FC921587

Overview
NameFC921587
Unique NameFC921587
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length592
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14344 contig Ccv1_Contig14344:1..593. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.099e-12
Identity = 54/177 (30.51%), Postives = 81/177 (45.76%), Query Frame = 3
Query:   60 GDVDPAFIQPPEFRPKVQNNMEIDDEIPVIDLSTDPKQ--LVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVKR----DEVHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYA---REVEKLAYSYWNL 563
            G +   FI+P + +P          EIP IDL  DP Q  LV  +  A ++WG FQV NHG PS+L  +++   KEFF  P EEK+   R     +V   G   Q+  +  + W +     +  P+ +                 WP+ P  +R + E+YA   REV    ++Y +L
Sbjct:   17 GTIPAEFIRPEKEQPASTTYHGPAPEIPTIDLD-DPVQDRLVRSIAEASREWGIFQVTNHGIPSDLICKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSIN-------------YRFWPKNPPSYRAVNEEYAKYMREVVDKLFTYLSL 179          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: G3OX1_ARATH (Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA4 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.436e-12
Identity = 46/140 (32.86%), Postives = 66/140 (47.14%), Query Frame = 3
Query:  132 DEIPVIDLSTDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVKRDEVHPMGYHDQEHTK--NVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKLA 545
            + IP+IDL  D      ++GHAC+ WG FQ+ NHG P  L   IE      FG P++ K K  R E    GY         N + W E F         +  SP  D ++L      WP++ L + ++ E+Y   ++KLA
Sbjct:   55 ENIPLIDL--DHPDATNQIGHACRTWGAFQISNHGVPLGLLQDIEFLTGSLFGLPVQRKLKSARSETGVSGYGVARIASFFNKQMWSEGFT--------ITGSPLNDFRKL------WPQHHLNYCDIVEEYEEHMKKLA 178          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.178e-12
Identity = 45/164 (27.44%), Postives = 81/164 (49.39%), Query Frame = 3
Query:   78 FIQPPEFRPKVQNNMEIDDEIPVIDLSTDPK------QLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKLA 545
            F++  + RPKV  N +  +EIP+I L+   +      ++  ++  AC+ WG FQ+++HG  +EL + +   A+EFF  P EEK +         G+    H +   V+DW+E+  ++                   R  ++WP+ P  +RE+ + Y+ E+  LA
Sbjct:   20 FVRDEDERPKVAYN-DFSNEIPIISLAGIDEVEGRRGEICKKIVAACEDWGIFQIVDHGVDAELISEMTGLAREFFALPSEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIR-------------HRDYSRWPDKPEAWREVTKKYSDELMGLA 169          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 5.457e-12
Identity = 48/141 (34.04%), Postives = 65/141 (46.10%), Query Frame = 3
Query:  129 DDEIPVIDLSTDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVKRDEVHPMGYHDQEHTK--NVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKLA 545
            D+ +P+IDLS     +   VGHAC  WG FQ+ NHG PS L   IE      F  P++ K K  R E    GY         N + W E F         +  SP  D ++L      WP + L + E+ E+Y   ++KLA
Sbjct:   47 DETLPLIDLSDI--HVATLVGHACTTWGAFQITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENGVSGYGVARIASFFNKKMWSEGFT--------VIGSPLHDFRKL------WPSHHLKYCEIIEEYEEHMQKLA 171          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 7.127e-12
Identity = 46/164 (28.05%), Postives = 77/164 (46.95%), Query Frame = 3
Query:   72 PAFIQPPEFRPKVQNNMEIDDEIPVIDL----STDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKLA 545
