FC921632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921632 vs. ExPASy Swiss-Prot
Match: RL19_PYRFU (50S ribosomal protein L19e OS=Pyrococcus furiosus GN=rpl19e PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.724e-25 Identity = 54/138 (39.13%), Postives = 85/138 (61.59%), Query Frame = 3 Query: 60 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRVRRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVL 473 M +LK+Q+R++A +LKCG ++W+DP +++++ A +R++I++L+K+G I +KP K SR R + E K+KGRH G G RKG + AR+ K K + KKID+ Y +Y++ KG FKNK L Sbjct: 1 MNTLKMQRRIAAEILKCGENRIWIDPERIDDVASAITREDIKRLIKEGVIKKKPIKGQSRYRAKIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKAQKKIDRKTYRMLYIRAKGGQFKNKHQL 138
BLAST of FC921632 vs. ExPASy Swiss-Prot
Match: RL19_MAIZE (60S ribosomal protein L19 (Fragment) OS=Zea mays GN=RPL19 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.242e-24 Identity = 53/62 (85.48%), Postives = 59/62 (95.16%), Query Frame = 3 Query: 69 LKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRVRR 254 LKLQKRL+AS LKCG+GKVWLDPNEV+EISMANSRQNIRKLVKDGFII+KP KIHSRSR ++ Sbjct: 1 LKLQKRLAASYLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIKKPHKIHSRSRCKK 62
BLAST of FC921632 vs. ExPASy Swiss-Prot
Match: RL19_ARCFU (50S ribosomal protein L19e OS=Archaeoglobus fulgidus GN=rpl19e PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.784e-22 Identity = 52/134 (38.81%), Postives = 79/134 (58.96%), Query Frame = 3 Query: 60 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRVRRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKN 461 ++ L LQ+RL+ASVLKCG +VW DP + +I+ A ++Q+IR+L++ G I RKP SR+R+ + K KRKGR G+G RKG + AR+P K + + +D+ Y +Y K KG F++ Sbjct: 3 VMDLSLQRRLAASVLKCGENRVWFDPAALEDIATAATKQDIRELIEQGVIKRKPVNGVSRARINKRKLQKRKGRRRGHGSRKGAKGARMPRKRMWILRIRALRKALRQMKAEGVVDRRTYRILYRKAKGGEFRS 136
BLAST of FC921632 vs. ExPASy Swiss-Prot
Match: RL19_METJA (50S ribosomal protein L19e OS=Methanocaldococcus jannaschii GN=rpl19e PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.852e-22 Identity = 48/135 (35.56%), Postives = 82/135 (60.74%), Query Frame = 3 Query: 60 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRVRRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNK 464 ++ + +Q+R++A +LKCG +VW+DP +++ + MA S+ +IR L+K+G I +K K S +RV+++KE ++KGR G G R+G AR P K + R+S KID+ +Y +Y KG F+++ Sbjct: 3 IMDVSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSR 137
BLAST of FC921632 vs. ExPASy Swiss-Prot
Match: RL19_METVA (50S ribosomal protein L19e OS=Methanococcus vannielii GN=rpl19e PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.286e-20 Identity = 45/134 (33.58%), Postives = 78/134 (58.21%), Query Frame = 3 Query: 63 VSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRVRRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNK 464 + + Q+R++A+VL CG +VW+DP + ++ MA ++ +IR L+ DG I++K K S +R + ++E KRKG+ G G R+G + AR P K + RE++KI++ Y +Y KG F+++ Sbjct: 1 MDVSTQRRIAAAVLDCGIDRVWVDPENLEKVKMAITKDDIRLLINDGIIVKKQEKGISSARKKEVQEQKRKGKRKGPGSRRGAKGARTPKKEKWMNTIRPLRTLLKELRENEKIERSSYRKLYRMAKGGAFRSR 134
BLAST of FC921632 vs. ExPASy Swiss-Prot
