FC921590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.253e-27 Identity = 62/133 (46.62%), Postives = 94/133 (70.68%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLE 629 MGRG ++++RIEN NRQVTF KRRNGLLKKA+E+SVLCDA+V+LIVFS++G+LYE+ S++S++ ++RY++ + D + + + E L+ ++ +Q S R +LGE L L KEL+ +E +LE Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLE 133
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSI (MADS-box transcription factor 18 OS=Oryza sativa subsp. indica GN=MADS18 PE=2 SV=2) HSP 1 Score: 121.709 bits (304), Expect = 3.253e-27 Identity = 62/133 (46.62%), Postives = 94/133 (70.68%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLE 629 MGRG ++++RIEN NRQVTF KRRNGLLKKA+E+SVLCDA+V+LIVFS++G+LYE+ S++S++ ++RY++ + D + + + E L+ ++ +Q S R +LGE L L KEL+ +E +LE Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLEHQLE 133
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.248e-27 Identity = 61/136 (44.85%), Postives = 94/136 (69.12%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGI 638 MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EY+ +S ++ ++RY++ + + + E AKL+ ++ +Q + + +GE L LN KEL+N+E +L + Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASAL 136
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: AP1_SINAL (Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.108e-26 Identity = 61/137 (44.53%), Postives = 97/137 (70.80%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKK-ATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGI 638 MGRG++++KRIEN NRQVTF KRR GLLKKA+E+SVLCDAEV+L+VFS +G+L+EYS +S ++ ++RY++ + A+ + N + E +L+ +I ++ + R+ LGE L ++ KEL+N+E +L+ + Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTAL 136
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: AP1_ARATH (Floral homeotic protein APETALA 1 OS=Arabidopsis thaliana GN=AP1 PE=1 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 3.596e-26 Identity = 61/137 (44.53%), Postives = 97/137 (70.80%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKK-ATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGI 638 MGRG++++KRIEN NRQVTF KRR GLLKKA+E+SVLCDAEV+L+VFS +G+L+EYS +S ++ ++RY++ + A+ + N + E +L+ +I ++ + R+ LGE L ++ KEL+N+E +L+ + Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTDSCMEKILERYERYSYAERQLIAPESDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTAL 136
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.012e-26 Identity = 65/139 (46.76%), Postives = 89/139 (64.03%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSN--NSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISR 644 MGRGKIE+KRIEN T+RQVTF KRR GLLKK +ELSVLCDA++ LI+FSS+G+L+EY + +S+ I RY T+ E N E AK+R N+Q S + G+ LS ++EL +E +LE +++ Sbjct: 4 MGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRY----LQTTGASLPVEDNRVQLYDEVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNK 138
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.785e-25 Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSN--NSVKSTIDRYKKATADTSNTGSIC-EANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGI 638 MGRGKIEIKRIEN+TNRQVTF KRR+G+LKKA E+SVLCDAEV +++FSS G+LY+Y + S+ +++Y+ +N+G I + + E +++ + NMQ R++ GE L+ L KEL +E L+ GI Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQ------TNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGI 132
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.045e-25 Identity = 62/137 (45.26%), Postives = 87/137 (63.50%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISR 644 M R KI+IK+I+N+T RQVTF KRR GL KKA ELSVLCDA+V+LI+FSS G+L++YS++S+K ++R + + ++L +IS + R M GE L GLN +EL+ +E LE G+SR Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSR 137
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida GN=PMADS2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.193e-25 Identity = 61/138 (44.20%), Postives = 92/138 (66.67%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS--VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGIS 641 MGRGKIEIKRIEN++NRQVT+ KRRNG++KKA E++VLCDA+VSLI+F + G+++EY + S + +D Y+K + + +A + E +++ + NMQ R++ GE ++ LN KEL +E L G+S Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTSG-----RRLWDAKHENLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLS 133
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 6.782e-25 Identity = 64/142 (45.07%), Postives = 93/142 (65.49%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNN--SVKSTIDRYKKATA---DTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGISR 644 MGRGKIE+KRIEN T+RQVTF KRR+GL+KK +ELSVLCDA++ LIVFS++G+L EY S+K IDRY KA + N N Q +E +++ + N+Q + + G+ LS + F+EL +E L++ +++ Sbjct: 1 MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVI-KELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNK 141 The following BLAST results are available for this feature:
BLAST of FC921590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921590 ID=FC921590; Name=FC921590; organism=Citrus clementina; type=EST; length=649bpback to top |