FC921527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_RICRO (50S ribosomal protein L2 OS=Rickettsia rickettsii (strain Iowa) GN=rplB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 44/114 (38.60%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS--VGW 693 P+K +V D+++ D + +IG+C+PL C+ IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++ +GW Sbjct: 107 PQKLSVGDRVISSQ---DADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGK-DSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGW 216
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_RICPU (50S ribosomal protein L2 OS=Rickettsia peacockii (strain Rustic) GN=rplB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 44/114 (38.60%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS--VGW 693 P+K +V D+++ D + +IG+C+PL C+ IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++ +GW Sbjct: 107 PQKLSVGDRVISSQ---DADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGK-DSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGW 216
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_RICCN (50S ribosomal protein L2 OS=Rickettsia conorii GN=rplB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 44/114 (38.60%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS--VGW 693 P+K +V D+++ D + +IG+C+PL C+ IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++ +GW Sbjct: 107 PQKLSVGDRVISSQ---DADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGK-DSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGW 216
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_RICAE (50S ribosomal protein L2 OS=Rickettsia africae (strain ESF-5) GN=rplB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 44/114 (38.60%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS--VGW 693 P+K +V D+++ D + +IG+C+PL C+ IGT +HN+E+ G+GG++ R+AGTS ++ + S + ++L SG +L+ C+ATIG++SNP L KAG++ +GW Sbjct: 107 PQKLSVGDRVISSQ---DADIKIGNCLPLKCIPIGTTLHNVEMKVGKGGQIARSAGTSVDLVGK-DSGYAQIKLRSGEFRLVPLDCKATIGSISNPDQKNINLGKAGRNRWLGW 216
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_MACCJ (50S ribosomal protein L2 OS=Macrococcus caseolyticus (strain JCSC5402) GN=rplB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 43/88 (48.86%), Postives = 63/88 (71.59%), Query Frame = 1 Query: 421 QIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 ++G+C+PL + +GT+IHNIE+ PG+GG+LVR+AG SA++L + + LVRL SG ++I + CRATIG V N H + KAG+S Sbjct: 125 KVGNCLPLQNIPVGTVIHNIELKPGKGGQLVRSAGASAQVLGK-EGKYVLVRLKSGEVRMILSTCRATIGQVGNEQHELINIGKAGRS 211
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_GEOSW (50S ribosomal protein L2 OS=Geobacillus sp. (strain WCH70) GN=rplB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 44/99 (44.44%), Postives = 67/99 (67.68%), Query Frame = 1 Query: 388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 M M+ D + ++G+ +PL + +GT +HNIE+ PG+GG+LVRAAGTSA++L + + +VRL SG ++I CRAT+G V N H K+ KAG++ Sbjct: 114 MEIMSGPDADIKVGNALPLENIPVGTFVHNIELKPGRGGQLVRAAGTSAQVLGK-EGKYVIVRLASGEVRMILGACRATVGEVGNEQHELVKIGKAGRA 211
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_ENTFA (50S ribosomal protein L2 OS=Enterococcus faecalis GN=rplB PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.041e-17 Identity = 43/99 (43.43%), Postives = 69/99 (69.70%), Query Frame = 1 Query: 388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 MR ++ + + ++G+ +PL + +GT+IHNIE+ PG+GG+L+R+AGTSA++L + + L+RL SG ++I CRATIG+V N H + KAG+S Sbjct: 114 MRLVSGPEADIKVGNALPLENIPVGTVIHNIEMKPGKGGQLIRSAGTSAQVLGK-EGKYVLIRLNSGEVRMILATCRATIGSVGNEQHELINIGKAGRS 211
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_OCHA4 (50S ribosomal protein L2 OS=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) GN=rplB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.666e-17 Identity = 45/110 (40.91%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQSV 687 P++ V DK++ A ++ + G+ MPLA M +GTI+HN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+SV Sbjct: 107 PQRLAVGDKVV---AGNSVDVKPGNAMPLASMPVGTIVHNVELKPGKGGQIARSAGTYAQLVGR-DQGMAILRLNSGEQRLVPGACFASVGAVSNPDHGNINDGKAGRSV 212
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_NEOSM (50S ribosomal protein L2 OS=Neorickettsia sennetsu (strain Miyayama) GN=rplB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.666e-17 Identity = 43/86 (50.00%), Postives = 61/86 (70.93%), Query Frame = 1 Query: 427 GSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 G+CMPL + +GT +HN+E+ PG GG+LVR+AG+SA+++ ++ LV LPSG ++LI + C ATIG VSN KL KAG+S Sbjct: 132 GACMPLGKVPLGTTVHNVELKPGAGGQLVRSAGSSARVIAR-DGNYTLVTLPSGEKRLILSTCHATIGAVSNADRKNTKLGKAGRS 216
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_LACSS (50S ribosomal protein L2 OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=rplB PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.666e-17 Identity = 44/92 (47.83%), Postives = 66/92 (71.74%), Query Frame = 1 Query: 406 VDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQ 681 V+ + ++G+ +PLA + GT+IHNIE+ PG+GG+LVR+AGTSA++L + + +VRL SG ++I CRAT+GTV N H K+ KAG+ Sbjct: 120 VNADIKVGNALPLANIPDGTLIHNIELKPGKGGQLVRSAGTSAQLLGK-EGKYAIVRLTSGETRMILLTCRATVGTVGNGQHELIKIGKAGR 210 The following BLAST results are available for this feature:
BLAST of FC921527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921527 ID=FC921527; Name=FC921527; organism=Citrus clementina; type=EST; length=695bpback to top |