FC921622

Overview
NameFC921622
Unique NameFC921622
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: CRK41_ARATH (Cysteine-rich receptor-like protein kinase 41 OS=Arabidopsis thaliana GN=CRK41 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.667e-33
Identity = 76/199 (38.19%), Postives = 117/199 (58.79%), Query Frame = 1
Query:   34 NVIGTGSSGVVYRVTIPNGETLAVKK--MWSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA-DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLQ 621
            N +G G  G VY+  +  GE +AVK+  M S      F +E+  +  ++H+N+VRLLG+      ++L Y++  N SL   +  + +    DWE RY ++ GVA  L YLH D    I+H D+KA NVLL       +ADFG+A++      D  S+T    ++AG+YGYMAPE+A     + K+DV+SFGV++LE+++
Sbjct:  348 NQLGEGGFGAVYKGVLDYGEEIAVKRLSMKSGQGDNEFINEVSLVAKLQHRNLVRLLGFCLQGEERILIYEFFKNTSLDHYIFDSNRRMILDWETRYRIISGVARGLLYLHEDSRFKIVHRDMKASNVLLDDAMNPKIADFGMAKLFD---TDQTSQTRFTSKVAGTYGYMAPEYAMSGEFSVKTDVFSFGVLVLEIIK 543          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.177e-33
Identity = 80/213 (37.56%), Postives = 123/213 (57.75%), Query Frame = 1
Query:    1 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLGWGS-----NKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            I     N +  N+IG G  G V++  +P+G  +A K+  +    G   F+ E++ + SIRH N++ L G+ +       + +++  D + NGSL   L G  +    W  R  + LG+A  LAYLH+   P I+H D+KA N+LL   ++A +ADFGLA+       +    T+   ++AG+ GY+APE+A   ++TEKSDVYSFGVVLLE+L
Sbjct:  276 IKKATNNFSRHNIIGRGGYGNVFKGALPDGTQVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEAQLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKF------NPEGMTHMSTRVAGTMGYVAPEYALYGQLTEKSDVYSFGVVLLELL 482          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.177e-33
Identity = 78/209 (37.32%), Postives = 117/209 (55.98%), Query Frame = 1
Query:    1 IDDVVRNLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHG-AGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            I+    N   +N +G G  G V++ T PNG  +AVK++      G   F +E+  +  ++H+N+VRLLG+      K+L Y+Y+PN SL   L     +G  DW  RY ++ GV   + YLH D    I+H D+KA N+LL       +ADFG+AR       D    T  R  + G++GYM PE+ +  + + KSDVYSFGV++LE++
Sbjct:  328 IEAATNNFQKSNKLGHGGFGEVFKGTFPNGTEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRRGQLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGVAR---NFRVDQTEATTGR--VVGTFGYMPPEYVANGQFSMKSDVYSFGVLILEII 531          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.177e-33
Identity = 77/196 (39.29%), Postives = 118/196 (60.20%), Query Frame = 1
Query:   40 IGTGSSGVVYRVTIPNGETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA-DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            +G G SG V++  +P+G+ +AVK++    E     F +E+  +  ++H+N+VRLLG+      K++ Y+YLPN SL  +L    K G  DW+ RY+++ G A  + YLH D  P I+H D+KA N+LL       +ADFG ARI     D + + T      AG+ GYMAPE+  +   + KSDVYS+GV++LE++
Sbjct:  364 LGHGGSGHVFKGRLPDGKEIAVKRLSEKTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDPTKQGELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIF--GMDQSVAIT---ANAAGTPGYMAPEYMELGEFSMKSDVYSYGVLVLEII 554          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.844e-33
Identity = 82/202 (40.59%), Postives = 119/202 (58.91%), Query Frame = 1
