FC921590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 2.023e-53 Identity = 104/157 (66.24%), Postives = 129/157 (82.17%), Query Frame = 3 Query: 177 MAFPNELAAGREELSPKRKMG-RGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISR 644 +A P +G K+G RGKIEIKRIENTTNRQVTFCKRR+GLLKKAYELSVLCDAEV+L+VFSSRGRLYEYSNNSVK TI+RYKKA +DTSN ++ E NAQ YQQEAAKL+ QI+N+QNSNR ++G++++ +N +ELK +E RL+KG+ + Sbjct: 23 VASPGSGGSGGSGSVGAEKIGSRGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKETIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGK 179
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MAD13_ORYSJ (MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica GN=MADS13 PE=1 SV=2) HSP 1 Score: 195.282 bits (495), Expect = 2.315e-49 Identity = 102/140 (72.86%), Postives = 125/140 (89.29%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYS-NNSVKSTIDRYKKATADTSNTGS-ICEANA-QFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISR 644 MGRG+IEIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEV+LIVFSSRGRLYEYS NN+VK+TIDRYKKA A S +G+ + E NA Q+YQQE+AKLR QI +QN+N++++G+++S L+ KELK +E+RLEKGIS+ Sbjct: 1 MGRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNNNVKATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSLKELKQLESRLEKGISK 140
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MAD21_ORYSJ (MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica GN=MADS21 PE=2 SV=1) HSP 1 Score: 194.897 bits (494), Expect = 3.023e-49 Identity = 96/139 (69.06%), Postives = 121/139 (87.05%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSN-NSVKSTIDRYKKATADTSNTGSICEANA-QFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISR 644 MGRGKIEIKRIEN T+RQVTFCKRRNGLLKKAYEL++LCDAE++LIVFSSRGRLYE+SN NS +STI+RYKKA+A TS + + + N+ Q++QQEAAK+R QI +QN+NR+++GES+ + KELK++E RLEKGISR Sbjct: 1 MGRGKIEIKRIENKTSRQVTFCKRRNGLLKKAYELAILCDAEIALIVFSSRGRLYEFSNVNSTRSTIERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAKELKSLENRLEKGISR 139
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MAD27_ORYSJ (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica GN=MADS27 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.721e-36 Identity = 76/132 (57.58%), Postives = 103/132 (78.03%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLE 629 MGRGKI I+RI+N+T+RQVTF KRRNG+ KKA EL++LCDAEV L++FSS GRLYEYS+ S+KS IDRY K + D + + +F+Q+EAA LR Q+ N+Q ++R ++GE LSGLN KEL+++E +LE Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSSTSMKSVIDRYGK-SKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLNVKELQSLENQLE 131
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.457e-35 Identity = 74/135 (54.81%), Postives = 104/135 (77.04%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGI 638 MGRGKIEIKRI+N T+RQVTF KRR+GL KKA ELS+LCDAEV L+VFSS RLY+++++S+KS I+RY + D T + + A+ +QQEAA LR Q+ N+Q +R +LG+ LSGL+ ++L+N+E++LE + Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSSMKSIIERYNETKEDPHQTMN-ASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSL 134
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 3.245e-35 Identity = 74/132 (56.06%), Postives = 100/132 (75.76%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLE 629 MGRGKI I+RI+N+T+RQVTF KRRNGLLKKA ELS+LCDAEV L+VFSS GRLYE+S+ ++K+ IDRY A + G + + +Q+EAA LR Q+ N+Q S++ ++GE LSGL ++L+ +E RLE Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTNMKTVIDRYTNAKEEL--LGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLE 130
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 6.120e-34 Identity = 70/135 (51.85%), Postives = 100/135 (74.07%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGI 638 M RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVSLI+FS +G+LYE+++++++ TIDRY + T D +T + E N Q + EAA + +I ++ S R +LGE + + +EL+ +E +LEK + Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASSNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSV 135
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MAD17_ORYSJ (MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica GN=MADS17 PE=1 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 7.993e-34 Identity = 70/139 (50.36%), Postives = 100/139 (71.94%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGS-ICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISRS 647 MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEV+LI+FSSRG+LYE+ + + T+++Y + + S + Q + QE ++L+ ++ +Q S R+MLGE L L+ KEL+ +E +LE +S++ Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSAGINKTLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKELQQLEKQLEYSLSQA 139
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: AGL9_PETHY (Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida GN=FBP2 PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.363e-33 Identity = 76/139 (54.68%), Postives = 101/139 (72.66%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY-SNNSVKSTIDRYKKATADTSNTG-SICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISR 644 MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEV+LI+FS+RG+LYE+ S++S+ T++RY+K T S EA QQE KL+ + +Q S RN+LGE L LN KEL+++E +L+ + + Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLKTLERYQKCNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLERQLDMSLKQ 139
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: AGL6_ARATH (Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6 PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 1.781e-33 Identity = 72/136 (52.94%), Postives = 100/136 (73.53%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGIS 641 MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEV+LI+FSSRG+LYE+ + ++STI+RY + + S + + E Q + QE KL+ + ++ +NRN+LGE L + KEL+ +E +LE ++ Sbjct: 1 MGRGRVEMKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFGSVGIESTIERYNRC-YNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKELQALERQLEAALT 135 The following BLAST results are available for this feature:
BLAST of FC921590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921590 ID=FC921590; Name=FC921590; organism=Citrus clementina; type=EST; length=649bpback to top |