FC921527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_ACIBS (50S ribosomal protein L2 OS=Acinetobacter baumannii (strain SDF) GN=rplB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12 Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 427 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAG 678 G+C+PL M IG+ +HN+E+ G+G +L R+AG S ++L S+ ++RL SG + + CRA IG VSN + + L KAG Sbjct: 127 GNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGASVQLLGR-DGSYAIIRLRSGEMRKVHVECRAVIGEVSNQENNLRSLGKAG 209
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_ACIB5 (50S ribosomal protein L2 OS=Acinetobacter baumannii (strain AB0057) GN=rplB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12 Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 427 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAG 678 G+C+PL M IG+ +HN+E+ G+G +L R+AG S ++L S+ ++RL SG + + CRA IG VSN + + L KAG Sbjct: 127 GNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGASVQLLGR-DGSYAIIRLRSGEMRKVHVECRAVIGEVSNQENNLRSLGKAG 209
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_ACIB3 (50S ribosomal protein L2 OS=Acinetobacter baumannii (strain AB307-0294) GN=rplB PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12 Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 1 Query: 427 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAG 678 G+C+PL M IG+ +HN+E+ G+G +L R+AG S ++L S+ ++RL SG + + CRA IG VSN + + L KAG Sbjct: 127 GNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGASVQLLGR-DGSYAIIRLRSGEMRKVHVECRAVIGEVSNQENNLRSLGKAG 209
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RK2_OSTTA (50S ribosomal protein L2, chloroplastic OS=Ostreococcus tauri GN=rpl2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12 Identity = 45/126 (35.71%), Postives = 69/126 (54.76%), Query Frame = 1 Query: 307 YQSSETELVGDPSKQEKPKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 YQ E + P+ E + D I+ V+ +G+ +PL M +G +HNIE++P +GG+LVR+AG A+++ + + +RLPSG +LI +C ATIG V N L KAG+S Sbjct: 96 YQDGEKRYILHPNGLE------IGDSIIASETAVNA---VGNSLPLMAMPLGVQVHNIEMHPKKGGQLVRSAGAVAQLVAK-EGEYVTLRLPSGEVRLISNKCWATIGQVGNMEAMNLSLGKAGRS 211
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RK2A_LIRTU (50S ribosomal protein L2-A, chloroplastic OS=Liriodendron tulipifera GN=rpl2-A PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12 Identity = 43/108 (39.81%), Postives = 63/108 (58.33%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLAC-MRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAG 678 P+ + D I+ + ++ +G+ +PL+ M +GT IHNIE+ G+GG+L RAAG AK++ + S L RLPSG +LI C AT+G V N K L +AG Sbjct: 104 PRGAIIGDTIV---SGTEVPISMGNALPLSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-RLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG 207
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RK2A_CHLSC (50S ribosomal protein L2-A, chloroplastic OS=Chloranthus spicatus GN=rpl2-A PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.159e-12 Identity = 43/109 (39.45%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLAC--MRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAG 678 P+ + D I+ + ++ +G+ +PL+ M +GT IHNIE+ G+GG+L RAAG AK++ + S L RLPSG +LI C AT+G V N K L +AG Sbjct: 105 PRGAIIGDTIV---SGTEVPISMGNALPLSATDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATL-RLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAG 209
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_TERTT (50S ribosomal protein L2 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=rplB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12 Identity = 33/86 (38.37%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAG 678 ++G+ +PL + +G++IH IE+ PG+G +L R+AG S +++ + +RL SG + ++ CRAT+G VSN H + L KAG Sbjct: 125 KVGNTLPLRNVPVGSVIHCIELKPGKGAQLARSAGASVQLVAR-EGQYATLRLRSGEMRKVEVECRATLGEVSNSEHSLRSLGKAG 209
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_SPIKU (50S ribosomal protein L2 OS=Spiroplasma kunkelii GN=rplB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12 Identity = 34/89 (38.20%), Postives = 56/89 (62.92%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKIL-KEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 ++G+CM L + GT++HN+E+ PG+GG+L R+AG+S + L K+ + +RL SG + + CRAT+G V N + KAG++ Sbjct: 125 KVGNCMKLKNIPEGTVLHNLELRPGKGGQLARSAGSSVQFLGKDEDGKYVTIRLTSGEVRKVLGECRATVGEVGNEDYALVNWGKAGRN 213
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_NEIMF (50S ribosomal protein L2 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=rplB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12 Identity = 36/86 (41.86%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAG 678 ++G+ +P+ + +GT IH IE+ PG+G ++ R+AG SA +L + ++ VRL SG + I+ CRATIG V N KK+ KAG Sbjct: 125 KVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLAK-EGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAG 209
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_NEIMA (50S ribosomal protein L2 OS=Neisseria meningitidis serogroup A GN=rplB PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.514e-12 Identity = 36/86 (41.86%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAG 678 ++G+ +P+ + +GT IH IE+ PG+G ++ R+AG SA +L + ++ VRL SG + I+ CRATIG V N KK+ KAG Sbjct: 125 KVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLAK-EGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAG 209 The following BLAST results are available for this feature:
BLAST of FC921527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921527 ID=FC921527; Name=FC921527; organism=Citrus clementina; type=EST; length=695bpback to top |