Query:   19 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            N   + VIG G  G+V+R ++ +   +AVK+       G   F SEI  L  IRH+++V L+G+   ++  +L Y+Y+  G L S L+G+      W+ R EV +G A  L YLH      I+H D+K+ N+LL   Y A +ADFGL+R  SG   D   +T+    + GS+GY+ PE+   Q++T+KSDVYSFGVVL EVL
Sbjct:  488 NFDRSLVIGVGGFGMVFRGSLKDNTKVAVKRGSPGSRQGLPEFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYMDKGPLKSHLYGSTNPPLSWKQRLEVCIGAARGLHYLHTGSSQGIIHRDIKSTNILLDNNYVAKVADFGLSR--SGPCID---ETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVL 684          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.844e-33
Identity = 81/203 (39.90%), Postives = 119/203 (58.62%), Query Frame = 1
Query:   19 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSD-ESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA--DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            N +S N+  +  +GV Y+  +P+G  LAVK++ +       F SE+  LG +RH N+V LLG+   ++ +LL Y ++ NG+L S LH  G   A  DW  R  + +G A  LA+LHH C PP LH  + +  +LL   + A + D+GLA++V GS D N S  N      G  GY+APE++S    + K DVY FG+VLLE++
Sbjct:  300 NFSSGNIDVSSRTGVSYKADLPDGSALAVKRLSACGFGEKQFRSEMNKLGELRHPNLVPLLGYCVVEDERLLVYKHMVNGTLFSQLHNGGLCDAVLDWPTRRAIGVGAAKGLAWLHHGCQPPYLHQFISSNVILLDDDFDARITDYGLAKLV-GSRDSNDSSFNNGD--LGELGYVAPEYSSTMVASLKGDVYGFGIVLLELV 499          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.844e-33
Identity = 81/206 (39.32%), Postives = 114/206 (55.34%), Query Frame = 1
Query:   19 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKM----WSSDESGAFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGAD--WEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            + +  N+IG GS G VYR   PNG+ +A+KK+     S  E   F   +  +  +RH NIV L G+ +    +LL Y+Y+ NG+L   LH       +  W AR +V LG A AL YLH  C+P I+H + K+ N+LL      +L+D GLA +         ++     Q+ GS+GY APE A     T KSDVY+FGVV+LE+L
Sbjct:  394 SFSQENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAALTPN------TERQVSTQVVGSFGYSAPEFALSGIYTVKSDVYTFGVVMLELL 593          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.844e-33
Identity = 76/198 (38.38%), Postives = 121/198 (61.11%), Query Frame = 1
Query:   34 NVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA-DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            N +G G  G VY+  +P+G+ +AVK++      G   F +E+  L  ++H+N+V+LLG+ +  N ++L Y+++PN SL   +    K     W+ RY ++ GVA  L YLH D    I+H D+KA N+LL       +ADFG+AR+   + D+   +T+   ++ G+YGYMAPE+    + + KSDVYSFGV+LLE++
Sbjct:  344 NKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLF--NMDETRGETS---RVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMI 536          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: CRK29_ARATH (Cysteine-rich receptor-like protein kinase 29 OS=Arabidopsis thaliana GN=CRK29 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.844e-33
Identity = 77/203 (37.93%), Postives = 120/203 (59.11%), Query Frame = 1
Query:   19 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESG--AFSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGA-DWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            N +S N +G G  G VY+   P G+ +AVK++  +   G   F +EI  L  ++H+N+VRL+G+      +LL Y+++ N SL   +    K    DW  RY+++ G+A  L YLH D    I+H D+KA N+LL       +ADFGLA++   SG     +   R  +AG+YGYMAPE+A   + + K+DV+SFGV+++E++
