FC921560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPH_SCHPO (Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces pombe GN=cct7 PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.108e-35 Identity = 78/166 (46.99%), Postives = 109/166 (65.66%), Query Frame = 1 Query: 175 GQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNE---KLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAV 663 G+ N+ AC AV + ++++LGP+G DK++VDD G+V I+NDGATI+K+L++ HPAAK LV++A QD EVGDGTTSVV+ A ELL+ A V + + II GYR A + A + E L + E +D L CA T+M+ KLI +S FF +VV+AV Sbjct: 22 GRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDGATIMKLLDIVHPAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAVNKIKEIAIHLDLSDEGKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAV 187
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPH_BOVIN (T-complex protein 1 subunit eta OS=Bos taurus GN=CCT7 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.108e-35 Identity = 80/160 (50.00%), Postives = 107/160 (66.88%), Query Frame = 1 Query: 196 NVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGK----DSLVNCAKTSMSXKLIGGDSDFFANLVVEAV 663 N+ ACQ +A V+++LGP G+DK++VD G TI+NDGATILK+L+V HPAAK LV++A+ QD EVGDGTTSV ++AAE LK+ V +HP II +R A + A + E +AV V+K K L CA T++S KLI FFA +VV+AV Sbjct: 25 NISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKE-IAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAV 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSA_METTH (Thermosome subunit alpha OS=Methanobacterium thermoautotrophicum GN=thsA PE=3 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.383e-34 Identity = 81/186 (43.55%), Postives = 121/186 (65.05%), Query Frame = 1 Query: 127 MAISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVK 675 MA Q + IL + R G++ + N++A + +A V+++LGP G+DKMLVD +GD+ ITNDG TIL+ +++ HPAAK+LVE+A+ Q+ EVGDGTT+ VI+A ELLK A L+ +HPT I GYR A +A + + E + +E +D+L+ A T+M+ K + A LVV+AV V+ Sbjct: 1 MAQGQQPIFILPQDTSRYVGREAQRINILAGKVLAETVRTTLGPKGMDKMLVDSLGDIVITNDGVTILREMDISHPAAKMLVEVAKTQEDEVGDGTTTAVIIAGELLKEAEKLIEMGVHPTIIALGYRNAALKAQEILEE---ISMEASDRDTLMKVAITAMTGKGSERAKEKLAELVVDAVMQVE 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSA_HALSA (Thermosome subunit alpha OS=Halobacterium salinarium GN=thsA PE=3 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.383e-34 Identity = 81/187 (43.32%), Postives = 120/187 (64.17%), Query Frame = 1 Query: 133 ISSQTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTN 684 + +Q L +L E R +G+D ++ N+ A +AVA V+++LGP G+DKMLVD G+V +TNDG TILK +++EHPAA ++VE+AE Q+ EVGDGTT+ V+V+ ELL A L+ IH T++ GYR A +A K + + A+ V ++L A T+M+ K ++LVV AVQ+V N Sbjct: 5 MGNQPLIVLSEDSQRTSGEDAQSMNITAGKAVAESVRTTLGPKGMDKMLVDSSGEVVVTNDGVTILKEMDIEHPAANMIVEVAETQETEVGDGTTTSVVVSGELLSEAETLLEQDIHATTLAQGYRQAAEKA-KELLDDAAIDVSADDTETLEKIAATAMTGKGAENAKGVLSDLVVRAVQSVADDN 190
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSB_SULSO (Thermosome subunit beta OS=Sulfolobus solfataricus GN=thsB PE=3 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 2.359e-34 Identity = 77/169 (45.56%), Postives = 110/169 (65.09%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 R G++ N+ A +A+ +KS+ GP G+DKMLVD +GD+TITNDGATIL ++++HP K+LV++A+ QD E DGT + VI+A EL K+A DL+ +IHPT I+SGY+ A A K + E +A V D L A TS+ K + G ++ A+LVV+AV V Sbjct: 24 RTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQE-IAQPVTINDTDVLRKVALTSLGSKAVAGAREYLADLVVKAVAQV 191
