FC921560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THS_METTL (Thermosome subunit OS=Methanococcus thermolithotrophicus GN=ths PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.023e-37 Identity = 77/170 (45.29%), Postives = 121/170 (71.18%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R G+D + N++A + + V+S+LGP G+DKMLVDD+GD+ +TNDG TILK + VEHPAAK+L+E+A+ Q++EVGDGTT+ V++A ELL++A +L+ +HPT +I GY+LA+++A + + E +A+ V+ K+ L A TS++ K + ++VEAV AV Sbjct: 15 KRFMGRDAQRMNILAGRIIGETVRSTLGPKGMDKMLVDDLGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNVHPTIVIKGYQLAVQKAQEVLKE-IAMDVKADDKEILHKIAMTSITGKGAEKAKEKLGEMIVEAVTAV 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSB_THEAC (Thermosome subunit beta OS=Thermoplasma acidophilum GN=thsB PE=1 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.023e-37 Identity = 85/183 (46.45%), Postives = 124/183 (67.76%), Query Frame = 1 Query: 133 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 I+ Q + IL E R++G+D +N+ A A++N V+SSLGP G+DKMLVD +GD+ ITNDG TILK ++VEHPAAK++VE+++ QD VGDGTT+ VI+A LL++A L+ +HPT I GYR+A EA K V ++++ K+ K L+ A+TS++ K D A + EAV++V Sbjct: 2 IAGQPIFILKEGTKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEA-KRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSV 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THS_DESSY (Thermosome subunit OS=Desulfurococcus sp. (strain SY) GN=ths PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.977e-37 Identity = 76/170 (44.71%), Postives = 119/170 (70.00%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R G+D + N++A + VA ++++LGP G+DKMLVD +GD+ ITNDGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELLK+A +L+ IHP+ II GY LA +A + + E +A +V ++L A TS++ K + ++ A + VEAV+ V Sbjct: 17 QRYVGRDAQRLNILAARIVAETIRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLKKAEELLDQNIHPSIIIKGYALAAEKA-QEILEGIAKEVSPDDVETLKKAAVTSITGKAAEEEREYLAEIAVEAVRQV 185
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSB_THEK1 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-1) GN=thsB PE=3 SV=2) HSP 1 Score: 155.221 bits (391), Expect = 2.977e-37 Identity = 75/170 (44.12%), Postives = 120/170 (70.59%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ ITNDGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+ II GY LA +A + ++E +A V+ ++ L A TS++ K + ++ A + VEAV+ V Sbjct: 17 QRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDE-IAKDVDVEDREILKKAAVTSITGKAAEEEREYLAEIAVEAVKQV 185
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSB_PYRKO (Thermosome subunit beta OS=Pyrococcus kodakaraensis GN=thsB PE=3 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.977e-37 Identity = 75/170 (44.12%), Postives = 120/170 (70.59%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ ITNDGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+ II GY LA +A + ++E +A V+ ++ L A TS++ K + ++ A + VEAV+ V Sbjct: 17 QRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKAQEILDE-IAKDVDVEDREILKKAAVTSITGKAAEEEREYLAEIAVEAVKQV 185
