FC921560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.131e-36 Identity = 82/180 (45.56%), Postives = 124/180 (68.89%), Query Frame = 1 Query: 142 QTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 Q + I+GE R +D + N+ A +AVA V+S+LGP G+DKMLVD +GDVTITNDG TILK +++++P A+++VE+AE Q+ E GDGTT+ V +A ELLK A DL+ IHPT+II G+ LA +A + +++ +A +V+ ++ L A+TSM+ K + + A+L+V AV+ V Sbjct: 9 QPMIIMGEDAQRVKDRDAQEYNIRAARAVAEAVRSTLGPKGMDKMLVDSMGDVTITNDGVTILKEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLEQDIHPTAIIRGFNLASEKAREEIDD-IAERVDPDDEELLKKVAETSMTGKSSELNKELLADLIVRAVRQV 187
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSB_THEK8 (Thermosome subunit beta OS=Thermococcus sp. (strain KS-8) GN=thsB PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.478e-36 Identity = 73/170 (42.94%), Postives = 119/170 (70.00%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R G+D + N++A + +A V+++LGP G+DKMLVD +GD+ ITNDGATIL ++++HPAAK++VE+A+ QD+E GDGTT+ V++A ELL++A +L+ IHP+ II GY LA +A + + + +A V+ ++ L A T+++ K + ++ A + VEAV+ V Sbjct: 17 QRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVITNDGATILDEMDIQHPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIIIKGYALAAEKA-QEILDSIARDVDVEDREILKKAAMTAITGKAAEEEREYLAEIAVEAVKQV 185
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 152.91 bits (385), Expect = 1.478e-36 Identity = 80/186 (43.01%), Postives = 125/186 (67.20%), Query Frame = 1 Query: 124 EMAISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 + + Q + I+G+ R +D + N+ A +AVA+ V+S+LGP G+DKMLV +GDVT+TNDG TIL+ +++++P A+++VE+AE Q+ E GDGTT+ V +A ELLK A DL+ IHPT+II GY LA +A + V + +AV V+ KD + + A+TSM+ K D + ++++ +AV V Sbjct: 4 QQRMQGQPMIIMGDDAQRVKDRDAQEHNISAARAVADAVRSTLGPKGMDKMLVSSMGDVTVTNDGVTILQEMDIDNPTAEMIVEVAETQEDEAGDGTTTAVAIAGELLKNAEDLLERDIHPTAIIKGYNLAAEQAREEV-DNVAVDVDPDDKDLIRSVAETSMTGKGAELDKELLSSIIYDAVNQV 188
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPH_CHICK (T-complex protein 1 subunit eta OS=Gallus gallus GN=CCT7 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.930e-36 Identity = 80/160 (50.00%), Postives = 110/160 (68.75%), Query Frame = 1 Query: 196 NVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDS----LVNCAKTSMSXKLIGGDSDFFANLVVEAV 663 N+ ACQ +A V+++LGP G+DK++VDD G TI+NDGATILK+L+V HPAAK LV++A+ QD EVGDGTTSV ++AAE LK+ V +HP II +R A + A + + +AV V+K KD L CA T++S KLI +FF+ +VV+AV Sbjct: 25 NINACQVIAEAVRTTLGPRGMDKLIVDDRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKD-IAVSVKKEDKDEQRSLLEKCAATALSSKLISQSKEFFSKMVVDAV 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSB_SULTO (Thermosome subunit beta OS=Sulfolobus tokodaii GN=thsB PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 9.578e-36 Identity = 77/169 (45.56%), Postives = 116/169 (68.64%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 R G++ N+ A +AV +KS+ GP G+DKMLVD +GD+TITNDGATIL ++++HPAAK+LV++A+ QD E DGT + VI+A EL+K+A +L+ +IHPT I+SG++ A +A K + E++A KV D L A TS++ K + G ++ A++V +AV V Sbjct: 25 RTYGKEALRINIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVILAGELVKKAEELLYKEIHPTIIVSGFKKAEEQALKTI-EEIAQKVSVNDMDILKKVAMTSLNSKAVAGAREYLADIVAKAVTQV 192
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 4.753e-35 Identity = 77/174 (44.25%), Postives = 118/174 (67.82%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVE------KLGKDSLVNCAKTSMSXKLI--GGDSDFFANLVVEAV 663 R G+D N++A + +A +++SSLGP GLDKML+D GDVTITNDGATI+K +E++HPAAK+LVE A+ QD EVGDGTTS V++A LL++A L+ IHPT II GY+ A +A + + +L +++ + +D+L A T+++ K I G + + ++V++A+ Sbjct: 14 RTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYNKALELL-PQLGTRIDIKDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAI 186
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.753e-35 Identity = 80/160 (50.00%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 196 NVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGK----DSLVNCAKTSMSXKLIGGDSDFFANLVVEAV 663 N+ ACQ +A V+++LGP G+DK++VD G TI+NDGATILK+L+V HPAAK LV++A+ QD EVGDGTTSV ++AAE LK+ V +HP II +R A + A + E +AV V+K K L CA T++S KLI FFA +VV+AV Sbjct: 25 NISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKE-IAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAV 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 4.753e-35 Identity = 80/160 (50.00%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 196 NVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGK----DSLVNCAKTSMSXKLIGGDSDFFANLVVEAV 663 N+ ACQ +A V+++LGP G+DK++VD G TI+NDGATILK+L+V HPAAK LV++A+ QD EVGDGTTSV ++AAE LK+ V +HP II +R A + A + E +AV V+K K L CA T++S KLI FFA +VV+AV Sbjct: 25 NISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKE-IAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAV 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSA_SULSH (Thermosome subunit alpha OS=Sulfolobus shibatae GN=thsA PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.208e-35 Identity = 77/174 (44.25%), Postives = 118/174 (67.82%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVE------KLGKDSLVNCAKTSMSXKLI--GGDSDFFANLVVEAV 663 R G+D N++A + +A +++SSLGP GLDKML+D GDVTITNDGATI+K +E++HPAAK+LVE A+ QD EVGDGTTS V++A LL++A L+ IHPT II GY+ A +A + + +L +++ + +D+L A T+++ K I G + + ++V++A+ Sbjct: 14 RTTGRDALRNNILAAKTLAEMLRSSLGPKGLDKMLIDSFGDVTITNDGATIVKDMEIQHPAAKLLVEAAKAQDAEVGDGTTSAVVLAGALLEKAESLLDQNIHPTIIIEGYKKAYTKALELL-PQLGTRIDIRDLNSSVARDTLRKIAFTTLASKFIAEGAELNKIIDMVIDAI 186
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 6.208e-35 Identity = 80/160 (50.00%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 196 NVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGK----DSLVNCAKTSMSXKLIGGDSDFFANLVVEAV 663 N+ ACQ +A V+++LGP G+DK++VD G TI+NDGATILK+L+V HPAAK LV++A+ QD EVGDGTTSV ++AAE LK+ V +HP II +R A + A + E +AV V+K K L CA T++S KLI FFA +VV+AV Sbjct: 25 NISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKE-IAVTVKKQDKVEQRKMLEKCAMTALSSKLISQQKVFFAKMVVDAV 183 The following BLAST results are available for this feature:
BLAST of FC921560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921560 ID=FC921560; Name=FC921560; organism=Citrus clementina; type=EST; length=689bpback to top |