FC921560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 1.295e-32 Identity = 73/170 (42.94%), Postives = 112/170 (65.88%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R +R N+ A +AVA+ +++SLGP G+DKM+ D GDVTITNDGATILK ++V HPAA++LVEL++ QD E GDGTTSVVI+A LL L++ IHPT I ++ A+ + + + + ++ V+ +++L+N A TS++ K++ S + + V AV V Sbjct: 26 DRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTD-MSRPVQLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKV 194
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 139.813 bits (351), Expect = 1.295e-32 Identity = 73/170 (42.94%), Postives = 112/170 (65.88%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R +R N+ A +AVA+ +++SLGP G+DKM+ D GDVTITNDGATILK ++V HPAA++LVEL++ QD E GDGTTSVVI+A LL L++ IHPT I ++ A+ + + + + ++ V+ +++L+N A TS++ K++ S + + V AV V Sbjct: 26 DRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTD-MSRPVQLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKV 194
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPE_CAEEL (T-complex protein 1 subunit epsilon OS=Caenorhabditis elegans GN=cct-5 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.691e-32 Identity = 73/170 (42.94%), Postives = 113/170 (66.47%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R G + +++A +AVAN +++SLGP GLDKMLV GDVTITNDGATI++ ++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A L+ IHP I G+ LA ++A + + + ++ K ++ LV A+TS+ K++ FA + V+AV +V Sbjct: 27 KRITGVEAVKSHILAARAVANTLRTSLGPRGLDKMLVSPDGDVTITNDGATIMEKMDVQHHVAKLMVELSKSQDHEIGDGTTGVVVLAGALLEEAEKLIDRGIHPIKIADGFDLACKKALETL-DSISDKFPVENRERLVETAQTSLGSKIVNRSLRQFAEIAVDAVLSV 195
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 1.691e-32 Identity = 74/170 (43.53%), Postives = 111/170 (65.29%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R +R N+ A +AVA+ +++SLGP G+DKM+ D GDVTITNDGATILK ++V HPAA++LVEL++ QD E GDGTTSVVI+A LL L++ IHPT I ++ A+ + + + + ++ VE +++L+N A TS++ K+ S + + V AV V Sbjct: 26 DRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTD-MSRPVELSDRETLLNSATTSLNSKVASQYSSLLSPMSVNAVMKV 194
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 1.691e-32 Identity = 73/170 (42.94%), Postives = 112/170 (65.88%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 +R +R N+ A +AVA+ +++SLGP G+DKM+ D GDVTITNDGATILK ++V HPAA++LVEL++ QD E GDGTTSVVI+A LL L++ IHPT I ++ A+ + + + + ++ E +++L+N A TS++ K++ S + + V+AV V Sbjct: 29 DRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTD-MSRPEELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKV 197
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPG_BOVIN (T-complex protein 1 subunit gamma OS=Bos taurus GN=CCT3 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.884e-32 Identity = 64/171 (37.43%), Postives = 118/171 (69.01%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVK 675 +R++G+ V++ N+ A + +A+I+++ LGP + KML+D +G + +TNDG IL+ ++V+HPAAK ++E++ QD EVGDGTTSV+I+A E+L A + ++HPT +IS YR A+ + + +K+++ V+ +D+++N +S++ K+I S N+ ++AV+ V+ Sbjct: 15 KRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTL-KKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQ 184
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPE_RAT (T-complex protein 1 subunit epsilon OS=Rattus norvegicus GN=Cct5 PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.884e-32 Identity = 76/171 (44.44%), Postives = 111/171 (64.91%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLA--VKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 R G + ++MA +AVAN +++SLGP GLDKM+VD GDVT+TNDGATIL M++V+H AK++VEL++ QD E+GDGTT VV++A LL+ A L+ IHP I GY A R A +++ +K++ V V+ + L+ AKT++ K++ A + V AV V Sbjct: 27 RLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIQHL-DKISDNVLVDINNPEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTV 196
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: THS3_HALVO (Thermosome subunit 3 OS=Halobacterium volcanii GN=cct3 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.766e-32 Identity = 82/181 (45.30%), Postives = 116/181 (64.09%), Query Frame = 1 Query: 142 QTLDILGE---RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGG-DSDFFANLVVEAVQAV 672 Q L IL E R G+ + N+ A +AVA V+++LGP G+DKMLVD G+V ITNDGATIL+ +++EHPAA++LVE+++ Q+ EVGDGTT+ ++ ELL A DL+ + +HPT I+ GY A R A +++ V L D L A++SM+ K G +D A VV+AVQ V Sbjct: 7 QPLYILAEGTNRTHGRSAQDSNIRAGKAVAEAVRTTLGPRGMDKMLVDSSGEVVITNDGATILEKMDIEHPAAQMLVEVSQTQEEEVGDGTTTAAVLTGELLAHAEDLLDDDLHPTVIVEGYTEAARIAQDAIDD--MVLDVTLDDDLLRKVAESSMTGKGTGDVTADVLAKHVVKAVQMV 185
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPH_YEAST (T-complex protein 1 subunit eta OS=Saccharomyces cerevisiae GN=CCT7 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32 Identity = 76/159 (47.80%), Postives = 105/159 (66.04%), Query Frame = 1 Query: 196 NVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKV---EKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAV 663 N+ AC AV +K +LGP+G D ++V TI+NDGATILK+L+V HPAAK LV+++ QD EVGDGTTSV I+A EL+K A + I I+ GYR A+ A + +NE LAV + + G++ L CA+T+MS KLI ++DFF + V+AV Sbjct: 29 NINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINE-LAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAV 186
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.919e-32 Identity = 70/176 (39.77%), Postives = 109/176 (61.93%), Query Frame = 1 Query: 160 GERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVKMTNH 687 G RQ G + N+ A +AVA+++++ LGP + KML+D +G V +TNDG IL+ +EV HPAAK ++ELA QD EVGDGTTSV+I+A E+L A+ L+ KIHP +I ++ A+ +A ++E + + V + +T + KL+ SD +L + AV+ V T++ Sbjct: 12 GNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTNDGHAILREIEVAHPAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDALSIIDE-ITLPVNVDDNAEMFRLIRTCIGTKLVARWSDLMCHLALRAVRTVASTSN 186 The following BLAST results are available for this feature:
BLAST of FC921560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC921560 ID=FC921560; Name=FC921560; organism=Citrus clementina; type=EST; length=689bpback to top |