FC921610

Overview
NameFC921610
Unique NameFC921610
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921610 vs. ExPASy Swiss-Prot
Match: ANXA2_CHICK (Annexin A2 OS=Gallus gallus GN=ANXA2 PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 6.566e-16
Identity = 57/165 (34.55%), Postives = 83/165 (50.30%), Query Frame = 2
Query:   44 STMATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDV 538
            S  AT+K  +    A  DA  L  A +  G +E  II++L +R+  QR+ I   Y     ++L  AL   LS   E  +L    TP++ DA     A K L +    L+EI C+R++++L    + Y   YK  LE+D+   TSGDFRKL+V L    R +   V
Sbjct:   22 SAYATVKAYSNF-DADRDAAALEAAIKTKGVDEVTIINILTNRSNEQRQDIAFAYQRRTKKELSAALKSALSGHLEAVILGLLKTPSQYDASELKAAMKGLGTDEDTLIEIICSRTNQELNEINRVYREMYKTELEKDIISDTSGDFRKLMVALAKGKRCEDTSV 185          
BLAST of FC921610 vs. ExPASy Swiss-Prot
Match: ANXA2_RAT (Annexin A2 OS=Rattus norvegicus GN=Anxa2 PE=1 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.575e-16
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 2
Query:   86 AAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDV 538
            A  DA  +  A +  G +E  I+++L +R+ AQR+ I   Y     ++L  A+   LS   E  +L    TPA+ DA     + K L +    L+EI C+R++++L    + Y   YK  LE+D+   TSG+FRKLLV L    R + G V
Sbjct:   35 AERDALNIETAIKTKGVDEVTIVNILTNRSNAQRQDIAFAYQRRTKKELPSAMKSALSGHLETVMLGLLKTPAQYDASELKASMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGEFRKLLVALAKGKRAEDGSV 185          
BLAST of FC921610 vs. ExPASy Swiss-Prot
Match: ANX2B_XENLA (Annexin A2-B OS=Xenopus laevis GN=anxa2-B PE=2 SV=3)

HSP 1 Score: 82.0333 bits (201), Expect = 3.259e-15
Identity = 53/166 (31.93%), Postives = 88/166 (53.01%), Query Frame = 2
Query:   41 KSTMATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDV 538
            +S + ++K  T    A +DA  +  A +  G +E  II++L +R+  QR+ I   ++    +DL  AL   LS + E  +L    T  + DA     + K L +    L+EI C+R++++L   + AY   +K  LE+D+   TSGDFRKL+V L    R + G++
Sbjct:   22 QSKLGSVKAATHF-DAEKDAAAIETAIKTKGVDELTIINILTNRSNEQRQDIAFAFHRRTKKDLPSALKGALSGNLETVMLGLIKTRPQYDASELKASMKGLGTDEDTLIEIICSRTNKELLDIQNAYRELFKTELEKDIMSDTSGDFRKLMVALAKGRRQEDGNM 186          
BLAST of FC921610 vs. ExPASy Swiss-Prot
Match: ANXA1_RODSP (Annexin A1 OS=Rodentia sp. GN=ANXA1 PE=2 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 8.026e-14
Identity = 52/169 (30.77%), Postives = 81/169 (47.93%), Query Frame = 2
Query:   68 PTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPLVSTFRYDGGDVNMMLARTEAKII 574
            P+  PS+  D   LHK     G +EA I+ +L  R  AQR  ++ +Y +  GE L + L K L+   +  +L    TPA+ D      A K + +    L+EI  TRS++ +      Y    KK + +     TSG+FR  L+ L    R +   VN  +A T+A+ +
