FC921531

Overview
NameFC921531
Unique NameFC921531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 2.720e-62
Identity = 118/199 (59.30%), Postives = 144/199 (72.36%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            S S AQL+P FY+ TCP   +I+   + NA  SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N NSARGF+V+D MKAA+E ACP  VSCAD+LAIA+++S+ L+GGPSW VP GRRD       LA+ NLP P  TL  LK RF NVGL+ ++DLVALSG HTFG++QCQF   RL++F  TG
Sbjct:   18 SLSHAQLSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETG 213          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 7.915e-62
Identity = 122/193 (63.21%), Postives = 147/193 (76.17%), Query Frame = 2
Query:  110 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGT 688
            QL   FY+ TCPNAS I+   +Q AF SD RI ASLIRLHFHDCFV+GCD SILLD+     SI SEK +  N NSARGF VVD +K ALE+ CPG+VSC+DILA+ASE SV+L+GGPSWTV LGRRD  TAN + A+  +P+PF+ L  +  +F+ VGLN N DLVALSGAHTFGRA+C  F+ RLF+F+GT
Sbjct:    1 QLNATFYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSG---SIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTN-DLVALSGAHTFGRARCGVFNNRLFNFSGT 189          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.008e-61
Identity = 122/198 (61.62%), Postives = 142/198 (71.72%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGT 688
            S+S AQL PDFY  TCP   NII   + N   +D RI ASL+RLHFHDCFV GCD SILLDN    TS  +EK +  N NS RGF+V+D MKAA+E ACP  VSCADI+ IAS+ SV LSGGP W VPLGRRD   A  +LA+  LP+PF TL  LK  F +VGLN  +DLVALSG HTFG+AQCQF + RL++FNGT
Sbjct:   25 SNSNAQLRPDFYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDN---STSFRTEKDAAPNKNSVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGT 219          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 6.701e-61
Identity = 123/200 (61.50%), Postives = 143/200 (71.50%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTGN 694
            S+S AQL PDFY  TCP   +II  ++ +   +D RI ASL+RLHFHDCFV GCD SILLDN    TS  +EK +  N NSARGF V+D MK ALE ACPG VSCADIL IAS+ SV LSGGP W VPLGRRD   A  +LA+  LP+PF  L  LK  F +VGLN  +DLVALSG HTFGRAQCQF + RL++FNGT +
Sbjct:   25 SNSNAQLRPDFYFGTCPFVFDIIGNIIVDELQTDPRIAASLLRLHFHDCFVRGCDASILLDN---STSFRTEKDAAPNANSARGFNVIDRMKVALERACPGRVSCADILTIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNS 221          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.493e-60
Identity = 122/198 (61.62%), Postives = 142/198 (71.72%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGT 688
            S+S AQL PDFY  TCP+  NII  ++ +   +D RI ASL+RLHFHDCFV GCD SILLDN    TS  +EK +  N NSARGF V+D MK +LE ACP  VSCAD+L IAS+ SV LSGGP W VPLGRRD   A   LA+  LP+PF TL  LK  F +VGLN  +DLVALSG HTFGRAQCQF + RL++FNGT
Sbjct:   25 SNSNAQLRPDFYFRTCPSVFNIIGDIIVDELRTDPRIAASLLRLHFHDCFVRGCDASILLDN---STSFRTEKDAAPNANSARGFGVIDRMKTSLERACPRTVSCADVLTIASQISVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGT 219          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.950e-60
Identity = 115/199 (57.79%), Postives = 142/199 (71.36%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            S S AQL+P FY+ TCP   +I    ++ A  SD RI AS++RLHFHDCFVNGCD SILLDN    TS  +EK +  N  SARGF+V+D MKAA+E ACP  VSCAD+LAIA+++SV L+GGPSW VP GRRD       LA+ NLP P  TL +LK +F NVGL+  +DLVALSG HTFG+ QCQF   RL++F+ +G
Sbjct:   20 SLSHAQLSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNT---TSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSG 215          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.264e-59
Identity = 115/199 (57.79%), Postives = 147/199 (73.87%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            S+ +AQL+PD Y  +CPN   I+   ++ A  ++IR+ ASLIRLHFHDCFVNGCD S+LLD        +SEK ++ N NS RGFEV+D +KAA+E+ACPG+VSCADIL +A+  SV LSGGP W V LGR+DG  AN+S A+ NLP+PF+ LD +  +F  VGLN  TD+VALSGAHTFG+A+C  FS RLF+F G G
Sbjct:   24 SAVRAQLSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGT------NSEKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSAN-NLPSPFEPLDAIIAKFAAVGLN-VTDVVALSGAHTFGQAKCDLFSNRLFNFTGAG 214          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 228.409 bits (581), Expect = 2.815e-59
