FC921531

Overview
NameFC921531
Unique NameFC921531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10344 contig Ccv1_Contig10344:9..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.982e-34
Identity = 83/200 (41.50%), Postives = 116/200 (58.00%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTGN 694
            SSS A+L+ +FY  +CP A  I+   +++A +SD  +   L+RL FHDCFV GCDGS+L+     + S          N S  GF V++++K  LE  CPG VSCADIL +A+  +V   GGP   +P GRRDGR +  +    N+     T+D +   F++ GL+ + DLV LSGAHT G A C  F+ R F  +  GN
Sbjct:   25 SSSVAELSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSDPG-------NASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMAANVRPNIIDTDFTVDKMINIFSSKGLSVH-DLVVLSGAHTIGAAHCNTFNSR-FKLDPKGN 215          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 9.119e-34
Identity = 84/198 (42.42%), Postives = 114/198 (57.58%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFN 682
            SS  AQL  +FY  +CPN   I+   ++  F        + +RL FHDCFV GCD SILL + +     D +  S+A +    GF+ V   K AL+    C   VSCADILA+A+   V L+GGP++ V LGRRDGR +  +    +LP P   LD L   F   GL+  TD++ALSGAHT G A C  FS+R+++F+
Sbjct:   19 SSVFAQLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPSEKDHPDDK--SLAGD----GFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLS-QTDMIALSGAHTIGFAHCGKFSKRIYNFS 209          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.191e-33
Identity = 79/190 (41.58%), Postives = 113/190 (59.47%), Query Frame = 2
Query:  125 FYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTGN 694
            +Y + C N  +I+  V+++ + ++      ++R+HFHDCFV GCD S+LL         +SE+ ++ N  S RGF V++  K  LE ACP  VSCADILA+A+   V+L+GGP W VPLGR DGR +  S  +  LP P  ++ + K RF    LN   DLV L+  HT G A C  F  R F+++ TG+
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLL------AGPNSERTAIPNL-SLRGFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLAS--NVILPGPTDSVAVQKLRFAEKNLN-TQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGS 217          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.556e-33
Identity = 79/164 (48.17%), Postives = 108/164 (65.85%), Query Frame = 2
Query:  161 ILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 649
            + GV+ +A +++ R+ ASLIRLHFHDCFV+GCDG ILLD++  + +   E+ S  NNNS RGFEV+   K ++  +CP I VSCADILAIA+  S+   GG ++TV LGR D  TAN S A   LP P   L +   +F++       ++VAL+GAHT G A+C
Sbjct:   85 VKGVVDSAIDNETRMGASLIRLHFHDCFVDGCDGGILLDDI--NGTFTGEQNSPPNNNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVR-EMVALAGAHTVGFARC 245          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER1_SOLLC (Suberization-associated anionic peroxidase 1 OS=Solanum lycopersicum GN=TAP1 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.032e-33
Identity = 83/181 (45.86%), Postives = 116/181 (64.09%), Query Frame = 2
Query:  110 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 649
            QLTP+     C    + +  V+ +A +++ R+ ASLIRLHFHDCFV+GCDG ILLD++  + +   E+ S  N NSARG+EV+   K ++ + CP + VSCADILAIA+  SV   GG +++V LGR D RTAN S A   LP PF  L +   +F++       ++VAL+GAHT G A+C
Sbjct:   75 QLTPE----AC--VFSAVRAVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDI--NGTFTGEQNSPPNANSARGYEVIAQAKQSVINTCPNVSVSCADILAIAARDSVAKLGGQTYSVALGRSDARTANFSGAINQLPAPFDNLTVQIQKFSDKNFT-LREMVALAGAHTVGFARC 246          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PERX_SOLTU (Suberization-associated anionic peroxidase OS=Solanum tuberosum PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 2.653e-33
Identity = 84/181 (46.41%), Postives = 114/181 (62.98%), Query Frame = 2
Query:  110 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 649
            QLTP+     C    + + GV+ +A +++ R+ ASLIRLHFHDCFV+GCDG ILLD++  + +   E+ S  N NSARG+EV+   K ++   CP I VSCADILAIA+  SV   GG ++ V LGR D RTAN + A   LP PF  L +   +F +       ++VAL+GAHT G A+C
Sbjct:   74 QLTPE----AC--VFSAVRGVVDSAIDAETRMGASLIRLHFHDCFVDGCDGGILLDDI--NGTFTGEQNSPPNANSARGYEVIAQAKQSVIDTCPNISVSCADILAIAARDSVAKLGGQTYNVALGRSDARTANFTGALTQLPAPFDNLTVQIQKFNDKNFT-LREMVALAGAHTVGFARC 245          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER8_ARATH (Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.465e-33
Identity = 79/188 (42.02%), Postives = 108/188 (57.45%), Query Frame = 2
Query:  107 AQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRL 670
            AQL   FY  TCP A +I+  V+ N ++ +  +TA+L+R+ FHDC V GCD S+L+D     T   SEK S+  N   RGFE++D  K  LE  CP  VSCADI+ IA+  S+ L+GGP + V  GRRDG  +N S  D  L  P  ++      F ++G N +T +  + G HT G A C  F  R+
