FC921560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 258.07 bits (658), Expect = 3.261e-68 Identity = 127/179 (70.95%), Postives = 155/179 (86.59%), Query Frame = 1 Query: 148 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++L + KIHPTS+ISGYRLA +EA +Y+NE L V ++LG+D L+N AKTSMS K+IG + DFFAN+VV+AV A+K T+ Sbjct: 5 LSVFGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLACKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTD 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA1_MOUSE (T-complex protein 1 subunit alpha A OS=Mus musculus GN=Tcp1 PE=1 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 3.261e-68 Identity = 127/179 (70.95%), Postives = 155/179 (86.59%), Query Frame = 1 Query: 148 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 L + G+R G+ +R+QNVMA ++ANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILK+LEVEHPAAKVL ELA+LQD+EVGDGTTSVVI+AAELLK A++LV+ KIHPTS+ISGYRLA +EA +Y+NE L + ++LG+D L N AKTSMS K+IG + D+FAN+VV+AV AVK T+ Sbjct: 5 LSVFGDRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIINADELGRDCLTNTAKTSMSSKIIGINGDYFANMVVDAVLAVKYTD 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_YEAST (T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae GN=TCP1 PE=1 SV=2) HSP 1 Score: 257.299 bits (656), Expect = 5.563e-68 Identity = 124/182 (68.13%), Postives = 159/182 (87.36%), Query Frame = 1 Query: 139 SQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 S TL + GE+ +G D+R QNV+A AVAN+VKSSLGPVGLDKMLVDDIGD T+TNDGATIL +L+V+HPA K+LVELA+ QDRE+GDGTTSVVI+A+ELLKRAN+LV+NKIHPT+II+G+R+A+REA +++NE L+ V+ LGK++L+N AKTSMS K+IG DSDFF+N+VV+A+ AVK N Sbjct: 10 SDTLFLGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQN 191
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_SCHPO (T-complex protein 1 subunit alpha OS=Schizosaccharomyces pombe GN=cct1 PE=2 SV=1) HSP 1 Score: 255.758 bits (652), Expect = 1.619e-67 Identity = 125/180 (69.44%), Postives = 158/180 (87.78%), Query Frame = 1 Query: 145 TLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 TL + GE+ +G+DVR QNV+A A+AN+VKSSLGPVGLDKMLVDDIGDVT+TNDGATIL +L+VEHPA KVLVELA+ QD+EVGDGTTSVVI+AAELL+RAN+LV+NKIHPT+II+GYRLA+REA K++ + L+ V+ LGK+SL+N AKTSMS K+IG DSDFF+ + V+A+ +VK +N Sbjct: 9 TLFLSGEKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEHPAGKVLVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVKFMTDVLSCSVDSLGKESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSN 188
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2) HSP 1 Score: 248.054 bits (632), Expect = 3.375e-65 Identity = 122/180 (67.78%), Postives = 152/180 (84.44%), Query Frame = 1 Query: 148 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTNH 687 L + G+R GQ +R+QNV A A+ANIVKSSLGPVGLDKMLVDD+GDV +TNDGATILK LEVEHPA KVLVELA+LQD EVGDGTTSVVIVAAELLKRA++LV+ K+HPT+II+GYRLA +EA KY++E ++ + +G+ S+VN AKTSMS K+IG D+DFF LVV+A +AV++ N+ Sbjct: 9 LALTGKRTTGQGIRSQNVTAAVAIANIVKSSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAVRVENN 188
