FC921560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPB_MACFA (T-complex protein 1 subunit beta OS=Macaca fascicularis GN=CCT2 PE=2 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 3.188e-31 Identity = 78/179 (43.58%), Postives = 111/179 (62.01%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVT--ITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKD------SLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVK 675 + + + R + + A+ ++VKS+LGP G+DK+L+ D + +TNDGATILK + V++PAAKVLV+++ +QD EVGDGTTSV ++AAELL+ A L+ KIHP +II+G+ REA K E L G D L+N A T++S KL+ D F L VEAV +K Sbjct: 17 DEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGW----REATKAAREALLSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLK 191
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPB_HUMAN (T-complex protein 1 subunit beta OS=Homo sapiens GN=CCT2 PE=1 SV=4) HSP 1 Score: 135.191 bits (339), Expect = 3.188e-31 Identity = 78/179 (43.58%), Postives = 111/179 (62.01%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVT--ITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKD------SLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVK 675 + + + R + + A+ ++VKS+LGP G+DK+L+ D + +TNDGATILK + V++PAAKVLV+++ +QD EVGDGTTSV ++AAELL+ A L+ KIHP +II+G+ REA K E L G D L+N A T++S KL+ D F L VEAV +K Sbjct: 17 DEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGW----REATKAAREALLSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLK 191
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPG_PONAB (T-complex protein 1 subunit gamma OS=Pongo abelii GN=CCT3 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.164e-31 Identity = 65/171 (38.01%), Postives = 115/171 (67.25%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVK 675 +R++G+ V++ N+ A + +A+I+++ LGP + KML+D +G + +TNDG IL+ ++V+HPAAK +VE++ QD EVGDGTTSV+I+A E+L A + ++HPT +IS YR A+ + + +K+++ V+ D ++N +S++ K I S N+ ++AV+ V+ Sbjct: 15 KRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMVEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTL-KKISIPVDINDSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQ 184
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPG_HUMAN (T-complex protein 1 subunit gamma OS=Homo sapiens GN=CCT3 PE=1 SV=4) HSP 1 Score: 134.806 bits (338), Expect = 4.164e-31 Identity = 64/171 (37.43%), Postives = 115/171 (67.25%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVK 675 +R++G+ V++ N+ A + +A+I+++ LGP + KML+D +G + +TNDG IL+ ++V+HPAAK ++E++ QD EVGDGTTSV+I+A E+L A + ++HPT +IS YR A+ + + +K+++ V+ D ++N +S++ K I S N+ ++AV+ V+ Sbjct: 15 KRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTL-KKISIPVDISDSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQ 184
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPD_KLULA (T-complex protein 1 subunit delta OS=Kluyveromyces lactis GN=CCT4 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.164e-31 Identity = 71/169 (42.01%), Postives = 107/169 (63.31%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 R+ Q+VR N++A +AVA+ +++SLGP G+DKM+ GD+ I+NDG TILK + + HP AK+LVE++ QD E GDGTTSVVI+ LL A L+ IHPT I ++ A + + + ++ K+ K++LV A TS+S K++ S F A L V+ V ++ Sbjct: 16 REKPQEVRKANIIAARAVADAIRTSLGPKGMDKMIKTSRGDIIISNDGHTILKQMAILHPVAKMLVEVSGAQDVEAGDGTTSVVIMTGALLGAAEKLLNKGIHPTIIAESFQRAAERSVE-ILLNMSTKISLDDKEALVRAASTSLSSKIVSQHSSFLAPLAVDCVLSI 183