Sbjct:   40 PSFDPSS--DVAALHKGIMVNGVDEATILDLLTKRYNAQRHHLKAVYIQETGEPLDETLKKALTGHIQELLLAMIKTPAQFDGNELRAAMKAVGTDEETLIEILWTRSNQQIREITSVYREELKKDIAKYQTSDTSGEFRDALLALAKGNRCEDMSVNQDIADTDARAL 206          
BLAST of FC921610 vs. ExPASy Swiss-Prot
Match: ANXA9_MOUSE (Annexin A9 OS=Mus musculus GN=Anxa9 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 8.874e-13
Identity = 53/166 (31.93%), Postives = 81/166 (48.80%), Query Frame = 2
Query:    8 SSFSILQKR*NKSTMATLKVPTQTPSAAEDAEQLHKAFQGWGTNEALIISVLAHRNAAQRKLIREIYNETYGEDLLKALDKELSSDFERSVLLWTLTPAERDAYLANEATKRLTSSNWVLMEIACTRSSRDLFAAKQAYHARYKKSLEEDVAYHTSGDFRKLLVPL 505
            SS  +  K     T+ TL+      S  +D ++L KA  G G +   I+ VL +R+  QR+LI   + E   +DLLK+L   LS + E+ V+      A+ DA     A K   S+  V +EI  TR++  L A    Y   ++   EED+   T+G  + LL+ L
Sbjct:   18 SSLGLADKTAAWGTLGTLRTFLSF-SVDKDVQRLLKAIAGQGVDYDTIVDVLTNRSREQRQLISRAFQERTKQDLLKSLQAALSGNLEKIVVALLQPAAQFDAQELRTALKTSGSAEDVALEILATRAAPGLQACLAVYKHDFQVEAEEDIRTETNGILQDLLLAL 182          
The following BLAST results are available for this feature:
BLAST of FC921610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ANXA2_CHICK6.566e-1634.55Annexin A2 OS=Gallus gallus GN=ANXA2 PE=1 SV=2[more]
ANXA2_RAT8.575e-1634.44Annexin A2 OS=Rattus norvegicus GN=Anxa2 PE=1 SV=2[more]
ANX2B_XENLA3.259e-1531.93Annexin A2-B OS=Xenopus laevis GN=anxa2-B PE=2 SV=... [more]
ANXA1_RODSP8.026e-1430.77Annexin A1 OS=Rodentia sp. GN=ANXA1 PE=2 SV=3[more]
ANXA9_MOUSE8.874e-1331.93Annexin A9 OS=Mus musculus GN=Anxa9 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionC32107C10EF RVDevelopN Citrus clementina cDNA clone C32107C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921610 ID=FC921610; Name=FC921610; organism=Citrus clementina; type=EST; length=694bp
GACTGCCTCGTCATTTTCTATTTTACAAAAACGCTGAAACAAATCGACAA
TGGCGACCCTTAAAGTGCCAACCCAGACCCCTTCTGCTGCTGAGGATGCT
GAGCAACTCCACAAAGCCTTCCAAGGATGGGGCACGAATGAGGCCCTCAT
TATATCTGTCTTGGCTCACAGAAATGCAGCTCAGCGCAAGTTGATTCGAG
AAATCTACAACGAAACTTATGGGGAAGACCTTCTTAAAGCACTGGACAAA
GAACTTTCAAGTGACTTTGAGAGATCTGTACTGCTATGGACATTGACTCC
TGCTGAGCGTGATGCTTATTTGGCAAATGAAGCGACAAAGAGATTGACTT
CAAGCAACTGGGTTCTCATGGAAATTGCCTGTACTAGATCTTCAAGAGAC
CTATTTGCTGCAAAGCAGGCCTACCATGCTCGTTACAAGAAATCCCTAGA
GGAAGATGTTGCATATCACACATCTGGGGACTTCCGCAAGCTTTTGGTTC
CTCTTGTGAGCACATTTCGATATGATGGAGGAGATGTGAACATGATGTTG
GCAAGAACTGAGGCTAAGATTATCCGTGACAAGATTTCAGACAAGGATTA
TGCTCATGAGGAGCTTATCAGGATTCTGAACTACAAGGAGCAGGCACAGA
TAAATGCGACCCTCAATCACTACNATGATGCTTTTGGAATGCCA
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