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.081e-34 Identity = 75/169 (44.38%), Postives = 114/169 (67.46%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 R G++ N+ A +AV +K++ GP G+DKMLVD +GD+TITNDGATIL ++++HPAAK+LV++A+ QD E DGT + VI + EL+K+A +L+ +IHPT I+SGY+ A A K + E+++ KV + L A TS+S K + G + A++VV+A+ V Sbjct: 25 RTYGKEALRINIAAVKAVEEALKTTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEELLYKEIHPTIIVSGYKKAEEMAIKTI-EEISTKVSVNDTEILRKVALTSLSSKAVAGAREHLADIVVKAITQV 192
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPH_PLAF7 (T-complex protein 1 subunit eta OS=Plasmodium falciparum (isolate 3D7) GN=PFC0350c PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.081e-34 Identity = 76/166 (45.78%), Postives = 110/166 (66.27%), Query Frame = 1 Query: 175 GQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNE---KLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAV 663 G+ +N+ ACQ + +IVK++LGP G+DK++ + DVTITNDGAT++ +L + HPAA +LV++A+ QD EVGDGTTSVV+VA ELL A L+ + I P II G+R A A +NE + K E+ + L+ CA+T+++ KL+ +FF LVV AV Sbjct: 21 GRSQIIRNINACQIIVDIVKTTLGPRGMDKLIYTE-RDVTITNDGATVMNLLNISHPAASILVDIAKSQDDEVGDGTTSVVVVAGELLNEAKGLLNDGIEPNMIIDGFRNACNVAINKLNELSLNFSNKNEEEKRSILLKCAQTALNSKLVSNHKEFFGELVVNAV 185
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPE_YEAST (T-complex protein 1 subunit epsilon OS=Saccharomyces cerevisiae GN=CCT5 PE=1 SV=3) HSP 1 Score: 144.436 bits (363), Expect = 5.256e-34 Identity = 73/170 (42.94%), Postives = 118/170 (69.41%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNE---KLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAV 663 +RQ G + + +++A ++VA+I+K+SLGP GLDK+L+ G++TITNDGATIL +E+++ AK+LV+L++ QD E+GDGTT VV++A+ LL +A +L++ IHP I +G+ A + A + E ++ ++L +D L+ AKTS+ K++ D D FA + VEAV Sbjct: 39 KRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAV 208
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THSB_SULSH (Thermosome subunit beta OS=Sulfolobus shibatae GN=thsB PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.171e-33 Identity = 75/169 (44.38%), Postives = 109/169 (64.50%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 R G++ N+ A +A+ +KS+ GP G+DKM VD +GD+TITNDGATIL ++++HP K+LV++A+ QD E DGT + VI+A EL K+A DL+ +IHPT I+SGY+ A A K + + +A V D L A TS+ K + G ++ A+LVV+AV V Sbjct: 24 RTYGKEALRANIAAVKAIEEALKSTYGPRGMDKMFVDSLGDITITNDGATILDKMDLQHPTGKLLVQIAKGQDEETADGTKTAVILAGELAKKAEDLLYKEIHPTIIVSGYKKAEEIALKTIQD-IAQPVSINDTDVLRKVALTSLGSKAVAGAREYLADLVVKAVAQV 191
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.529e-33 Identity = 77/169 (45.56%), Postives = 109/169 (64.50%), Query Frame = 1 Query: 181 DVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTNH 687 D+R N+ A +AV++ +++SLGP G+DKM+ G+VTITNDGATILK + V HPAAK+LVEL+ QD E GDGTTSVV+VA LLK L++ IHPT+I ++ +A + E ++ +E ++SLV A TS++ K++ S A + VEAV V H Sbjct: 25 DIRQSNINAAKAVSDAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMNVIHPAAKMLVELSRAQDVEAGDGTTSVVVVAGALLKAVEKLLQMGIHPTAISDAFQKCSAKAVDILTE-MSTPIELTDRESLVKSASTSLNSKVVSQHSSQLAPIAVEAVLKVTEAGH 192 The following BLAST results are available for this feature:
BLAST of FC921560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921560 ID=FC921560; Name=FC921560; organism=Citrus clementina; type=EST; length=689bpback to top |