FC921531

Overview
NameFC921531
Unique NameFC921531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41
Identity = 86/187 (45.99%), Postives = 119/187 (63.64%), Query Frame = 2
Query:  125 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNG 685
            FY+TTCPNA  I+   + + F SD ++   L+R+H HDCFV GCDGS+LL         +SE+ + AN N   GFEV+D  K  LE+ACPG+VSCADILA+A+  SV+L+ G SW VP GRRDGR +  S  + NLP+P  +L + + +F+   LN    +  + G HT G A C F + R+F+ +G
Sbjct:   29 FYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGP------NSERTAGANVN-LHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVN-NLPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFITNRIFNSSG 207          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41
Identity = 92/193 (47.67%), Postives = 123/193 (63.73%), Query Frame = 2
Query:   98 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFH 676
            S  AQL+  FY+TTCP A + I   ++++ +S+ R  A +IRL FHDCFV GCD S+LL          SE+ S AN+    G+EV+DA KAA+E  CPG+VSCADILA+A+  +    GGPSWTV LGRRD  T+N + A  +LP     L  L   F N GLN   ++VALSG+HT G+A+C  F  R+++
Sbjct:   27 SCNAQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG------SERASPANDG-VLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLN-TREMVALSGSHTLGQARCIRFRGRIYN 211          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41
Identity = 92/201 (45.77%), Postives = 121/201 (60.20%), Query Frame = 2
Query:   92 ESSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTGN 694
            +++SQ  L   FY+ TCP    I+  V+ +A N    + A L+R+ FHDCFV GCDGS+LLD   N      EK S   N S RGF ++D  KAALE  CPGIVSC+DILA+ +  ++    GPSW V  GRRDGR +N  + + NLP+PF  +  L   F + GLN+  DLV LSG HT G   C   + RL++F G G+
Sbjct:   20 QANSQG-LKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNNQ----GEK-SAVPNLSLRGFGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVSN--INEVNLPSPFDNITKLISDFRSKGLNEK-DLVILSGGHTIGMGHCPLLTNRLYNFTGKGD 211          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41
Identity = 92/193 (47.67%), Postives = 123/193 (63.73%), Query Frame = 2
Query:   98 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFH 676
            S  AQL+  FY+TTCP A + I   ++++ +S+ R  A +IRL FHDCFV GCD S+LL          SE+ S AN+    G+EV+DA KAA+E  CPG+VSCADILA+A+  +    GGPSWTV LGRRD  T+N + A  +LP     L  L   F N GLN   ++VALSG+HT G+A+C  F  R+++
Sbjct:   27 SCNAQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAG------SERASPANDG-VLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLN-TREMVALSGSHTLGQARCIRFRGRIYN 211          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.314e-40
Identity = 89/187 (47.59%), Postives = 118/187 (63.10%), Query Frame = 2
Query:  125 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNG 685
            FY TTCP A  I+   +   F+SD RI   ++R+HFHDCFV GCDGSIL+         ++E+ +  N N  +GFEV+D  K  LE+ACPG+VSCADILA+A+  +V L+ G  W VP GRRDGR +  S A+ NLP P  ++ + + +F+ +GLN   DLV L G HT G A C  F  RLF+  G
Sbjct:   39 FYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGA------NTERTAGPNLN-LQGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNAN-NLPGPRDSVAVQQQKFSALGLN-TRDLVVLVGGHTIGTAGCGVFRNRLFNTTG 216          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER20_ARATH (Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.314e-40
Identity = 95/190 (50.00%), Postives = 119/190 (62.63%), Query Frame = 2
Query:  113 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFN 682
            L   FY  +CP A  I+   ++ A   D R+ ASL+RL FHDCFV GCD S+LLD   +   + SEK +  N NS RGFEV+D +K  LE ACP  VSC+DILA+A+  SV L GGP W V LGRRD   A+ + A+Q +P P  +LD L   F   GLN   DL+ALSGAHT G+A+C  F QR+   N
Sbjct:   30 LLKGFYKESCPLAEEIVKHNIEVAVLKDPRMAASLLRLQFHDCFVLGCDASVLLDTHGD---MLSEKQATPNLNSLRGFEVIDYIKYLLEEACPLTVSCSDILALAARDSVFLRGGPWWEVLLGRRDSLKASFAGANQFIPAPNSSLDSLIINFKQQGLNIQ-DLIALSGAHTIGKARCVSFKQRIVQPN 215          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.716e-40
Identity = 86/193 (44.56%), Postives = 122/193 (63.21%), Query Frame = 2
Query:  113 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            L P FY+ TCP A +I+   ++ A   + R  AS++R  FHDCFVNGCD S+LLD+  N   +  EK S++N +S R FEVVD +K ALE ACP  VSCADI+ +A+  +V L+GGP W V LGR+D  TA++  +D  +P+P      L   F    L+   D+VALSG+H+ G+ +C     RL++ +G+G
