FC921527

Overview
NameFC921527
Unique NameFC921527
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BACC3 (50S ribosomal protein L2 OS=Bacillus cereus (strain 03BB102) GN=rplB PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18
Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 1 
Query:  388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684
            M  M+  + + +IG+ +PL  + +GT++HNIE+ PG+GG+LVR+AGTSA++L +    + LVRL SG  +L+ + CRAT+G V N SH   K+ KAG+S
Sbjct:  114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRS 211
[Close]
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BACC1 (50S ribosomal protein L2 OS=Bacillus cereus (strain ATCC 10987) GN=rplB PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18
Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 1 
Query:  388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684
            M  M+  + + +IG+ +PL  + +GT++HNIE+ PG+GG+LVR+AGTSA++L +    + LVRL SG  +L+ + CRAT+G V N SH   K+ KAG+S
Sbjct:  114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRS 211
[Close]
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BACC0 (50S ribosomal protein L2 OS=Bacillus cereus (strain AH820) GN=rplB PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18
Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 1 
Query:  388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684
            M  M+  + + +IG+ +PL  + +GT++HNIE+ PG+GG+LVR+AGTSA++L +    + LVRL SG  +L+ + CRAT+G V N SH   K+ KAG+S
Sbjct:  114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRS 211
[Close]
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BACAN (50S ribosomal protein L2 OS=Bacillus anthracis GN=rplB PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18
Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 1 
Query:  388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684
            M  M+  + + +IG+ +PL  + +GT++HNIE+ PG+GG+LVR+AGTSA++L +    + LVRL SG  +L+ + CRAT+G V N SH   K+ KAG+S
Sbjct:  114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRS 211
[Close]
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BACAH (50S ribosomal protein L2 OS=Bacillus thuringiensis (strain Al Hakam) GN=rplB PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18
Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 1 
Query:  388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684
            M  M+  + + +IG+ +PL  + +GT++HNIE+ PG+GG+LVR+AGTSA++L +    + LVRL SG  +L+ + CRAT+G V N SH   K+ KAG+S
Sbjct:  114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRS 211
[Close]
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BACAC (50S ribosomal protein L2 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rplB PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18
Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 1 
Query:  388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684
            M  M+  + + +IG+ +PL  + +GT++HNIE+ PG+GG+LVR+AGTSA++L +    + LVRL SG  +L+ + CRAT+G V N SH   K+ KAG+S
Sbjct:  114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRS 211
[Close]
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BACAA (50S ribosomal protein L2 OS=Bacillus anthracis (strain A0248) GN=rplB PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.082e-18
Identity = 46/99 (46.46%), Postives = 70/99 (70.71%), Query Frame = 1 
Query:  388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684
            M  M+  + + +IG+ +PL  + +GT++HNIE+ PG+GG+LVR+AGTSA++L +    + LVRL SG  +L+ + CRAT+G V N SH   K+ KAG+S
Sbjct:  114 MEIMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLSACRATVGQVGNESHELIKIGKAGRS 211
[Close]
