FC921531

Overview
NameFC921531
Unique NameFC921531
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10344 contig Ccv1_Contig10344:9..703. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 87/196 (44.39%), Postives = 115/196 (58.67%), Query Frame = 2
Query:   92 ESSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIAS-EQSVNLSGGP-SWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC-QFFSQRL 670
            ++S    L   +Y  TCP A  I+   ++ A   +    A++IR+ FHDCFV GCD S+LLD      S   EK +  NN S RGFE++DA+K ALE+ACPG+VSCADI+A A+ + S  LS G  S+ +P GR DG  +N S + + L  P   L  L   F   G++   DLV LSGAHT GR+ C  F S RL
Sbjct:   28 QASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLD--PTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMS-LEDLVVLSGAHTVGRSHCSSFVSDRL 220          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER26_ARATH (Probable peroxidase 26 OS=Arabidopsis thaliana GN=PER26 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.934e-32
Identity = 78/199 (39.20%), Postives = 115/199 (57.79%), Query Frame = 2
Query:  101 SQAQLTPDFYNT--TCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            S  +LT  +Y    TC NA N +   ++  + +D  I   L+RL + DCFV+GCD S+LL+        +SEK +   N    GF ++D +K  LE  CPG+VSCADIL +A+  +V+L+G PS+ V  GRRDG T+++   D  LP+P  + D     F + GLN   D+  L G+H+ GR  C +   RL+++N TG
Sbjct:   31 SMQKLTWHYYKVYNTCENAENFVRHQVEIFYKNDKSIAPKLLRLLYSDCFVSGCDASVLLEGP------NSEKMA-PQNRGLGGFVLIDKIKIVLEQRCPGVVSCADILNLATRDAVHLAGAPSYPVFTGRRDGLTSDKQTVD--LPSPSISWDQAMSYFKSRGLN-VLDMATLLGSHSMGRTHCSYVVDRLYNYNKTG 219          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31
Identity = 71/161 (44.10%), Postives = 102/161 (63.35%), Query Frame = 2
Query:  170 VLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGI-VSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQC 649
            ++  A  ++ R+ ASLIRLHFHDCFV+GCDG ILL++ AN T    E+ + AN+NS RGF V+D  K   ++ C    VSCAD+LAIA+  +       ++ + LGR+D RTAN + A+  LP PF  L +   +F + G N   ++V L+GAHT G ++C
Sbjct:   79 IVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFT---GEQGAPANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQR-EMVVLAGAHTVGFSRC 235          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER50_ARATH (Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31
Identity = 78/200 (39.00%), Postives = 110/200 (55.00%), Query Frame = 2
Query:  101 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTS--IDSEKFSMANNNSARGFEVVDAMKAALESA--CPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGT 688
            S AQL  +FY  +CPN   I+   +Q           + +RL+FHDCFVNGCD S+++ +  N+ +     E  S+A +    GF+ V   K AL++   C   VSCADIL +A+   VNL+GGP + V LGR DG ++  +     LP P   ++ L   F   GL+ N D++ALSGAHT G A C     R++ FN T
Sbjct:   23 SSAQLRRNFYAGSCPNVEQIVRNAVQKKVQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNNNKAEKDHEENLSLAGD----GFDTVIKAKEALDAVPNCRNKVSCADILTMATRDVVNLAGGPQYDVELGRLDGLSSTAASVGGKLPHPTDDVNKLTSLFAKNGLSLN-DMIALSGAHTLGFAHCTKVFNRIYTFNKT 217          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.901e-31
Identity = 78/200 (39.00%), Postives = 109/200 (54.50%), Query Frame = 2
Query:   98 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDS--EKFSMANNNSARGFEVVDAMKAALES--ACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNG 685
            ++ AQL+  FY+ TCPN   I+   +Q           + +RL FHDCFVNGCD S+++ +   + +     +  S+A +    GF+VV   K AL+S  +C   VSCADIL +A+   V  +GGPS+ V LGR DG  +  S  + NLP P   +D L   FT   L    D++ALS AHT G A C    +R+  FNG
Sbjct:   22 TTTAQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDHPDNISLAGD----GFDVVIQAKKALDSNPSCRNKVSCADILTLATRDVVVAAGGPSYEVELGRFDGLVSTASSVEGNLPGPSDNVDKLNALFTKNKLTQE-DMIALSAAHTLGFAHCGKVFKRIHKFNG 216          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER61_ARATH (Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.243e-31
Identity = 75/185 (40.54%), Postives = 106/185 (57.30%), Query Frame = 2
Query:  137 TCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            TC +A   I   ++  + +D  I   L+RL + DC VNGCDGSILL         +SE+ +   N    GF ++D +K  LES CPG+VSCADIL +A+  +V+++G PS+ V  GRRDG T N    D  LP+P  ++D     F + GL D  D+  L GAH+ G+  C +   RL++F  TG
Sbjct:   45 TCDDAETYIRYQVEKFYKNDSSIAPKLLRLLYSDCMVNGCDGSILLQGP------NSER-TAPQNRGLGGFVIIDKIKQVLESRCPGVVSCADILNLATRDAVHMAGAPSYPVFTGRRDGGTLNADAVD--LPSPSISVDESLAYFKSKGL-DVLDMTTLLGAHSMGKTHCSYVVDRLYNFKNTG 219          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.236e-31
Identity = 76/198 (38.38%), Postives = 116/198 (58.59%), Query Frame = 2
Query:   98 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGTG 691
