FC921590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.667e-31 Identity = 72/138 (52.17%), Postives = 100/138 (72.46%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQF-----YQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLE 629 MGRGK+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEV+LI+FS+RGRL+E+S +S + T++RY+ + ++ CEA+A QE KL+ ++ +Q + RN+LGE L L+ KEL+ +E ++E Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNS----CEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIE 134
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MADS5_ORYSI (MADS-box transcription factor 5 OS=Oryza sativa subsp. indica GN=MADS5 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.667e-31 Identity = 72/138 (52.17%), Postives = 100/138 (72.46%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQF-----YQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLE 629 MGRGK+E+KRIEN +RQVTF KRRNGLLKKAYELSVLCDAEV+LI+FS+RGRL+E+S +S + T++RY+ + ++ CEA+A QE KL+ ++ +Q + RN+LGE L L+ KEL+ +E ++E Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSTRGRLFEFSTSSCMYKTLERYRSCNYNLNS----CEASAALETELSNYQEYLKLKTRVEFLQTTQRNLLGEDLVPLSLKELEQLENQIE 134
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: AGL21_ARATH (Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana GN=AGL21 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.177e-31 Identity = 66/132 (50.00%), Postives = 101/132 (76.52%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLE 629 MGRGKI I+RI+++T+RQVTF KRR GL+KKA EL++LCDAEV LI+FSS G+LY+++++S+KS IDRY K+ + + + +F+Q+EAA LR ++ +Q ++R M+GE L+GL+ EL ++E ++E Sbjct: 1 MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASSSMKSVIDRYNKSKIEQQQLLNPA-SEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSVNELNSLENQIE 131
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.713e-31 Identity = 73/138 (52.90%), Postives = 98/138 (71.01%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISR 644 M RG+ E+KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEV+LIVFS RGRLYE+ S S++ TIDRYK T D N +I + + Q + + L ++ + S R +LGE+L G + +EL+ +E +LEK + + Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTI-QQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHK 137
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSJ (MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica GN=MADS1 PE=1 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 6.334e-31 Identity = 67/138 (48.55%), Postives = 99/138 (71.74%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISR 644 MGRGK+E+KRIEN +RQVTF KRRNGLLKKAYELS+LCDAEV+LI+FS RGRL+E+S++S + T++RY+ ++ + + + QE KL+ ++ +Q + RN+LGE L L+ KEL+ +E ++E + + Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAA---PENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQ 135
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MADS1_ORYSI (MADS-box transcription factor 1 OS=Oryza sativa subsp. indica GN=MADS1 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 6.334e-31 Identity = 67/138 (48.55%), Postives = 99/138 (71.74%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISR 644 MGRGK+E+KRIEN +RQVTF KRRNGLLKKAYELS+LCDAEV+LI+FS RGRL+E+S++S + T++RY+ ++ + + + QE KL+ ++ +Q + RN+LGE L L+ KEL+ +E ++E + + Sbjct: 1 MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSLLCDAEVALIIFSGRGRLFEFSSSSCMYKTLERYRSCNYNSQDAAA---PENEINYQEYLKLKTRVEFLQTTQRNILGEDLGPLSMKELEQLENQIEVSLKQ 135
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 6.334e-31 Identity = 73/136 (53.68%), Postives = 97/136 (71.32%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGI 638 M RG+ E+KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEV+LIVFS RGRLYE+ S S++ TIDRYK T D N +I + + Q + + L ++ + S R +LGE+L G + +EL+ +E +LEK + Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTI-QQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEELRGLEMKLEKSL 135
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 134.035 bits (336), Expect = 6.334e-31 Identity = 66/135 (48.89%), Postives = 99/135 (73.33%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGI 638 MGRGKI IKRI+NT NRQVTF KRR GL+KKA EL++LCDA+V LIVFS GRLY++S++S+KS I+RY++A + + + A+F+Q+E LR Q+ N+ ++NR +LGE +S ++L+ ++ ++E + Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSSMKSIIERYQEAGEEHCRLLNPM-SEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSL 134
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: SEP3_ARATH (Developmental protein SEPALLATA 3 OS=Arabidopsis thaliana GN=SEP3 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 8.272e-31 Identity = 73/141 (51.77%), Postives = 101/141 (71.63%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY-SNNSVKSTIDRYKKAT--ADTSNTGSICEANAQF-YQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISR 644 MGRG++E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEV+LI+FS+RG+LYE+ S++S+ T++RY+K A N S + QQE KL+ + +Q + RN+LGE L L+ KEL+++E +L+ + + Sbjct: 1 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSSSSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQRTQRNLLGEDLGPLSTKELESLERQLDSSLKQ 141
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.080e-30 Identity = 66/137 (48.18%), Postives = 99/137 (72.26%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISR 644 M RGK E+KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEV+L++FS R +LYE+S++S+ +TI+RY++ + N + N+Q + E + L +I ++ S R +LGE + + +EL+ +E +L++ +SR Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSSSIAATIERYQRRIKEIGNNHKRND-NSQQARDETSGLTKKIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSLSR 136 The following BLAST results are available for this feature:
BLAST of FC921590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921590 ID=FC921590; Name=FC921590; organism=Citrus clementina; type=EST; length=649bpback to top |