Identity = 116/200 (58.00%), Postives = 146/200 (73.00%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTGN 694
            S  +AQL+PD Y  +CPN   I+   +  A  ++IR+ ASLIRLHFHDCFVNGCD S+LLD        DSEK ++ N NSARGFEV+D +KAA+E+ACPG+VSCADIL +A+  SV LSGGP W V LGR+DG  AN++ A+ NLP+PF+ LD +  +F  V LN  TD+VALSGAHTFG+A+C  FS RLF+F G GN
Sbjct:   24 SGVRAQLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGA------DSEKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSAN-NLPSPFEPLDAIIAKFVAVNLN-ITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGN 215          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.677e-59
Identity = 115/199 (57.79%), Postives = 145/199 (72.86%), Query Frame = 2
Query:   98 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTGN 694
            +S AQL+  FY+TTCPN ++I+ GV+     +D R  A +IRLHFHDCFVNGCDGSILLD     T  D+       N  A GF++VD +K ALE+ CPG+VSCADILA+ASE  V L+ GPSW V  GR+D  TANRS A+ ++P+PF+TL ++  +FTN G+ D TDLVALSGAHTFGRA+C  F QRLF+FNG+GN
Sbjct:   19 ASNAQLSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLDTDGTQTEKDAPA-----NVGAGGFDIVDDIKTALENVCPGVVSCADILALASEIGVVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGM-DLTDLVALSGAHTFGRARCGTFEQRLFNFNGSGN 211          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.397e-58
Identity = 118/193 (61.14%), Postives = 137/193 (70.98%), Query Frame = 2
Query:  110 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGT 688
            QL PDFY+ TCP+  NII  V+ +   +D RI AS++RLHFHDCFV GCD SILLD      S  +EK +  N NSARGF V+D MK ALE ACP  VSCADIL IAS+ SV LSGGPSW VPLGRRD   A   LA+  LP+PF TL  LK  F +VGLN  +DLVALSG HTFGRA+C F + RL++FNGT
Sbjct:    1 QLRPDFYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASILLDT---SKSFRTEKDAAPNVNSARGFNVIDRMKTALERACPRTVSCADILTIASQISVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCLFVTARLYNFNGT 190          
The following BLAST results are available for this feature:
BLAST of FC921531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER38_ARATH2.720e-6259.30Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PERA2_ARMRU7.915e-6263.21Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER23_ARATH3.008e-6161.62Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER22_ARATH6.701e-6161.50Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER3_ARMRU1.493e-6061.62Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PER2_ARMRU1.950e-6057.79Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PERN_ARMRU1.264e-5957.79Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER59_ARATH2.815e-5958.00Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PERX_TOBAC3.677e-5957.79Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PERE5_ARMRU1.397e-5861.14Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32106B03EF RVDevelopN Citrus clementina cDNA clone C32106B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921531 ID=FC921531; Name=FC921531; organism=Citrus clementina; type=EST; length=695bp
GAGACACACTCACTAATTTCTCTTCAAAAGGAAAATGTCTCCTCTTCGTT
ATCTTCTTGCAGCAGCTGTCCTTTCCGCGTTTGTGCTTGACGAATCATCA
TCTCAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGCCCTAATGC
ATCAAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCC
GAATCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCTTTGTCAAC
GGCTGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGATACGAGCAT
AGACAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAGAGGTTTCG
AAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTCCTGGCATT
GTTTCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCCGTCAATTT
GTCAGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGACGGCAGGA
CAGCGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCATTTCAGACT
CTTGATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAACGACAATAC
TGATCTGGTTGCACTCTCCGGCGCTCACACTTTTGGAAGGGCACAGTGTC
AATTTTTCAGCCAAAGATTATTTCATTTCAATGGAACTGGCAATC
back to top