FC921527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_MAGSM (50S ribosomal protein L2 OS=Magnetococcus sp. (strain MC-1) GN=rplB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 42/117 (35.90%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 334 GDPSKQEKPKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 G+ S P++ V D ++ +++ + G+CMPL M IGTIIHN+E+ PG+GG++ R+AG +++ + + +++PSG +L+ C AT+G VSNP + K+ KAG++ Sbjct: 99 GEKSYILAPQRLQVGDTVVSAKTLDNVDVKPGNCMPLRVMPIGTIIHNVELKPGKGGQVARSAGNYIQLMGK-EGKYAQLKMPSGEMRLVLLECMATVGMVSNPDNSNTKIGKAGRT 214
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_GEOTN (50S ribosomal protein L2 OS=Geobacillus thermodenitrificans (strain NG80-2) GN=rplB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 41/99 (41.41%), Postives = 68/99 (68.69%), Query Frame = 1 Query: 388 MRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 M M+ + + ++G+ +PL + +GT++HNIE+ PG+GG+LVRAAGTSA++L + + ++RL SG ++I +CRAT+G V N H + KAG++ Sbjct: 114 MEIMSGPNADIKVGNALPLENIPVGTLVHNIELKPGRGGQLVRAAGTSAQVLGK-EGKYVIIRLASGEVRMILGKCRATVGEVGNEQHELVNIGKAGRA 211
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BRUSU (50S ribosomal protein L2 OS=Brucella suis GN=rplB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 44/110 (40.00%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQSV 687 P++ V D+++ A ++ + G+ MPL+ M +GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+SV Sbjct: 107 PQRLAVGDQVV---AGNSVDVKPGNAMPLSSMPVGTIIHNVELKPGKGGQIARSAGTYAQLVGR-DQGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSV 212
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BRUSI (50S ribosomal protein L2 OS=Brucella suis (strain ATCC 23445 / NCTC 10510) GN=rplB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 44/110 (40.00%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQSV 687 P++ V D+++ A ++ + G+ MPL+ M +GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+SV Sbjct: 107 PQRLAVGDQVV---AGNSVDVKPGNAMPLSSMPVGTIIHNVELKPGKGGQIARSAGTYAQLVGR-DQGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSV 212
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BRUMB (50S ribosomal protein L2 OS=Brucella melitensis biotype 2 (strain ATCC 23457) GN=rplB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 44/110 (40.00%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQSV 687 P++ V D+++ A ++ + G+ MPL+ M +GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+SV Sbjct: 107 PQRLAVGDQVV---AGNSVDVKPGNAMPLSSMPVGTIIHNVELKPGKGGQIARSAGTYAQLVGR-DQGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSV 212
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BRUC2 (50S ribosomal protein L2 OS=Brucella canis (strain ATCC 23365 / NCTC 10854) GN=rplB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 44/110 (40.00%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQSV 687 P++ V D+++ A ++ + G+ MPL+ M +GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+SV Sbjct: 107 PQRLAVGDQVV---AGNSVDVKPGNAMPLSSMPVGTIIHNVELKPGKGGQIARSAGTYAQLVGR-DQGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSV 212
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BRUAB (50S ribosomal protein L2 OS=Brucella abortus GN=rplB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 44/110 (40.00%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQSV 687 P++ V D+++ A ++ + G+ MPL+ M +GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+SV Sbjct: 107 PQRLAVGDQVV---AGNSVDVKPGNAMPLSSMPVGTIIHNVELKPGKGGQIARSAGTYAQLVGR-DQGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSV 212
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BRUA2 (50S ribosomal protein L2 OS=Brucella abortus (strain 2308) GN=rplB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 44/110 (40.00%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQSV 687 P++ V D+++ A ++ + G+ MPL+ M +GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+SV Sbjct: 107 PQRLAVGDQVV---AGNSVDVKPGNAMPLSSMPVGTIIHNVELKPGKGGQIARSAGTYAQLVGR-DQGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSV 212
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BRUA1 (50S ribosomal protein L2 OS=Brucella abortus (strain S19) GN=rplB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 44/110 (40.00%), Postives = 72/110 (65.45%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQSV 687 P++ V D+++ A ++ + G+ MPL+ M +GTIIHN+E+ PG+GG++ R+AGT A+++ ++RL SG ++L+ C A++G VSNP HG KAG+SV Sbjct: 107 PQRLAVGDQVV---AGNSVDVKPGNAMPLSSMPVGTIIHNVELKPGKGGQIARSAGTYAQLVGR-DQGMAILRLNSGEQRLVSGACFASVGAVSNPDHGNINDGKAGRSV 212
BLAST of FC921527 vs. ExPASy Swiss-Prot
Match: RL2_BREBN (50S ribosomal protein L2 OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=rplB PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.013e-16 Identity = 49/109 (44.95%), Postives = 68/109 (62.39%), Query Frame = 1 Query: 358 PKKETVRDKIMRQMAHVDINSQIGSCMPLACMRIGTIIHNIEVNPGQGGKLVRAAGTSAKILKEPTSSFCLVRLPSGNEKLIDTRCRATIGTVSNPSHGAKKLXKAGQS 684 P V D+I+ + D + +IG+ +P+ + +GT IHNIE+ PG+GG+LVRAAGTSA++L F +VRL SG + I CRATIG V N H + KAG+S Sbjct: 107 PHNLKVGDQIV---SGADADIKIGNALPMEKIPVGTTIHNIELKPGKGGQLVRAAGTSAQLLGR-DGEFVIVRLSSGETRRIHNVCRATIGQVGNLDHELLNIGKAGRS 211 The following BLAST results are available for this feature:
BLAST of FC921527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921527 ID=FC921527; Name=FC921527; organism=Citrus clementina; type=EST; length=695bpback to top |