FC921560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: CH60_CLOK1 (60 kDa chaperonin OS=Clostridium kluyveri (strain NBRC 12016) GN=groL PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.252e-11 Identity = 51/169 (30.18%), Postives = 82/169 (48.52%), Query Frame = 1 Query: 178 QDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHP----AAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +D R + +AN VK +LGP G + +L G ITNDG TI K +E+E P A+++ E+A + GDGTT+ ++A +++ V +P I G ++A+ +A V E V GK+ + A S S + IG L+ +A++ V Sbjct: 9 EDARKKMQEGVDKLANTVKVTLGPKGRNVVLDKKFGSPLITNDGVTIAKEIELEEPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRQGIKIAVDKA---VEEIKKVSRTVNGKEDIARIAAISASDEEIG-------KLIADAMEKV 167
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: CH60_BACHD (60 kDa chaperonin OS=Bacillus halodurans GN=groL PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.252e-11 Identity = 49/169 (28.99%), Postives = 85/169 (50.30%), Query Frame = 1 Query: 178 QDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEV----EHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +D R + +A+ VK +LGP G + +L G ITNDG TI K +E+ E+ AK++ E+A + GDGTT+ ++A +++ V + +P I G A + A + ++ K++ +E GKDS+ A S + +G ++ EA++ V Sbjct: 9 EDARRSMLRGVDKLADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDIAGDGTTTATVLAQAMIREGLKNVTSGANPMVIRKGIEKATQVAVEELS-KISKPIE--GKDSIAQVAAISSADDEVG-------KIIAEAMERV 167
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: CH60_BACA2 (60 kDa chaperonin OS=Bacillus amyloliquefaciens (strain FZB42) GN=groL PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.252e-11 Identity = 48/169 (28.40%), Postives = 86/169 (50.89%), Query Frame = 1 Query: 178 QDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEV----EHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 ++ R + A+A+ VK +LGP G + +L G ITNDG TI K +E+ E+ AK++ E+A + GDGTT+ ++A +++ V +P + G A+ A + + E ++ +E GK+S+ A S + + +G +L+ EA++ V Sbjct: 9 EEARRAMLRGVDALADAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPVGVRKGMEQAVTVAIENLKE-ISKPIE--GKESIAQVAAISAADEEVG-------SLIAEAMERV 167
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: CH60_METAC (60 kDa chaperonin OS=Methanosarcina acetivorans GN=groL PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11 Identity = 46/169 (27.22%), Postives = 80/169 (47.34%), Query Frame = 1 Query: 178 QDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEV----EHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 ++ R + VAN VK +LGP G +++D +TNDG TI K +E+ E+ AK++ E+A GDGTT+ ++A +++ + +P + G A + +Y+ K VE GKD ++ A S + + NL+ +A++ V Sbjct: 10 ENARKTLLTGVDKVANTVKITLGPKGR-YVVLDKSTKPVVTNDGVTIAKEIELHDKFENMGAKLVKEVASRTQDNTGDGTTTATLLAQSMIREGLKNISAGANPIEVKKGIEFATEKVVEYLKNK---SVEVKGKDKIIQVATVS------ANNDEEIGNLITDAMERV 168
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: CH60_BACWK (60 kDa chaperonin OS=Bacillus weihenstephanensis (strain KBAB4) GN=groL PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.165e-11 Identity = 48/169 (28.40%), Postives = 80/169 (47.34%), Query Frame = 1 Query: 178 QDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEV----EHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 ++ R + +AN VK +LGP G + +L G ITNDG TI K +E+ E+ AK++ E+A + GDGTT+ ++A +++ V +P + G A+ A + E A+ GK S+ A S + + +G L+ EA++ V Sbjct: 9 EEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIEKAVTAA---IEELKAISKPIEGKSSIAQVAAISSADEEVG-------QLIAEAMERV 167 The following BLAST results are available for this feature:
BLAST of FC921560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921560 ID=FC921560; Name=FC921560; organism=Citrus clementina; type=EST; length=689bpback to top |