Sbjct:   20 AQLRHGFYEGTCPPAESIVGRVVFNHWDRNRTVTAALLRMQFHDCVVKGCDASLLIDPT---TERPSEK-SVGRNAGVRGFEIIDEAKKELELVCPKTVSCADIVTIATRDSIALAGGPKFKVRTGRRDGLRSNPS--DVKLLGPTVSVATSIKAFKSIGFNVSTMVALIGGGHTVGVAHCSLFQDRI 201          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.465e-33
Identity = 78/198 (39.39%), Postives = 115/198 (58.08%), Query Frame = 2
Query:   98 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            ++++ LT DFY+ +CP   +II   + N   S     A+ +RL FHDCF NGCD S+L+ + A +T+      +++      GF+VV   K ALE ACP  VSC+DI+A+A    +   GGP + + LGRRD RT+  SL    LP P   +  L  +F++ G +   ++VALSGAHT G + C+ F+ R+   N TG
Sbjct:   27 AAESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGD--GFDVVIRAKTALELACPNTVSCSDIIAVAVRDLLVTVGGPYYEISLGRRDSRTSKSSLVSDLLPLPSMQISKLIDQFSSRGFSVQ-EMVALSGAHTIGFSHCKEFTNRVNPNNSTG 221          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.720e-33
Identity = 81/195 (41.54%), Postives = 112/195 (57.44%), Query Frame = 2
Query:  110 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGG--PSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGT 688
            QL   FY+  C N  NI+  V+  AF  D  I  ++IRL+FHDCF NGCD S+LLD        +SEK   + N S RG+EV+D +K+A+E  C  +VSCADI+A+A+   V L+ G    + +P GR DG+ ++  L D  LP+P  T+     +F    L+ N D+V L G HT G   C F   RL++F  T
Sbjct:   27 QLRLGFYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLD------GSNSEK-KASPNLSVRGYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVD--LPSPKMTVAETAAKFDQRKLSLN-DMVLLLGGHTIGVTHCSFIMDRLYNFQNT 211          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER46_ARATH (Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.246e-32
Identity = 79/199 (39.70%), Postives = 115/199 (57.79%), Query Frame = 2
Query:   98 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTGN 694
            +S A L+ +FY ++C  A  ++   +++A +SD  I   L+RL FHDCFV GCD S+L+         +S + S   N S  GF V+D  K A+E+ CP  VSCADI+A+A+  +V  +GGP   +P GRRDG+ +  +    N+     TLD +   F++ GL+   DLV LSGAHT G + C  F+ R F  +  GN
Sbjct:   24 TSSANLSFNFYASSCSVAEFLVRNTVRSATSSDPTIPGKLLRLFFHDCFVQGCDASVLIQG-------NSTEKSDPGNASLGGFSVIDTAKNAIENLCPATVSCADIVALAARDAVEAAGGPVVEIPTGRRDGKESMAANVRPNIIDTDFTLDQMIDAFSSKGLSIQ-DLVVLSGAHTIGASHCNAFNGR-FQRDSKGN 213          
The following BLAST results are available for this feature:
BLAST of FC921531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER18_ARATH6.982e-3441.50Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER16_ARATH9.119e-3442.42Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER70_ARATH1.191e-3341.58Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]
PER2_SOLLC1.556e-3348.17Suberization-associated anionic peroxidase 2 OS=So... [more]
PER1_SOLLC2.032e-3345.86Suberization-associated anionic peroxidase 1 OS=So... [more]
PERX_SOLTU2.653e-3346.41Suberization-associated anionic peroxidase OS=Sola... [more]
PER8_ARATH3.465e-3342.02Peroxidase 8 OS=Arabidopsis thaliana GN=PER8 PE=2 ... [more]
PER63_ARATH3.465e-3339.39Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]
PER60_ARATH7.720e-3341.54Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER46_ARATH2.246e-3239.70Peroxidase 46 OS=Arabidopsis thaliana GN=PER46 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32106B03EF RVDevelopN Citrus clementina cDNA clone C32106B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921531 ID=FC921531; Name=FC921531; organism=Citrus clementina; type=EST; length=695bp
GAGACACACTCACTAATTTCTCTTCAAAAGGAAAATGTCTCCTCTTCGTT
ATCTTCTTGCAGCAGCTGTCCTTTCCGCGTTTGTGCTTGACGAATCATCA
TCTCAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGCCCTAATGC
ATCAAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCC
GAATCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCTTTGTCAAC
GGCTGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGATACGAGCAT
AGACAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAGAGGTTTCG
AAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTCCTGGCATT
GTTTCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCCGTCAATTT
GTCAGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGACGGCAGGA
CAGCGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCATTTCAGACT
CTTGATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAACGACAATAC
TGATCTGGTTGCACTCTCCGGCGCTCACACTTTTGGAAGGGCACAGTGTC
AATTTTTCAGCCAAAGATTATTTCATTTCAATGGAACTGGCAATC
back to top