FC921531

Overview
NameFC921531
Unique NameFC921531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10344 contig Ccv1_Contig10344:9..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER13_ARATH (Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.673e-38
Identity = 91/191 (47.64%), Postives = 119/191 (62.30%), Query Frame = 2
Query:  101 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALS-GAHTFGRAQCQFFSQRL 670
            S AQL   FY+ TCP+A +I+  V+Q A  +D    A L+RL FHDCFV GCDGSIL+ +  N    D E+F+ A N    GF+V+D  K+ LE  CPG+VSCADI+A+A+  ++  + GP + VP GRRDG  AN   A +NLP    +++ LK +F   GL+D  DLV LS GAHT G   C F   RL
Sbjct:   20 SAAQLQFGFYSETCPSAESIVRDVVQQAVTNDPGKAAVLLRLQFHDCFVEGCDGSILIKHGGN----DDERFA-AGNAGVAGFDVIDEAKSELERFCPGVVSCADIVALAARDAIAEAKGPFYEVPTGRRDGLIANVDHA-KNLPDVQDSINTLKSKFREKGLSDQ-DLVLLSAGAHTIGTTACFFVIPRL 203          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 7.970e-38
Identity = 85/191 (44.50%), Postives = 113/191 (59.16%), Query Frame = 2
Query:   98 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRL 670
            S+ AQL   FY+ +CP A +I+  V+ N F SD  ITA+ +R+ FHDCFV GCD S+L+D      S   EK S   N S RG+E++D  K  LE+ACP  VSCADI+ +A+  SV L+GGP ++VP GRRDG  +N +  D NLP P   +      F   G+N N  +  + G H+ G A C  F  RL
Sbjct:   17 SALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPS---EK-STGPNASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTGRRDGLRSNPN--DVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL 201          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.564e-36
Identity = 87/189 (46.03%), Postives = 109/189 (57.67%), Query Frame = 2
Query:  125 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            FY   C N  +I+  V+Q+   S       ++R+HFHDCFV+GCDGS+LL   A +TS    + +   N S RGFEV++  KA LE ACP  VSCADIL +A+  +V L+GG  W VPLGR DGR +  S  D NLP P  ++   K  F    LN   DLV L G HT G A C     R  +FNGTG
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL---AGNTS----ERTAVPNRSLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQAS--DVNLPGPSDSVAKQKQDFAAKTLN-TLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTG 219          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER12_ARATH (Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.662e-35
Identity = 84/189 (44.44%), Postives = 112/189 (59.26%), Query Frame = 2
Query:  113 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMAN-NNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRT-ANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLF 673
            L+ +FY   CP   NII   L+  F  DI + A+++R+HFHDCFV GC+ S+LL   A   S   E+ S+ N     + F V++ ++A ++  C  +VSC+DILA+A+  SV LSGGP + VPLGRRD    A++     NLP PF     L   F N  LN  TDLVALSG HT G A C  F+ RL+
Sbjct:   44 LSWNFYQKACPKVENIIRKELKKVFKRDIGLAAAILRIHFHDCFVQGCEASVLL---AGSASGPGEQSSIPNLTLRQQAFVVINNLRALVQKKCGQVVSCSDILALAARDSVVLSGGPDYAVPLGRRDSLAFASQETTLNNLPPPFFNASQLIADFANRNLN-ITDLVALSGGHTIGIAHCPSFTDRLY 228          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35
Identity = 85/194 (43.81%), Postives = 116/194 (59.79%), Query Frame = 2
Query:  101 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFN 682
            S+A L   +Y+ +CP A  IIL  ++NA   D ++ A L+R+ FHDCF+ GCD SILLD+  ++    +EK    N  S R F V++  K  LE ACP  VSCAD++AIA+   V LSGGP W+V  GR+DG T +R+   +NLP P   +  L   F   GL+   D+V LSG HT G + C  F  RL +F+
Sbjct:   22 SEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSN---QAEKDGPPNI-SVRSFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDG-TISRANETRNLPPPTFNVSQLIQSFAARGLSVK-DMVTLSGGHTIGFSHCSSFESRLQNFS 209          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.835e-35
Identity = 82/186 (44.09%), Postives = 115/186 (61.83%), Query Frame = 2
Query:  113 LTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRL 670
            L+  +Y  +CP A  I+   + NA  +D  + A LIR+ FHDCF+ GCD SILLD+  ++T+   EK S AN  S RG+E++D  K  +E+ CPG+VSCADI+A+A+  +V  +GGP + +P GR DG+  ++    +NLP+PF     L   F   G     D+VALSGAHT G A+C  F  RL
Sbjct:   26 LSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTA---EKDSPANL-SLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGK-RSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQ-DVVALSGAHTLGVARCSSFKARL 205          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.315e-35
Identity = 85/201 (42.29%), Postives = 114/201 (56.72%), Query Frame = 2
Query:  101 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSA-RGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTGN 694
