FC921531

Overview
NameFC921531
Unique NameFC921531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10344 contig Ccv1_Contig10344:9..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 9.721e-44
Identity = 88/195 (45.13%), Postives = 123/195 (63.08%), Query Frame = 2
Query:   89 DESSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLF 673
            D       LT D+Y +TCP   ++I   ++     D R  A +IRLHFHDCFV GCDGS+LLD      ++  EK +  N NS +G+++VD +K  +ES CPG+VSCAD+L I +  +  L GGP W VP+GR+D +TA+  LA  NLPTP + L  +  +F + GL+   D+VAL GAHT G+AQC+ F  R++
Sbjct:   22 DTPGKDLPLTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETE---TLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVE-DMVALIGAHTIGKAQCRNFRSRIY 212          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER57_ARATH (Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.075e-42
Identity = 91/195 (46.67%), Postives = 123/195 (63.08%), Query Frame = 2
Query:  107 AQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            AQL   FY+ +CP A  I+  +++  F     +TA+L+R+HFHDCFV GCD S+L+D      S +SEK +   N S R F+++D +KA LE+ACP  VSCADI+ +A+  SV L+GGPS+++P GRRDGR +N    D  LP P  ++      FTN G+N   D VAL GAHT G+  C  FS R+  F GTG
Sbjct:   22 AQLRVGFYSQSCPQAETIVRNLVRQRFGVTPTVTAALLRMHFHDCFVKGCDASLLID------STNSEK-TAGPNGSVREFDLIDRIKAQLEAACPSTVSCADIVTLATRDSVALAGGPSYSIPTGRRDGRVSNN--LDVTLPGPTISVSGAVSLFTNKGMN-TFDAVALLGAHTVGQGNCGLFSDRITSFQGTG 206          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PERN1_TOBAC (Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.127e-42
Identity = 87/189 (46.03%), Postives = 124/189 (65.61%), Query Frame = 2
Query:  125 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            FY++TCP A +I+   ++  F SD  +   ++R+HFHDCFV GCDGSIL++        D+E+ ++ N N  +GF+V++  K  +E+ CPG+VSCADILA+A+  SV  + G +W+VP GRRDGR  +R+    +LP  F ++D+ K +F   GLN   DLVAL+GAHT G A C     RLF+FN TG
Sbjct:   36 FYSSTCPRAESIVQSTVRAHFQSDPTVAPGILRMHFHDCFVLGCDGSILIEGS------DAERTAIPNRN-LKGFDVIEDAKTQIEAICPGVVSCADILALAARDSVVATRGLTWSVPTGRRDGR-VSRAADAGDLPAFFDSVDIQKRKFLTKGLN-TQDLVALTGAHTIGTAGCAVIRDRLFNFNSTG 215          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.127e-42
Identity = 95/194 (48.97%), Postives = 126/194 (64.95%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFH 676
            S++ AQL+  FY+ +CPNA + I   + +A   + R+ ASL+RLHFHDCFV GCD S+LL    NDTS +  +      N  RGF VV+++KA +ES CPGIVSCADILA+A+   V   GGPSWTV LGRRD  TA+ +    +LP P  +L  L   +    LN  TD+VALSGAHT G+AQC  F+  +++
Sbjct:   25 SAASAQLSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLL----NDTSGEQSQGPNLTLNP-RGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TASFAGQTSDLPPPTSSLGQLLSAYNKKNLNP-TDMVALSGAHTIGQAQCSSFNDHIYN 211          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.127e-42
Identity = 94/195 (48.21%), Postives = 125/195 (64.10%), Query Frame = 2
Query:  107 AQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            AQL   FY+ +CPNA  I+  +++  F  D  ITA+L R+HFHDCFV GCD S+L+D     TS  SEK +   N S RGFE++D +K ALE+ CP  VSC+DI+ +A+  +V L GGPS+ VP GRRDG  +N   A++ LP PF +++ +   F N G+N   D VAL GAHT G A C  F  R+ +F GTG
Sbjct:   21 AQLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPT---TSQLSEK-NAGPNFSVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMN-VFDSVALLGAHTVGIASCGNFVDRVTNFQGTG 210          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.334e-42
Identity = 89/190 (46.84%), Postives = 122/190 (64.21%), Query Frame = 2
Query:  113 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFN 682
            L+P +Y+ TCP A +I+   ++ A ++D  + A+L+R+HFHDCFV GCDGS+LLD+   + +   EK    N  S   F V+D  K ALE  CPGIVSCADIL++A+  +V LSGGP+W VP GR+DGR  ++++  + LP P   +  L+  F   GL+ + DLVALSG HT G A C  F  RL  FN
Sbjct:   23 LSPHYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKA---EKDGPPNI-SLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGR-ISKAIETRQLPAPTFNISQLRQNFGQRGLSMH-DLVALSGGHTLGFAHCSSFQNRLHKFN 206          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.334e-42
Identity = 90/193 (46.63%), Postives = 121/193 (62.69%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLF 673