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THS1_HALVO (Thermosome subunit 1 OS=Halobacterium volcanii GN=cct1 PE=2 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.977e-37 Identity = 86/181 (47.51%), Postives = 123/181 (67.96%), Query Frame = 1 Query: 142 QTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVK 675 Q + ILGE R +GQD ++ N+ A +AVA V+++LGP G+DKMLVD G V +TNDG TILK ++++HPAA ++VE++E Q+ EVGDGTT+ VI A ELL +A DL+ + +H T+I GYR A +A K V E A++V + +++L A T+M+ K D + LVV+AV AVK Sbjct: 9 QPMIILGEDSQRTSGQDAQSMNITAGKAVAEAVRTTLGPKGMDKMLVDSGGQVVVTNDGVTILKEMDIDHPAANMIVEVSETQEDEVGDGTTTAVINAGELLDQAEDLLDSDVHATTIAQGYRQAAEKA-KEVLEDNAIEVTEDDRETLTKIAATAMTGKGAESAKDLLSELVVDAVLAVK 188
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSA_SULAC (Thermosome subunit alpha OS=Sulfolobus acidocaldarius GN=thsA PE=3 SV=2) HSP 1 Score: 154.836 bits (390), Expect = 3.889e-37 Identity = 82/178 (46.07%), Postives = 119/178 (66.85%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVE------KLGKDSLVNCAKTSMSXKLIGG---DSDFFANLVVEAVQAV 672 R +G+D N++A +A ++KSSLGP GLDKML+D GDVTITNDGATI+K +E++HPAAK+LVE A+ QD EVGDGTTS V++A LL +A +L+ +HPT II GY+ A+ +A + + ++L++K++ K L T+MS K I G + D +LV++A+ V Sbjct: 14 RSSGRDALRNNILAAVTLAEMLKSSLGPRGLDKMLIDSFGDVTITNDGATIVKEMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGLLLDKAEELLEQNVHPTIIIDGYKKALTKALEII-DQLSLKIDVNDLSSPTAKAQLKKIVSTTMSSKFIAGGAEEIDKIIDLVIDAITIV 190
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSB_METTH (Thermosome subunit beta OS=Methanobacterium thermoautotrophicum GN=thsB PE=3 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 6.633e-37 Identity = 81/186 (43.55%), Postives = 127/186 (68.28%), Query Frame = 1 Query: 127 MAISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVK 675 MA Q + +L E R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ +TNDG TILK +++EHPAAK+LVE+A+ Q+ EVGDGTT+ VI+A ELLK+A +L+ +IHPT I GYR A +A + +++ + ++ +D+L+ A T+M+ K + A L+V+AV+ V+ Sbjct: 1 MAQGQQPILVLPEGTSRYLGRDAQRMNILAGKILAETVRTTLGPKGMDKMLVDSLGDIVVTNDGVTILKEMDIEHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKKAENLLEMEIHPTIIAMGYRQAAEKAQEILDD---IAIDASDRDTLMKVAMTAMTGKGTEKAREPLAELIVDAVKQVE 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THS_METJA (Thermosome subunit OS=Methanocaldococcus jannaschii GN=ths PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 8.663e-37 Identity = 76/170 (44.71%), Postives = 121/170 (71.18%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R G+D + N++A + +A V+++LGP G+DKMLVD++GD+ +TNDG TILK + VEHPAAK+L+E+A+ Q++EVGDGTT+ V++A ELL++A +L+ IHP+ II+GY +A +A + + + +A +V+ + L A TS++ K + A +VVEAV+AV Sbjct: 16 KRYVGRDAQRMNILAGRIIAETVRTTLGPKGMDKMLVDELGDIVVTNDGVTILKEMSVEHPAAKMLIEVAKTQEKEVGDGTTTAVVIAGELLRKAEELLDQNIHPSVIINGYEMARNKAVEEL-KSIAKEVKPEDTEMLKKIAMTSITGKGAEKAREQLAEIVVEAVRAV 184
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSB_AERPE (Thermosome subunit beta OS=Aeropyrum pernix GN=thsB PE=3 SV=2) HSP 1 Score: 153.295 bits (386), Expect = 1.131e-36 Identity = 80/170 (47.06%), Postives = 116/170 (68.24%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R G++ N+MA +A+A I+K++ GP G+DKMLVD +GD+TITN+GATIL ++V HPAAK+LV++++ Q+ E GDGT + VI A ELLK A L+ IHPT I+ GY+ A+R+A + + E +A V + L AKTS++ K + D+FA L VEAV+ V Sbjct: 24 QRSYGREALRANIMAVRAIAQILKTTYGPKGMDKMLVDSLGDITITNNGATILDKMDVAHPAAKMLVQISKGQEDEAGDGTKTTVIFAGELLKEAEKLLDINIHPTIIVEGYKEALRKASEVI-ESIAEPVSYDDVEKLKLIAKTSLNSKAVAEARDYFAELAVEAVRTV 192 The following BLAST results are available for this feature:
BLAST of FC921560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921560 ID=FC921560; Name=FC921560; organism=Citrus clementina; type=EST; length=689bpback to top |