Sbjct:  356 NFSSENELGRGGFGSVYKGVFPQGQEIAVKRLSGNSGQGDNEFKNEILLLAKLQHRNLVRLIGFCIQGEERLLVYEFIKNASLDQFIFDTEKRQLLDWVVRYKMIGGIARGLLYLHEDSRFRIIHRDLKASNILLDQEMNPKIADFGLAKLFD-SGQTMTHRFTSR--IAGTYGYMAPEYAMHGQFSVKTDVFSFGVLVIEII 555          
BLAST of FC921622 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.844e-33
Identity = 79/202 (39.11%), Postives = 113/202 (55.94%), Query Frame = 1
Query:   19 NLTSANVIGTGSSGVVYRVTIPNGETLAVKKMWSSDESGA--FSSEIQTLGSIRHKNIVRLLGWGSNKNLKLLFYDYLPNGSLSSLLHGAGKGGADWEARYEVVLGVAHALAYLHHDCMPPILHGDVKAMNVLLGPGYQAYLADFGLARIVSGSGDDNCSKTNQRPQLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVL 618
            N   +NVIG G  G VY+  I  G  +A+KK   + E G   F +EI+ L  +RHK++V L+G+        L YDY+  G+L   L+   +    W+ R E+ +G A  L YLH      I+H DVK  N+LL   + A ++DFGL++        N +  +    + GS+GY+ PE+   Q++TEKSDVYSFGVVL EVL
Sbjct:  520 NFDESNVIGVGGFGKVYKGVIDGGTKVAIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRPQLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSKT-----GPNMNGGHVTTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVL 716          
The following BLAST results are available for this feature:
BLAST of FC921622 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK41_ARATH1.667e-3338.19Cysteine-rich receptor-like protein kinase 41 OS=A... [more]
RKF3_ARATH2.177e-3337.56Probable LRR receptor-like serine/threonine-protei... [more]
CRK16_ARATH2.177e-3337.32Putative cysteine-rich receptor-like protein kinas... [more]
CRK13_ARATH2.177e-3339.29Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
Y5241_ARATH2.844e-3340.59Probable receptor-like protein kinase At5g24010 OS... [more]
Y1719_ARATH2.844e-3339.90Probable inactive receptor kinase At1g27190 OS=Ara... [more]
SRF8_ARATH2.844e-3339.32Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
CRK36_ARATH2.844e-3338.38Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
CRK29_ARATH2.844e-3337.93Cysteine-rich receptor-like protein kinase 29 OS=A... [more]
ANX2_ARATH2.844e-3339.11Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionC32107D11EF RVDevelopN Citrus clementina cDNA clone C32107D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921622 ID=FC921622; Name=FC921622; organism=Citrus clementina; type=EST; length=723bp
ATTGATGACGTTGTCAGGAATCTAACGTCAGCTAATGTGATTGGCACTGG
AAGCTCCGGAGTTGTGTATAGAGTGACAATCCCAAATGGAGAAACACTAG
CAGTGAAGAAGATGTGGTCATCAGATGAGTCTGGTGCATTCAGCTCTGAA
ATTCAGACGCTAGGTTCAATCAGACACAAGAACATTGTGAGGCTTTTAGG
TTGGGGTTCTAACAAGAACCTGAAGCTTCTCTTCTATGATTACCTCCCCA
ATGGAAGCTTGAGCTCACTGCTGCATGGAGCAGGCAAAGGAGGAGCAGAT
TGGGAGGCTAGATATGAAGTTGTATTGGGGGTAGCTCATGCGCTTGCGTA
CTTGCATCATGATTGCATGCCTCCAATTTTGCATGGAGATGTCAAAGCAA
TGAATGTTTTGTTAGGCCCTGGATATCAAGCTTATCTTGCAGACTTTGGA
TTAGCTAGAATAGTCAGTGGCAGCGGAGACGATAATTGCTCCAAAACAAA
TCAAAGGCCTCAATTAGCTGGTTCTTATGGTTACATGGCTCCAGAACATG
CATCAATGCAGCGGATCACTGAGAAAAGTGATGTGTACAGTTTTGGTGTG
GTTCTTTTAGAGGTTTTACAGGAAGGCATCCGTTGGACCCACATTGCCAG
GTGGTGCACCTTTGGTTCAAATGGGTAGGGACCATTTAGCCAGCAAAGAG
ACCCTCTGATGTCTTGATGCTAA
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