Sbjct:   23 LRPRFYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPN---MLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVK-DMVALSGSHSIGQGRCFSIMFRLYNQSGSG 211          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 164.466 bits (415), Expect = 4.992e-40
Identity = 89/199 (44.72%), Postives = 117/199 (58.79%), Query Frame = 2
Query:   98 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTGN 694
            +S AQL   FY+ +CP+   ++   +  A  +   +   L+R+HFHDCFV GCDGS+LLD+  N T+   EK     N + RGF  V+ +KAA+E ACPG VSCAD+LA+ +  +V LS GP W VPLGRRDGR +  +  DQ LP P      L   F    L D  DLV LS  HT G + C  F+ RL++F G  N
Sbjct:   19 ASSAQLDEKFYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTA---EK-DATPNQTLRGFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRVSIANETDQ-LPPPTANFTELTQMFAAKNL-DLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDN 211          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 8.516e-40
Identity = 82/200 (41.00%), Postives = 124/200 (62.00%), Query Frame = 2
Query:   92 ESSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            E   ++ L  D+Y  +CP A  II   +++ +N    +   +IRL FHDCF+ GCD S+LLD    D +  SEK   + N S +GF+V+DA+K+ LE+ CPG+VSCAD+L +A+ ++V ++GGP + +  GR+D   A R  A+  LP P  TL ++  RF+  G N+  + V+L GAH+ G   C FF  RL++F+ TG
Sbjct:   61 EDIDRSYLHYDYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDA---DEAHTSEK-DASPNLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNER-ETVSLFGAHSIGITHCTFFKNRLYNFSATG 255          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.230e-38
Identity = 85/190 (44.74%), Postives = 115/190 (60.53%), Query Frame = 2
Query:  125 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTGN 694
            FY+  CP A  I+   +  A  +D  I A L+R+ FHDCFV GC+GS+LL+      +   EK S+ N  + RGFE++D +KAALE  CPGIVSC+D+LA+ +  ++    GPSW V  GRRDG   N + A  NLP+PF  +  L  +F + GL D  DLV LSG HT G   C   + RL++F G G+
Sbjct:   36 FYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLEL----KNKKDEKNSIPNL-TLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGL-DKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGD 219          
The following BLAST results are available for this feature:
BLAST of FC921531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER62_ARATH5.897e-4145.99Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER2_ZINEL5.897e-4147.67Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER27_ARATH5.897e-4145.77Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER1_ZINEL5.897e-4147.67Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER71_ARATH1.314e-4047.59Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER20_ARATH1.314e-4050.00Peroxidase 20 OS=Arabidopsis thaliana GN=PER20 PE=... [more]
PER17_ARATH1.716e-4044.56Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER1_ORYSJ4.992e-4044.72Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER48_ARATH8.516e-4041.00Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER56_ARATH1.230e-3844.74Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32106B03EF RVDevelopN Citrus clementina cDNA clone C32106B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921531 ID=FC921531; Name=FC921531; organism=Citrus clementina; type=EST; length=695bp
GAGACACACTCACTAATTTCTCTTCAAAAGGAAAATGTCTCCTCTTCGTT
ATCTTCTTGCAGCAGCTGTCCTTTCCGCGTTTGTGCTTGACGAATCATCA
TCTCAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGCCCTAATGC
ATCAAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCC
GAATCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCTTTGTCAAC
GGCTGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGATACGAGCAT
AGACAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAGAGGTTTCG
AAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTCCTGGCATT
GTTTCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCCGTCAATTT
GTCAGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGACGGCAGGA
CAGCGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCATTTCAGACT
CTTGATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAACGACAATAC
TGATCTGGTTGCACTCTCCGGCGCTCACACTTTTGGAAGGGCACAGTGTC
AATTTTTCAGCCAAAGATTATTTCATTTCAATGGAACTGGCAATC
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