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPB_DICDI (T-complex protein 1 subunit beta OS=Dictyostelium discoideum GN=cct2 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.439e-31 Identity = 72/170 (42.35%), Postives = 116/170 (68.24%), Query Frame = 1 Query: 169 QAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVD--DIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAM---REACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAV 663 + G+ R + + A+ ++VK++LGP G+DK+L+ + ++ ITNDGATIL + +++PAAK+LV+++ QD EVGDGTTSV ++A ELL+ LV+ K+HP +IISG+RLA+ R A + + + K +D L+N A+T++S K++ + D FAN+VV+AV Sbjct: 18 ERGEIARLSSFVGAIAITDLVKTTLGPKGMDKILISASNPNELIITNDGATILTKIYIDNPAAKILVDISRTQDDEVGDGTTSVCVLAGELLREGERLVQQKVHPQTIISGWRLALETARAALQSSTQDHSSDKVKFRED-LLNIARTTLSSKILHTEKDHFANMVVDAV 186
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPG_MOUSE (T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.103e-31 Identity = 62/171 (36.26%), Postives = 117/171 (68.42%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKDSLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVK 675 +R++G+ V++ N+ A + +A+I+++ LGP + KML+D +G + +TNDG IL+ ++V+HPAAK ++E++ QD EVGDGTTSV+I+A E+L A + ++HPT +IS YR+A+ + + +K++ V+ ++ +++ +S++ K+I S N+ ++AV+ V+ Sbjct: 15 KRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRMALDDMISTL-KKISTPVDVNNREMMLSIINSSITTKVISRWSSLACNIALDAVKTVQ 184
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPB_BOVIN (T-complex protein 1 subunit beta OS=Bos taurus GN=CCT2 PE=2 SV=3) HSP 1 Score: 134.035 bits (336), Expect = 7.103e-31 Identity = 77/179 (43.02%), Postives = 111/179 (62.01%), Query Frame = 1 Query: 163 ERQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVT--ITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKD------SLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAVK 675 + + + R + + A+ ++VKS+LGP G+DK+L+ D + +TNDGATILK + V++PAAKVLV+++ +QD EVGDGTTSV ++AAELL+ A L+ KIHP +II+G+ REA K + L G D L+N A T++S KL+ D F L VEAV +K Sbjct: 17 DEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGW----REATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLK 191
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPE1_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 9.277e-31 Identity = 74/171 (43.27%), Postives = 108/171 (63.16%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKD--SLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 R G D N+ A +A+A I+++SLGP G+DKML GDVTITNDGATIL++++V++ AK+LVEL+ QD ++GDGTT VV++A LL++A L+ IHP + GY +A R A ++ E ++ K E D LV T++S K++ A + V+AV AV Sbjct: 23 RLQGLDAHKANIAAAKAIARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVDNQIAKLLVELSRSQDYDIGDGTTGVVVMAGALLEQAEKLLERGIHPIRVAEGYEMASRIAVDHL-ESISTKYEFSATDIEPLVQTCMTTLSSKIVSRCKRALAEISVKAVLAV 192
BLAST of FC921560 vs. ExPASy Swiss-Prot
Match: TCPE2_AVESA (T-complex protein 1 subunit epsilon OS=Avena sativa PE=2 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.067e-30 Identity = 73/171 (42.69%), Postives = 109/171 (63.74%), Query Frame = 1 Query: 166 RQAGQDVRTQNVMACQAVANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKMLEVEHPAAKVLVELAELQDREVGDGTTSVVIVAAELLKRANDLVRNKIHPTSIISGYRLAMREACKYVNEKLAVKVEKLGKD--SLVNCAKTSMSXKLIGGDSDFFANLVVEAVQAV 672 R G D + N+ A ++VA I+++SLGP G+DKML GDVTITNDGATIL++++V++ AK++VEL+ QD ++GDGTT VV++A LL++A L+ IHP + GY +A R A ++ E ++ K E D LV T++S K++ A + V+AV AV Sbjct: 23 RLQGLDAQKANIAAGKSVARILRTSLGPKGMDKMLQSPDGDVTITNDGATILELMDVDNQIAKLMVELSRSQDYDIGDGTTGVVVMAGSLLEQAEKLLERGIHPIRVAEGYEMASRIAVDHL-ESISTKYEFSATDIEPLVQTCMTTLSSKIVSRCKRALAEIAVKAVLAV 192 The following BLAST results are available for this feature:
BLAST of FC921560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 195
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921560 ID=FC921560; Name=FC921560; organism=Citrus clementina; type=EST; length=689bpback to top |