            ++Q++LT +FY+ TCP   +II   + N   ++    A++IRL FHDCF NGCD S+L+ + A +T+      +++      GF+V+   K ALE ACP  VSC+DI+++A+   +   GGP + V LGRRD RT+  SL    LP P   +  +  +F + G     ++VALSGAH+ G + C+ F  R+   N TG
Sbjct:   16 TAQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGD--GFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQ-EMVALSGAHSIGFSHCKEFVGRVGR-NNTG 209          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER19_ARATH (Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.236e-31
Identity = 72/193 (37.31%), Postives = 103/193 (53.37%), Query Frame = 2
Query:  110 QLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFHFNGT 688
            +L+ D+Y+  CP    ++  V    F        + IRL FHDCFV GCDGSIL++       +   +          GF+ +   KA +ES CP +VSC+DILAIA+   ++L+GGP + V  GR DG+ +       N+P    T+D L   F + GL    +LV LSG+HT G A C+ F  RL+ + GT
Sbjct:   41 ELSADYYSKKCPQLETLVGSVTSQRFKEVPISAPATIRLFFHDCFVEGCDGSILIETKKGSKKLAEREAYENKELREEGFDSIIKAKALVESHCPSLVSCSDILAIAARDFIHLAGGPYYQVKKGRWDGKRSTAKNVPPNIPRSNSTVDQLIKLFASKGLTVE-ELVVLSGSHTIGFAHCKNFLGRLYDYKGT 232          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER1_SORBI (Cationic peroxidase SPC4 (Fragment) OS=Sorghum bicolor PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.117e-30
Identity = 76/187 (40.64%), Postives = 106/187 (56.68%), Query Frame = 2
Query:   89 DESSSQAQLTP----DFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILLDNVANDTSIDSEKFSMANNNSARGFEVVDAMKAALESACPG-IVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRT-ANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHT 631
            D ++ Q  L P    DFY  +CP A +I+   +Q+A   D+ + A L+RLHFHDCFV GCD S+LLD  A          ++    +A  F+ ++ +   L   C G +VSC+D+LA+A+  SV +SGGPS+ VPLGRRD  + A +      LP P   +  L    + + L D TDLVALSG HT
Sbjct:   29 DGNARQPPLAPGLSFDFYKRSCPKAESIVRSFVQDAVRRDVGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPPNLTLRPTA--FKAINDIHDRLHKECGGTVVSCSDVLALAARDSVVVSGGPSYKVPLGRRDSASFATQQDVLSGLPPPTAAVPALLAVLSKINL-DATDLVALSGGHT 212          
BLAST of FC921531 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.965e-29
Identity = 77/196 (39.29%), Postives = 107/196 (54.59%), Query Frame = 2
Query:   95 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVNGCDGSILL-DNVANDTSIDSEKFSMANNNSARG--FEVVDAMKAALESACPGIVSCADILAIASEQSVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLF 673
            S+  A L  D+Y  TCP+   I+   +           A  +RL FHDCF+ GCD S+L+  N  N    D +      N+S  G  F++V  +K ALE +CPG+VSCADILA A+   V + GGP + V LGR+DG  +       N+P   QT+  + G F   G +   ++VALSGAHT G + C+ FS RL+
Sbjct:   27 SADVAILRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDL-----NDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFS-LREMVALSGAHTIGFSHCKEFSDRLY 216          
The following BLAST results are available for this feature:
BLAST of FC921531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER2_MAIZE2.934e-3244.39Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER26_ARATH2.934e-3239.20Probable peroxidase 26 OS=Arabidopsis thaliana GN=... [more]
PERN_IPOBA1.901e-3144.10Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER50_ARATH1.901e-3139.00Peroxidase 50 OS=Arabidopsis thaliana GN=PER50 PE=... [more]
PER35_ARATH1.901e-3139.00Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER61_ARATH3.243e-3140.54Probable peroxidase 61 OS=Arabidopsis thaliana GN=... [more]
PER31_ARATH4.236e-3138.38Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER19_ARATH4.236e-3137.31Peroxidase 19 OS=Arabidopsis thaliana GN=PER19 PE=... [more]
PER1_SORBI6.117e-3040.64Cationic peroxidase SPC4 (Fragment) OS=Sorghum bic... [more]
PER65_ARATH3.965e-2939.29Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC32106B03EF RVDevelopN Citrus clementina cDNA clone C32106B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921531 ID=FC921531; Name=FC921531; organism=Citrus clementina; type=EST; length=695bp
GAGACACACTCACTAATTTCTCTTCAAAAGGAAAATGTCTCCTCTTCGTT
ATCTTCTTGCAGCAGCTGTCCTTTCCGCGTTTGTGCTTGACGAATCATCA
TCTCAAGCTCAGCTTACGCCAGATTTTTACAACACCACATGCCCTAATGC
ATCAAACATCATTCTGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCC
GAATCACTGCCAGCCTCATCAGGCTTCATTTTCATGACTGCTTTGTCAAC
GGCTGTGATGGGTCAATCTTGCTGGACAACGTTGCCAATGATACGAGCAT
AGACAGCGAGAAATTTTCGATGGCAAATAATAATTCAGCAAGAGGTTTCG
AAGTTGTTGATGCCATGAAAGCAGCCCTTGAGAGTGCCTGTCCTGGCATT
GTTTCCTGTGCTGATATTCTTGCCATTGCTTCTGAACAATCCGTCAATTT
GTCAGGTGGTCCTTCATGGACAGTTCCACTGGGAAGAAGAGACGGCAGGA
CAGCGAACAGGAGCCTTGCAGATCAGAATCTTCCAACACCATTTCAGACT
CTTGATTTGCTCAAAGGCAGATTTACAAATGTCGGTCTCAACGACAATAC
TGATCTGGTTGCACTCTCCGGCGCTCACACTTTTGGAAGGGCACAGTGTC
AATTTTTCAGCCAAAGATTATTTCATTTCAATGGAACTGGCAATC
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