FC921574
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921574 vs. ExPASy Swiss-Prot
Match: RL37A_METST (50S ribosomal protein L37Ae OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.028e-12 Identity = 30/83 (36.14%), Postives = 44/83 (53.01%), Query Frame = 2 Query: 92 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRL 340 + K G G++G RYG ++ +K +E H+K+ C C + VKR GIW C+ CG V GGAY T + I+R+ Sbjct: 3 KKSKVGSTGRFGARYGRKAKRTVKDIEDKMHAKHVCPKCDRPGVKRTHAGIWKCRKCGAVFTGGAYIPTTPMGKVAKRNIKRI 85
BLAST of FC921574 vs. ExPASy Swiss-Prot
Match: RL37A_THEVO (50S ribosomal protein L37Ae OS=Thermoplasma volcanium GN=rpl37ae PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.120e-11 Identity = 32/69 (46.38%), Postives = 43/69 (62.32%), Query Frame = 2 Query: 83 MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAY 289 M+KRT K G G++G RYG ++RK+ ++ + + Y C C K VKR A GIW C+ CG AGGAY Sbjct: 1 MSKRTLKVGAAGRFGPRYGVTIRKEWNEIYKQKIALYTCPSCKKKRVKRLAAGIWVCRHCGYKFAGGAY 69
BLAST of FC921574 vs. ExPASy Swiss-Prot
Match: RL37A_AERPE (50S ribosomal protein L37Ae OS=Aeropyrum pernix GN=rpl37ae PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.120e-11 Identity = 30/68 (44.12%), Postives = 43/68 (63.24%), Query Frame = 2 Query: 92 RTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKY-AVKRKAVGIWGCKDCGKVKAGGAYT 292 RTK G G+YG RYG S+RK+++ + ++ + C FCG V+R +VG+W C+ CG AG AYT Sbjct: 3 RTKVVGPAGRYGPRYGVSVRKRVRDILARRYQPHECPFCGSTGTVRRVSVGVWSCRKCGNTWAGAAYT 70
BLAST of FC921574 vs. ExPASy Swiss-Prot
Match: RL37A_NANEQ (50S ribosomal protein L37Ae OS=Nanoarchaeum equitans GN=rpl37ae PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.463e-11 Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 2 Query: 95 TKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAY 289 TKK G G++G RYG +RK++ +E+ Q K+ C FC AV R+A GI+ CK CGK G AY Sbjct: 6 TKKVGPTGRFGPRYGLGIRKRVLTVEIKQRKKHVCPFCRSKAVIREAYGIYRCKKCGKQFTGLAY 70
BLAST of FC921574 vs. ExPASy Swiss-Prot
Match: RL37A_HALSA (50S ribosomal protein L37Ae OS=Halobacterium salinarium GN=rpl37ae PE=3 SV=2) HSP 1 Score: 66.6254 bits (161), Expect = 9.482e-11 Identity = 32/82 (39.02%), Postives = 44/82 (53.66%), Query Frame = 2 Query: 107 GIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQT 352 G G++G RYG R+++ +E + + + C CG AV R+ GIW C CG AGGAY T S TV +IR +T Sbjct: 8 GSAGRFGARYGRVSRRRVSDIEGTMNEDHACPDCGSEAVSREGTGIWQCGKCGYKYAGGAYQPQTPSGKTVTRSIRTALGET 89
BLAST of FC921574 vs. ExPASy Swiss-Prot
Match: RL37A_HALS3 (50S ribosomal protein L37Ae OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl37Ae PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 9.482e-11 Identity = 32/82 (39.02%), Postives = 44/82 (53.66%), Query Frame = 2 Query: 107 GIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQT 352 G G++G RYG R+++ +E + + + C CG AV R+ GIW C CG AGGAY T S TV +IR +T Sbjct: 8 GSAGRFGARYGRVSRRRVSDIEGTMNEDHACPDCGSEAVSREGTGIWQCGKCGYKYAGGAYQPQTPSGKTVTRSIRTALGET 89 The following BLAST results are available for this feature:
BLAST of FC921574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921574 ID=FC921574; Name=FC921574; organism=Citrus clementina; type=EST; length=566bpback to top |