            P+F++  + RPKV ++    D +P+I L         Q+   V  AC+ WG FQVI+HG  ++L A + + A+EFF  P E+K +         G+    H +   V+DW+E+  ++                   R   +WPE P G+  + E Y+  +  L+
Sbjct:   22 PSFVRDEDERPKVAHD-RFSDAVPLISLHGIDGARRAQIRDRVAAACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRYDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVK-------------ARDYGRWPEKPAGWCAVVERYSERLMGLS 171          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 9.307e-12
Identity = 47/165 (28.48%), Postives = 84/165 (50.91%), Query Frame = 3
Query:   75 AFIQPPEFRPKVQNNMEIDDEIPVIDL------STDPKQLVLEVGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVKRDEVHPMGYHDQEHTKN--VRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKLA 545
            +FI+  + RPKV  N +  +EIP+I L      +    ++  ++  AC+ WG FQV++HG  +E+ +++   AKEFF  P EEK +         G+    H +   V+DW+E+  ++   PT              R  ++WP+ P G+  + + Y+ ++ +LA
Sbjct:   21 SFIRDEDERPKVAYN-QFSNEIPIISLEGIDDETGKRAEICDKIVKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYF-SYPT------------RARDYSRWPDKPEGWIAVTQKYSEKLMELA 171          
BLAST of FC921587 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.537e-11
Identity = 46/161 (28.57%), Postives = 77/161 (47.83%), Query Frame = 3
Query:   78 FIQPPEFRPKVQNNMEIDDEIPVIDLSTDPKQLVLE-VGHACQKWGFFQVINHGAPSELKARIEKAAKEFFGQPIEEKQKVKRDE----VHPMGYHDQEHTKNVRDWKEVFDFWLQDPTFLPASPEPDDKELRRLTNQWPEYPLGFRELCEDYAREVEKLA 545
            FI+  + +P +         IPV+DLS   ++ V   V  A ++WG FQV+NHG P+EL  R++   ++FF  P  EK+ V + E    +   G   Q+  +  + W +     +  P+ +                 WP+ P  +RE+ E+YA  V+KL+
Sbjct:   23 FIRSEKEQPAITTFRGPTPAIPVVDLSDPDEESVRRAVVKASEEWGLFQVVNHGIPTELIRRLQDVGRKFFELPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVN-------------YRFWPKNPPEYREVNEEYAVHVKKLS 170          
The following BLAST results are available for this feature:
BLAST of FC921587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
FLS_CITUN1.099e-1230.51Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
G3OX1_ARATH1.436e-1232.86Gibberellin 3-beta-dioxygenase 1 OS=Arabidopsis th... [more]
FL3H_MALDO4.178e-1227.44Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
G3OX2_ARATH5.457e-1234.04Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
FL3H_HORVU7.127e-1228.05Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
FL3H_PETHY9.307e-1228.48Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FLS1_ARATH3.537e-1128.57Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionC32107A10EF RVDevelopN Citrus clementina cDNA clone C32107A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921587 ID=FC921587; Name=FC921587; organism=Citrus clementina; type=EST; length=592bp
GGAAGTTCTCCCACATACACAATCACAAACAGAAATATAATCTGCTGGTT
TCAATCATGGGAGATGTTGATCCAGCCTTCATTCAACCCCCTGAATTCAG
ACCAAAGGTTCAAAACAACATGGAAATAGATGATGAAATCCCAGTTATTG
ATCTCTCTACCGACCCCAAACAACTTGTCTTGGAAGTTGGCCATGCATGT
CAAAAGTGGGGATTTTTTCAAGTCATCAATCATGGGGCGCCATCAGAATT
AAAGGCCAGGATTGAAAAGGCAGCAAAAGAATTCTTTGGTCAACCAATAG
AGGAGAAGCAGAAAGTGAAAAGAGATGAAGTTCATCCTATGGGATATCAT
GACCAGGAGCATACCAAGAATGTTAGGGACTGGAAGGAAGTGTTTGATTT
TTGGTTGCAAGATCCAACTTTTCTCCCAGCTTCTCCTGAGCCTGATGATA
AGGAGCTGAGGAGGCTCACTAACCAATGGCCTGAGTACCCTCTTGGATTT
AGGGAGTTATGTGAGGATTATGCTAGGGAGGTGGAAAAGCTAGCTTACAG
TTACTGGAACTTATCTCCCTCAGCTTAGGCTTATCTGCTGAT
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