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BACCN (50S ribosomal protein L2 OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=rplB PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.846e-18
Identity = 46/99 (46.46%), Postives = 69/99 (69.70%), Query Frame = 1 
Query:  388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684
            M  M+  + + +IG+ +PL  + +GT++HNIE+ PG+GG+LVR+AGTSA++L +    + LVRL SG  +L+   CRAT+G V N SH   K+ KAG+S
Sbjct:  114 MEVMSGPEADIKIGNALPLMNIPVGTVVHNIELKPGRGGQLVRSAGTSAQVLGK-EGKYVLVRLTSGEVRLVLATCRATVGQVGNESHELIKIGKAGRS 211
[Close]
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_EXIS2 (50S ribosomal protein L2 OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=rplB PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.411e-18
Identity = 44/99 (44.44%), Postives = 70/99 (70.71%), Query Frame = 1 
Query:  388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684
            M+ M+ V+ + ++G+ +PL+ + +GT+IHNIE+ PG+GG+LVR+AGTSA++L +    + +VRL SG  ++I   CRAT+G V N  H    + KAG+S
Sbjct:  114 MQVMSGVEADIKVGNALPLSNIPVGTLIHNIELKPGKGGQLVRSAGTSAQLLGK-DGKYAIVRLQSGETRMILATCRATVGAVGNEEHELVNIGKAGRS 211
[Close]
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_STRSV (50S ribosomal protein L2 OS=Streptococcus sanguinis (strain SK36) GN=rplB PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18
Identity = 44/88 (50.00%), Postives = 63/88 (71.59%), Query Frame = 1 
Query:  421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684
            ++G+ +PLA + +GT++HNIE+ PG+GG+LVRAAG SA++L +    + LVRL SG  ++I   CRAT+G V N  HG   L KAG+S
Sbjct:  125 KVGNALPLANIPVGTLVHNIELKPGRGGELVRAAGASAQVLGQ-EGKYTLVRLQSGEVRMILGTCRATVGVVGNEQHGLVNLGKAGRS 211
The following BLAST results are available for this feature:
BLAST of FC921527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL2_BACC31.082e-1846.4650S ribosomal protein L2 OS=Bacillus cereus (strai... [more]
RL2_BACC11.082e-1846.4650S ribosomal protein L2 OS=Bacillus cereus (strai... [more]
RL2_BACC01.082e-1846.4650S ribosomal protein L2 OS=Bacillus cereus (strai... [more]
RL2_BACAN1.082e-1846.4650S ribosomal protein L2 OS=Bacillus anthracis GN=... [more]
RL2_BACAH1.082e-1846.4650S ribosomal protein L2 OS=Bacillus thuringiensis... [more]
RL2_BACAC1.082e-1846.4650S ribosomal protein L2 OS=Bacillus anthracis (st... [more]
RL2_BACAA1.082e-1846.4650S ribosomal protein L2 OS=Bacillus anthracis (st... [more]
RL2_BACCN1.846e-1846.4650S ribosomal protein L2 OS=Bacillus cereus subsp.... [more]
RL2_EXIS22.411e-1844.4450S ribosomal protein L2 OS=Exiguobacterium sibiri... [more]
RL2_STRSV4.112e-1850.0050S ribosomal protein L2 OS=Streptococcus sanguini... [more]

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Properties
Property NameValue
Genbank descriptionC32106A06EF RVDevelopN Citrus clementina cDNA clone C32106A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921527 ID=FC921527; Name=FC921527; organism=Citrus clementina; type=EST; length=695bp
GATCTCTCTAGTCTCTACTCACTTAGAAAAACTCTCACGGTGGCCGTCAC
CTTTCTTCTCAGTGTGATCACCCATCTTTCAATTCCACAGCATTCTTTTC
TCAGCCGTGGGGTGCTTTAGCTTCTGTCACCGCCGGCAACATGTTGTGAT
AGACAGTGAAATCAACAGAAGAAAACAAAACGTAGGAGAAAGAGACACAG
AAAGAGATCAGCAGAAATGGCTTTGTGCAGAGTACGCTCAGCTTCATCGA
CGCTCTTCAACAGGCTTCTCTGTCCTTCCGTTCTCAACAACAACACTACT
TATCGCTATCAGTCCTCTGAAACCGAATTAGTTGGTGATCCTTCAAAACA
AGAAAAACCAAAAAAAGAAACTGTGCGTGATAAGATAATGAGACAGATGG
CTCATGTTGATATAAATTCTCAAATTGGAAGTTGCATGCCACTTGCTTGT
ATGCGTATTGGGACCATCATTCACAACATTGAGGTAAACCCAGGACAAGG
TGGCAAGCTAGTTAGAGCTGCGGGGACGTCAGCCAAGATTTTGAAAGAAC
CCACTTCAAGCTTCTGTTTAGTAAGACTACCTTCTGGTAATGAGAAACTG
ATTGACACTAGATGTCGAGCCACCATTGGTACAGTGTCTAACCCAAGCCA
TGGAGCTAAGAAGCTTANGAAGGCTGGTCAGAGCGTTGGTTGGGT
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