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_DICDI (T-complex protein 1 subunit alpha OS=Dictyostelium discoideum GN=tcp1 PE=2 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 9.191e-63 Identity = 118/185 (63.78%), Postives = 153/185 (82.70%), Query Frame = 1 Query: 133 ISSQTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTNH 687 +S++ L I G+R +G +VR QNV+A A+ANIVK+S GP+GLDKML+D+IG + +TNDGATIL+ +++EHPAAK+LV+L+ELQD+EVGDGTT+VVI+AAELLKRAN+LV K+HPT IISG+RLA EA KY+NE LAVKVE L KD +VN AKTSMS K I DSDFF+ +V+EA+ VK ++ Sbjct: 1 MSNKVLMIDGDRISGNEVRAQNVLAVTAIANIVKTSFGPIGLDKMLIDNIGSIVVTNDGATILQKIDIEHPAAKILVQLSELQDQEVGDGTTTVVILAAELLKRANELVARKVHPTVIISGFRLACTEAIKYINETLAVKVETLPKDFIVNIAKTSMSSKTINDDSDFFSKIVIEAITRVKTIDY 185
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 1.467e-60 Identity = 114/178 (64.04%), Postives = 147/178 (82.58%), Query Frame = 1 Query: 148 LDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMT 681 L + GER +G+ VR QNV+A + AN VK+SLGPVGLDKMLVDD+GDVTITNDGATILK+L+VEHPAAK+LV+LA+LQD EVGDGTTSVVI+AA LLK A++L+ +HPT++I+GYRLA REACKY+ E +A V KLGK L+N A+T+MS KLI D+D F+ + V+A+ AV+++ Sbjct: 2 LTLGGERTSGESVRKQNVLAACSFANFVKTSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQEHMAYDVNKLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAVEVS 179
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSB_DESMO (Thermosome subunit beta (Fragment) OS=Desulfurococcus mobilis GN=thsB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.203e-40 Identity = 83/170 (48.82%), Postives = 123/170 (72.35%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R G+D N++A +A++ ++K++ GP G+DKMLVD +GDVTITNDGATIL E++HPAAK+LV++A+ QD EVGDGT VI+A ELLK A +L+ IHPT IISGYR+AM EA K + +++A ++ ++ L A+TS++ K + +FFA++ V+AV+ V Sbjct: 1 QRTTGRDALRTNILAARAISEMIKTTYGPKGMDKMLVDALGDVTITNDGATILDKAEIQHPAAKMLVQVAKSQDSEVGDGTKRAVILAGELLKYAEELLDKNIHPTVIISGYRMAMEEALK-ILDQMAEPIDLNNEELLRKVARTSLTSKAVHDAREFFADIAVKAVKQV 169
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THS_METKA (Thermosome subunit OS=Methanopyrus kandleri GN=ths PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.908e-40 Identity = 80/170 (47.06%), Postives = 127/170 (74.71%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R G+D + N+MA + VA V+++LGP+G+DKMLVD++GDV +TNDG TIL+ +++EHPAAK++VE+A+ Q+ EVGDGTT+ V++A ELL +A DL++ IHPT I GYR+A+ +A + + E++A +++ +++L AKT+M+ K + D+ A LVV+AV+ V Sbjct: 19 QRFVGRDAQRMNIMAARVVAETVRTTLGPMGMDKMLVDEMGDVVVTNDGVTILEEMDIEHPAAKMVVEVAKTQEDEVGDGTTTAVVLAGELLHKAEDLLQQDIHPTVIARGYRMAVEKA-EEILEEIAEEIDPDDEETLKKIAKTAMTGKGVEKARDYLAELVVKAVKQV 187
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSA_ARCFU (Thermosome subunit alpha OS=Archaeoglobus fulgidus GN=thsA PE=3 SV=1) HSP 1 Score: 162.54 bits (410), Expect = 1.865e-39 Identity = 82/170 (48.24%), Postives = 121/170 (71.18%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R G+D + N+MA + +A VKS+LGP G+DKMLVD +GDV ITNDG TILK ++VEHPAAK+++E+A+ QD EVGDGTT+ V++A ELLK+A +L+ IHPT I GYR+A +A + + E +A+ ++ +++L A T+++ K D ++LVVEAV+ V Sbjct: 17 QRTVGRDAQRMNIMAARVIAEAVKSTLGPKGMDKMLVDSLGDVVITNDGVTILKEMDVEHPAAKMIIEVAKTQDNEVGDGTTTAVVLAGELLKKAEELLDQDIHPTVIARGYRMAANKAVE-ILESIAMDIDVEDEETLKKIAATAITGKHSEYALDHLSSLVVEAVKRV 185 The following BLAST results are available for this feature:
BLAST of FC921560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921560 ID=FC921560; Name=FC921560; organism=Citrus clementina; type=EST; length=689bpback to top |