGDGAMLREVSRHKNIEQITMVEIDAGVVEFCRQY 120
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_ENT38 (Spermidine synthase OS=Enterobacter sp. (strain 638) GN=speE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 44/100 (44.00%), Postives = 69/100 (69.00%), Query Frame = 1 Query: 382 VEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 V+ +L+ K+D+Q++ +F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K VL+I +LREVSRH S+E I + EID VV + + Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVSRHKSIETITMVEIDAGVVSFCRQY 120
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_CLOK5 (Spermidine synthase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=speE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 43/105 (40.95%), Postives = 69/105 (65.71%), Query Frame = 1 Query: 367 AHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 A + K+++ L K+ YQ + + + G++L+LDG++Q T +DE Y EMITH+PL + PNP+KVL++ +REV +H +VEK+ +CEID+ VV K + Sbjct: 14 AMTYKIKETLVTKKTKYQELAIVDTYALGRMLVLDGIVQTTVKDEYVYHEMITHIPLFTHPNPQKVLIVGGGDGGTVREVLKHETVEKVVLCEIDEQVVYECKKY 118
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_CLOK1 (Spermidine synthase OS=Clostridium kluyveri (strain NBRC 12016) GN=speE PE=3 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.824e-19 Identity = 43/105 (40.95%), Postives = 69/105 (65.71%), Query Frame = 1 Query: 367 AHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 A + K+++ L K+ YQ + + + G++L+LDG++Q T +DE Y EMITH+PL + PNP+KVL++ +REV +H +VEK+ +CEID+ VV K + Sbjct: 14 AMTYKIKETLVTKKTKYQELAIVDTYALGRMLVLDGIVQTTVKDEYVYHEMITHIPLFTHPNPQKVLIVGGGDGGTVREVLKHETVEKVVLCEIDEQVVYECKKY 118
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_CLOBB (Spermidine synthase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=speE PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.688e-19 Identity = 45/116 (38.79%), Postives = 74/116 (63.79%), Query Frame = 1 Query: 352 MWPGEAH------SLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 +W E H S+KV++ L+ +S +Q + + +S +GK LDG++ +TE+DE Y +MI H+P+ + PN K VLVI +RE++R+ ++EKID+ EID+ VV+V K + Sbjct: 3 LWYTEKHTEYVKFSIKVDRELYTEQSKFQRIDILESKEFGKFFTLDGLMMVTEKDEFIYHDMIVHVPMATNPNIKNVLVIGAGDGGTIRELTRYKTIEKIDMVEIDERVVEVCKKY 118
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_MOOTA (Spermidine synthase OS=Moorella thermoacetica (strain ATCC 39073) GN=speE PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.817e-19 Identity = 47/117 (40.17%), Postives = 72/117 (61.54%), Query Frame = 1 Query: 331 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 WFSE+ P A S+++ + L K+ YQ + V + YG++L+LD +IQ T +DE Y EMI H+PL + PNP+ LVI V+RE+ +H S+EK+ + EID VV ++ + Sbjct: 5 WFSELQT--PDLAISVRLNQTLHHEKTPYQELAVVDTEAYGRMLLLDNIIQTTVKDEFFYHEMIAHVPLNTHPNPRTALVIGGGDGGVVREIVKHPSIEKVTLVEIDARVVANAREY 119
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_BUCAP (Spermidine synthase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=speE PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.817e-19 Identity = 41/100 (41.00%), Postives = 67/100 (67.00%), Query Frame = 1 Query: 382 VEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 ++KIL+Q K+ Y ++ +FQ+S G+++ +DGV+Q TE+DE Y EM+TH+P+ K VL++ +LRE+ RH S+E I + EID ++D+ K F Sbjct: 21 IDKILYQKKNKYHDIIIFQNSIMGRIMAIDGVVQTTEKDEFIYHEMLTHVPIFYHGLIKNVLIVGGGDGGILREICRHKSIENITMVEIDLNIIDLCKQF 120
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_EUBE2 (Spermidine synthase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=speE PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.291e-19 Identity = 48/117 (41.03%), Postives = 71/117 (60.68%), Query Frame = 1 Query: 331 WFSEISPMWPGEAHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 WFSE+ P ++VEK LF G+SDYQ + VFQS +GK L L+G + +E+D Y EM+ H+P+ P+ K VL+I V +E+ ++ ++E IDI E D M VDV + + Sbjct: 4 WFSELHS--PHVKFDIRVEKQLFSGESDYQRIDVFQSPEFGKFLTLNGSVIFSEQDCFIYNEMVVHVPMSVHPDVKNVLIIGGGDGGVSKELLQYDNIENIDIVEQDNMFVDVCREY 118
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_SILST (Spermidine synthase OS=Silicibacter sp. (strain TM1040) GN=speE PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19 Identity = 45/105 (42.86%), Postives = 69/105 (65.71%), Query Frame = 1 Query: 367 AHSLKVEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 A SL+V ++ + K+++Q + VFQ+ T+G+VL LD V+Q TE D Y EM+TH+P+ + K+VL+I + REV +H+SVE + + EID VVD SK + Sbjct: 16 AQSLRVSEMYYDSKTEHQRLKVFQNGTFGRVLTLDDVVQTTEGDNFIYHEMLTHVPILAHGAAKRVLIIGGGDGGIAREVLKHASVEHVTMVEIDAGVVDFSKEY 120
BLAST of FC921486 vs. ExPASy Swiss-Prot
Match: SPEE_SHIFL (Spermidine synthase OS=Shigella flexneri GN=speE PE=3 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 8.216e-19 Identity = 43/100 (43.00%), Postives = 69/100 (69.00%), Query Frame = 1 Query: 382 VEKILFQGKSDYQNVTVFQSSTYGKVLILDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIXXXXXXVLREVSRHSSVEKIDICEIDKMVVDVSKHF 681 V+ +L+ K+D+Q++ +F+++ +G+V+ LDGV+Q TERDE Y EM+TH+PL + + K VL+I +LREV+RH +VE I + EID VV + + Sbjct: 21 VDNVLYHEKTDHQDLIIFENAAFGRVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQY 120 The following BLAST results are available for this feature:
BLAST of FC921486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 196
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921486 ID=FC921486; Name=FC921486; organism=Citrus clementina; type=EST; length=690bpback to top |