            +++ AQL+P FY+T+CP A   I   +  A  SD R+ ASL+RLHFHDCFV GCD S+LL  +        E+ ++ N  S RGF V+D++K  +E+ C   VSCADIL +A+  SV   GGPSWTVPLGRRD   AN + A+ +LP    +   L+  F   G  +  D+VALSGAHT G+AQC  F  R++
Sbjct:   17 TAASAQLSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSGM--------EQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIY 201          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.027e-41
Identity = 92/194 (47.42%), Postives = 126/194 (64.95%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFH 676
            S++ AQL+  FY+T+CP+A + I   + +A     R+ ASL+RLHFHDCF+ GCD SILL    NDTS +  +      N  R F+VV+++KA +E+ACPG+VSCADILA+A+   V   GGPSWTV LGRRD  T +      +LP P  +L  L   ++   L D TD+VALSGAHT G+AQC  F+  +++
Sbjct:   25 STASAQLSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILL----NDTSGEQTQPPNLTLNP-RAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDS-TGSFPSQTSDLPPPTSSLQALLAAYSKKNL-DATDMVALSGAHTIGQAQCSSFNGHIYN 211          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.457e-41
Identity = 93/193 (48.19%), Postives = 120/193 (62.18%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLF 673
            +++  QL+  FY+T+CP A   I   +  A +SD R+ ASL+RLHFHDCF  GCD S+LL  +        E+ +  N  S RGF V+D +K  LES C   VSCADIL +A+  SV   GGPSWTVPLGRRD  TA+ SLA+ +LP P  +   L+  F    LN   D+VALSGAHT G+AQC  F  R++
Sbjct:   19 TAASGQLSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLLTGM--------EQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLN-TVDMVALSGAHTIGKAQCSNFRTRIY 200          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 3.457e-41
Identity = 90/194 (46.39%), Postives = 124/194 (63.92%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFH 676
            ++++AQL   FY+T+CPNA  ++   +  AF  D  I A LIRLHFHDCFV GCDGS+LL    N     +E+ ++ NN S RGF+V+DA K A+E +CP  VSCADI+A A+  S++L+G  S+ VP GRRDGR +N +    +LP P  T   L   F    L+   D+V LSGAHT GR+ C  F +R+++
Sbjct:   29 ATARAQLRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLL--TVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSN-ATETVDLPPPTSTAQSLTDLFKAKELSVE-DMVVLSGAHTVGRSFCASFFKRVWN 218          
The following BLAST results are available for this feature:
BLAST of FC921531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER11_ARATH9.721e-4445.13Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER57_ARATH1.075e-4246.67Peroxidase 57 OS=Arabidopsis thaliana GN=PER57 PE=... [more]
PERN1_TOBAC3.127e-4246.03Peroxidase N1 OS=Nicotiana tabacum GN=poxN1 PE=1 S... [more]
PER66_MAIZE3.127e-4248.97Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER28_ARATH3.127e-4248.21Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER64_ARATH5.334e-4246.84Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER1_HORVU5.334e-4246.63Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER42_MAIZE2.027e-4147.42Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER1_WHEAT3.457e-4148.19Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER1_MAIZE3.457e-4146.39Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC32106B03EF RVDevelopN Citrus clementina cDNA clone C32106B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921531 ID=FC921531; Name=FC921531; organism=Citrus clementina; type=EST; length=695bp
GAGACACACTCACTAATTTCTCTTCAAAAGGAAAATGTCTCCTCTTCGTT
ATCTTCTTGCAGCAGCTGTCCTTTCCGCGTTTGTGCTTGACGAATCATCA
TCTCAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGCCCTAATGC
ATCAAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCC
GAATCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCTTTGTCAAC
GGCTGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGATACGAGCAT
AGACAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAGAGGTTTCG
AAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTCCTGGCATT
GTTTCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCCGTCAATTT
GTCAGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGACGGCAGGA
CAGCGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCATTTCAGACT
CTTGATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAACGACAATAC
TGATCTGGTTGCACTCTCCGGCGCTCACACTTTTGGAAGGGCACAGTGTC
AATTTTTCAGCCAAAGATTATTTCATTTCAATGGAACTGGCAATC
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