FC921590
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: FLC_ARATH (MADS-box protein FLOWERING LOCUS C OS=Arabidopsis thaliana GN=FLC PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.496e-19 Identity = 54/137 (39.42%), Postives = 84/137 (61.31%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSN-NSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGIS 641 MGR K+EIKRIEN ++RQVTF KRRNGL++KA +LSVLCDA V+L+V S+ G+LY +S+ +++ +DRY K AD + A +Q +A ++ + ++G ++ ++ L +E LE +S Sbjct: 1 MGRKKLEIKRIENKSSRQVTFSKRRNGLIEKARQLSVLCDASVALLVVSASGKLYSFSSGDNLVKILDRYGKQHAD--------DLKALDHQSKALNYGSHYELLELVDSKLVGSNVKNVSIDALVQLEEHLETALS 129
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: CMB2_DIACA (MADS-box protein CMB2 OS=Dianthus caryophyllus GN=CMB2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.561e-19 Identity = 55/137 (40.15%), Postives = 81/137 (59.12%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNN--SVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGI 638 MGRGK+EI++IEN TNRQVTF KRRNG++KKA EL+VLCDA+VSL++ SS +L+ Y + S+K D Y+K + + Q++ K+ S ++ +G L GL EL ++ +E+ I Sbjct: 1 MGRGKLEIRKIENKTNRQVTFSKRRNGIMKKAQELTVLCDAKVSLLMISSTHKLHHYLSPGVSLKKMYDEYQKIEG-----VDLWRKQWERMQEQHRKVLELNSLLRREISRRMGGDLEGLTLVELSALQQEMEEAI 132
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.113e-18 Identity = 57/137 (41.61%), Postives = 75/137 (54.74%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY--SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETRLEKGI 638 MGRGKIEIK+IEN T RQVTF KRR GL+KK ELS+LCDA + LIVFS+ G+L E+ N + IDRY + + E LR + N++ R G L+ + EL +E +LE + Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGKLSEFCSEQNRMPQLIDRYLHTNGLRLPDH---HDDQEQLHHEMELLRRETCNLELRLRPFHGHDLASIPPNELDGLERQLEHSV 134
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: SRFC_DICDI (Serum factor response C OS=Dictyostelium discoideum GN=srfC PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.798e-17 Identity = 42/79 (53.16%), Postives = 57/79 (72.15%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNT 470 MGR KI I++I N NRQ TF KR+NGL+KKA ELS+LCD E+++IVFSS +L++YS+ + + RY T +T NT Sbjct: 3 MGRNKITIEKISNERNRQATFTKRKNGLIKKAMELSILCDCEIAMIVFSSNNKLFQYSSRDMDKLLIRY---TDNTDNT 78
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: AGL31_ARATH (Agamous-like MADS-box protein AGL31 OS=Arabidopsis thaliana GN=AGL31 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.583e-16 Identity = 46/117 (39.32%), Postives = 75/117 (64.10%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYE-YSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQ----QEAAKLRIQISNMQNSNRNML 569 MGR K+EIKRIEN ++RQVTF KRRNGL++KA +LS+LC++ ++++V S G+LY+ S +++ IDRY+ AD + E + E + +++ SN+ N++ + L Sbjct: 1 MGRKKVEIKRIENKSSRQVTFSKRRNGLIEKARQLSILCESSIAVLVVSGSGKLYKSASGDNMSKIIDRYEIHHADELEALDLAEKTRNYLPLKELLEIVQSKLEESNVDNASVDTL 117
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MAD32_ORYSJ (MADS-box transcription factor 32 OS=Oryza sativa subsp. japonica GN=MADS32 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.406e-16 Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSN---NSVKSTIDRYKKAT-------------ADTSNTGSICE 485 MGRG+ EIKRIEN T RQ TF KRR+GL KKA EL+VLCDA++ L++FS+ G+LY + + SV+ ++RY+ T A+ GS+C+ Sbjct: 1 MGRGRSEIKRIENPTQRQSTFYKRRDGLFKKARELAVLCDADLLLLLFSASGKLYHFLSPTVPSVREFVERYEATTHTKVWADIRQERRAELEKVGSMCD 100
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MEF2_DROME (Myocyte-specific enhancer factor 2 OS=Drosophila melanogaster GN=Mef2 PE=1 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.187e-15 Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRY 440 MGR KI+I RI + NRQVTF KR+ G++KKAYELSVLCD E++LI+FSS +LY+Y++ + + +Y Sbjct: 1 MGRKKIQISRITDERNRQVTFNKRKFGVMKKAYELSVLCDCEIALIIFSSSNKLYQYASTDMDRVLLKY 69
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MEF2B_HUMAN (Myocyte-specific enhancer factor 2B OS=Homo sapiens GN=MEF2B PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.856e-15 Identity = 38/69 (55.07%), Postives = 53/69 (76.81%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRY 440 MGR KI+I RI + NRQVTF KR+ GL+KKAYELSVLCD E++LI+F+S RL++Y++ + + +Y Sbjct: 1 MGRKKIQISRILDQRNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSANRLFQYASTDMDRVLLKY 69
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MEF2C_PONAB (Myocyte-specific enhancer factor 2C OS=Pongo abelii GN=MEF2C PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.872e-15 Identity = 37/69 (53.62%), Postives = 53/69 (76.81%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRY 440 MGR KI+I RI + NRQVTF KR+ GL+KKAYELSVLCD E++LI+F+S +L++Y++ + + +Y Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKY 69
BLAST of FC921590 vs. ExPASy Swiss-Prot
Match: MEF2C_PIG (Myocyte-specific enhancer factor 2C OS=Sus scrofa GN=MEF2C PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.872e-15 Identity = 37/69 (53.62%), Postives = 53/69 (76.81%), Query Frame = 3 Query: 234 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRY 440 MGR KI+I RI + NRQVTF KR+ GL+KKAYELSVLCD E++LI+F+S +L++Y++ + + +Y Sbjct: 1 MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYASTDMDKVLLKY 69 The following BLAST results are available for this feature:
BLAST of FC921590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921590 ID=FC921590; Name=FC921590; organism=Citrus clementina; type=EST; length=649bpback to top |