FC921560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 2.608e-33 Identity = 77/182 (42.31%), Postives = 119/182 (65.38%), Query Frame = 1 Query: 142 QTLDILGERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLV----DDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVK 675 Q L + + G+ R + + A+ ++VKS+LGP G+DK+L+ + G + +TNDGATILK + V++PAAKVLV+++ QD EVGDGTTSV ++AAELLK A LV +IHP +IISGYR A+ A + + +K +++ +D L+ A+T++ K++ + FA L V+AV +K Sbjct: 5 QILKDNAQEERGESARLSSFVGAIAIGDLVKSTLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESL-KKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVLRLK 185
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPG_DROME (T-complex protein 1 subunit gamma OS=Drosophila melanogaster GN=Cctgamma PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 4.449e-33 Identity = 64/175 (36.57%), Postives = 116/175 (66.29%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTNH 687 +R++G+ V+ +N+ A +A+A+++++ LGP + KML+D +G + +TNDG IL+ + V+HPAAK ++E+A QD EVGDGTTSV+++A E+L A ++ +IHPT II YR A+ + ++ +L+++++ K + + K + K IG SD + ++AV+ V ++ + Sbjct: 16 KRESGRKVQLENIQAGKAIADVIRTCLGPQAMLKMLMDPMGGIVMTNDGNAILREITVQHPAAKSMIEIARTQDEEVGDGTTSVIVLAGEMLAAAEPFLQQQIHPTVIIRAYREALEDIVGHLQSQLSIQLDVKDKAKMADVVKACVGTKFIGKWSDLAVKIALDAVETVTLSEN 190
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.811e-33 Identity = 76/170 (44.71%), Postives = 113/170 (66.47%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R +R N+ A +AVA+ V++SLGP G+DKM+ D+ GDVTITNDGATILK ++V HP+AK+LVEL++ QD E GDGTTSVV++A LL N L++ IHPT I ++ A+ + + V ++ V+ +++L+N A TS+ K++ S A + V+AV V Sbjct: 23 DRDKPAQIRYSNISAAKAVADAVRTSLGPKGMDKMIQDEKGDVTITNDGATILKQMQVLHPSAKMLVELSKAQDIEAGDGTTSVVVIAGALLDSCNRLLQRGIHPTIISESFQKAVDKGVE-VLTAMSQPVQLGDRETLLNSATTSLCSKVVSQYSSLLAPMSVDAVMRV 191
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 140.969 bits (354), Expect = 5.811e-33 Identity = 74/170 (43.53%), Postives = 112/170 (65.88%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R +R N+ A +AVA+ +++SLGP G+DKM+ D GDVTITNDGATILK ++V HPAA++LVEL++ QD E GDGTTSVVI+A LL L++ IHPT I ++ A+ + + + + ++ VE +++L+N A TS++ K++ S + + V AV V Sbjct: 26 DRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTD-MSRPVELSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKV 194
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPE_SCHPO (T-complex protein 1 subunit epsilon OS=Schizosaccharomyces pombe GN=cct5 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.589e-33 Identity = 76/170 (44.71%), Postives = 109/170 (64.12%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNE-KLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 R G D +++A + VANIV++SLGP GLDK+L+ G++T+TNDGATIL +EVEH AK+LV+L++ QD E+GDGTT VV++A LL++A L+ IHP I GY A + A K+++ V +L AKTS+ K++ D FAN+ V+AV +V Sbjct: 29 RLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQMEVEHQIAKLLVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDAISDVVDFSPENTTNLFRSAKTSLGSKVVSKAHDHFANIAVDAVLSV 198
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPH_DICDI (T-complex protein 1 subunit eta OS=Dictyostelium discoideum GN=cct7 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.912e-33 Identity = 73/158 (46.20%), Postives = 106/158 (67.09%), Query Frame = 1 Query: 196 NVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNE-KLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQ 666 N+ AC A+ + V+++LGP G+DK++ VTI+NDGAT++K+L++ HPAA+ LV++A+ QD EVGDGTTSVVI+A E LK A + IHP II +R A A + + E + +K E + ++ L CA TSM+ KLI FF+ +VV+AVQ Sbjct: 28 NINACCAIVDTVRTTLGPRGMDKLIYQSERQVTISNDGATVMKLLDIVHPAARTLVDIAKSQDSEVGDGTTSVVILAGEFLKAAKPFLEEGIHPQIIIRAFRSACELAKQKIQELSVDIKPENM-REFLEKCASTSMNSKLIASHKQFFSKMVVDAVQ 184
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPE_MOUSE (T-complex protein 1 subunit epsilon OS=Mus musculus GN=Cct5 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.912e-33 Identity = 77/172 (44.77%), Postives = 110/172 (63.95%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKY---VNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 R G + ++MA +AVAN +++SLGP GLDKM+VD GDVTITNDGATIL M++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A L+ IHP I GY A R A ++ +++K+ V + + L+ AKT++ K+I A + V AV V Sbjct: 27 RLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTITNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHLDKISDKVLVDIN--NPEPLIQTAKTTLGSKVINSCHRQMAEIAVNAVLTV 196
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPE_PONAB (T-complex protein 1 subunit epsilon OS=Pongo abelii GN=CCT5 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.295e-32 Identity = 75/170 (44.12%), Postives = 110/170 (64.71%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNE-KLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 R G + ++MA +AVAN +++SLGP GLDKM+VD GDVT+TNDGATIL M++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A L+ IHP I GY A R A +++++ +V V+ + L+ AKT++ K++ A + V AV V Sbjct: 27 RLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTV 196
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPE_MACFA (T-complex protein 1 subunit epsilon OS=Macaca fascicularis GN=CCT5 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.295e-32 Identity = 75/170 (44.12%), Postives = 110/170 (64.71%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNE-KLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 R G + ++MA +AVAN +++SLGP GLDKM+VD GDVT+TNDGATIL M++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A L+ IHP I GY A R A +++++ +V V+ + L+ AKT++ K++ A + V AV V Sbjct: 27 RLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTV 196
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPE_HUMAN (T-complex protein 1 subunit epsilon OS=Homo sapiens GN=CCT5 PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.295e-32 Identity = 75/170 (44.12%), Postives = 110/170 (64.71%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNE-KLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 R G + ++MA +AVAN +++SLGP GLDKM+VD GDVT+TNDGATIL M++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A L+ IHP I GY A R A +++++ +V V+ + L+ AKT++ K++ A + V AV V Sbjct: 27 RLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTV 196 The following BLAST results are available for this feature:
BLAST of FC921560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921560 ID=FC921560; Name=FC921560; organism=Citrus clementina; type=EST; length=689bpback to top |