            S AQL  DFY  TCPN   I+   +Q           + +RL+FHDCFVNGCD S++   +A+  +  +EK    N + A  GF+ V   K A+++   C   VSCADIL +A+   VNL+GGP + V LGRRDG +++ S     LP P   L+ L   F   GL+ N D++ALSGAHT G A C     RL++FN T N
Sbjct:   23 SSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVM---IASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPN-DMIALSGAHTLGFAHCTKVFNRLYNFNKTNN 219          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER45_ARATH (Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.346e-34
Identity = 82/200 (41.00%), Postives = 115/200 (57.50%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGT 688
            S   AQL   FY  +CPN   I+   ++  F        + +RL FHDCFV GCD SI++ + +     D    S+A +    GF+ V   K A++S   C   VSCADILA+A+ + V L+GGPS+ V LGRRDGR + ++     LP P   L+ L G F+  GL+  TD++ALSGAHT G A C   S+R+++F+ T
Sbjct:   21 SCVSAQLRTGFYQNSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASIMIASPSERDHPDD--MSLAGD----GFDTVVKAKQAVDSNPNCRNKVSCADILALATREVVVLTGGPSYPVELGRRDGRISTKASVQSQLPQPEFNLNQLNGMFSRHGLS-QTDMIALSGAHTIGFAHCGKMSKRIYNFSPT 213          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.346e-34
Identity = 79/198 (39.90%), Postives = 113/198 (57.07%), Query Frame = 2
Query:  104 QAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLS-GGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTGN 694
            + +L  +FY+ +CP A +I+  ++     ++  +   L+R+H+HDCFV GCD S+LLD+VA     + E      N S  GFE++D +K  LE  CP  VSCADIL +A+  +V+     P W V  GR DGR +  + A ++LP+       L+  F    L D  DLVALSGAHT G A C  F +RL +F G G+
Sbjct:   43 EGKLKMNFYHNSCPGAEDIVRQIVWKKVEANRSLAPKLLRVHYHDCFVRGCDASLLLDSVAGKAVSEKE---ARPNLSLSGFEIIDEIKYILEKRCPNTVSCADILTLAARDAVSYEFERPLWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDL-DVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGD 236          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34
Identity = 79/197 (40.10%), Postives = 114/197 (57.87%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSE-KFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFN 682
            + S AQL+ ++Y +TCP+   I+   +   F   +    + +R+ FHDCFV GCD S+ + +   D   D++   S+A +    GF+ V   K A+ES CPG+VSCADILA+A+   V L GGP + V LGRRDG  +  S     LP P   +  L   F + GL+  TD++ALSGAHT G + C  F+ RL +F+
Sbjct:   26 AESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENEDAEKDADDNKSLAGD----GFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLS-LTDMIALSGAHTIGSSHCNRFANRLHNFS 217          
The following BLAST results are available for this feature:
BLAST of FC921531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER13_ARATH4.673e-3847.64Peroxidase 13 OS=Arabidopsis thaliana GN=PER13 PE=... [more]
PER44_ARATH7.970e-3844.50Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER69_ARATH2.564e-3646.03Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER12_ARATH1.662e-3544.44Peroxidase 12 OS=Arabidopsis thaliana GN=PER12 PE=... [more]
PER66_ARATH2.835e-3543.81Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER47_ARATH2.835e-3544.09Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER51_ARATH6.315e-3542.29Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER45_ARATH5.346e-3441.00Peroxidase 45 OS=Arabidopsis thaliana GN=PER45 PE=... [more]
PER24_ARATH5.346e-3439.90Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER55_ARATH6.982e-3440.10Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32106B03EF RVDevelopN Citrus clementina cDNA clone C32106B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921531 ID=FC921531; Name=FC921531; organism=Citrus clementina; type=EST; length=695bp
GAGACACACTCACTAATTTCTCTTCAAAAGGAAAATGTCTCCTCTTCGTT
ATCTTCTTGCAGCAGCTGTCCTTTCCGCGTTTGTGCTTGACGAATCATCA
TCTCAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGCCCTAATGC
ATCAAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCC
GAATCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCTTTGTCAAC
GGCTGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGATACGAGCAT
AGACAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAGAGGTTTCG
AAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTCCTGGCATT
GTTTCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCCGTCAATTT
GTCAGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGACGGCAGGA
CAGCGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCATTTCAGACT
CTTGATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAACGACAATAC
TGATCTGGTTGCACTCTCCGGCGCTCACACTTTTGGAAGGGCACAGTGTC
AATTTTTCAGCCAAAGATTATTTCATTTCAATGGAACTGGCAATC
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