Match: RL19_METTH (50S ribosomal protein L19e OS=Methanobacterium thermoautotrophicum GN=rpl19e PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 8.286e-20 Identity = 48/134 (35.82%), Postives = 77/134 (57.46%), Query Frame = 3 Query: 63 VSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRVRRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNK 464 ++L QKRL+A +LK G ++W+DP ++E+S A +R +++L+KDG I KP K S R +++ + K+KGR G G KG + AR P K + R++++I+K Y +Y KG FK+K Sbjct: 1 MNLTTQKRLAADILKVGVNRIWIDPERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSYRSKKIAQQKKKGRRRGPGSIKGAKGARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYRKLYKMAKGGAFKSK 134
BLAST of FC921632 vs. ExPASy Swiss-Prot
Match: RL19_HALMA (50S ribosomal protein L19e OS=Haloarcula marismortui GN=rpl19e PE=1 SV=3) HSP 1 Score: 76.6406 bits (187), Expect = 1.513e-13 Identity = 43/132 (32.58%), Postives = 64/132 (48.48%), Query Frame = 3 Query: 60 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRVRRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVF 455 M L QKRL+A VL G+ +VW +P +I+ A +R+++R+LV +G I K K +SR R R ++ + G G G RKG AR +K + R+ + Y D+Y K G F Sbjct: 1 MTDLSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRARERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDLYDKAGGGEF 132
BLAST of FC921632 vs. ExPASy Swiss-Prot
Match: RL19E_HALSA (50S ribosomal protein L19e OS=Halobacterium salinarium GN=rpl19e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.513e-13 Identity = 47/145 (32.41%), Postives = 68/145 (46.90%), Query Frame = 3 Query: 60 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRVRRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKS 494 M L QKRL+A VL G +VW DP+ +EI+ A +R++IR+LV DG I + T+ +SR R R + G G G RKG AR K + R+ + Y +MY G F + R L + ++ Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSRGRARERDAKESYGHKKGAGSRKGKAGARQNEKREYVAGIRAQRQQLRELRDDGTLSPAQYREMYNMANGGEFDSVRRLTNYVEEN 145
BLAST of FC921632 vs. ExPASy Swiss-Prot
Match: RL19_SULAC (50S ribosomal protein L19e OS=Sulfolobus acidocaldarius GN=rpl19e PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.751e-13 Identity = 47/149 (31.54%), Postives = 72/149 (48.32%), Query Frame = 3 Query: 60 MVSLKLQKRLSASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRVRRMKEAKR-KGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKN----KRVLMESIHK 491 M +LQ+RL+A + G + +P + E+ A +R++I+KL+K+ +I P + S R++ K +R KG +G RKG AR K R++ IDKH Y +Y + KGN FKN K L + HK Sbjct: 1 MPEFQLQRRLAADIAGVGLNNIKFNPERLEEVEEALTREDIKKLIKERAVIVNPKRGISSGRLKERKHKRRSKGEGRKHGSRKGKSGARTGDKEIWINKIRKIRRYIRWLRDNNVIDKHTYRLLYKRAKGNYFKNLSDVKSYLRQMGHK 149
BLAST of FC921632 vs. ExPASy Swiss-Prot
Match: RL19_AERPE (50S ribosomal protein L19e OS=Aeropyrum pernix GN=rpl19e PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.085e-11 Identity = 44/134 (32.84%), Postives = 69/134 (51.49%), Query Frame = 3 Query: 72 KLQKRLSASVLKCGRGKVWL--DPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHS--RSRVRRMKEAKRKGRHSGYGKRKGTREARLPTKIXXXXXXXXXXXXXXKYRESKKIDKHMYHDMYMKVKGNVFKN 461 + Q+RL+A +L G ++W+ DP EI A ++ ++R L+K G I P K ++ S+VR ++ +RKGR G G+RKG ARL K R+ + ID+ Y +YM KG F++ Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHASKVRHLQ--RRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYMLAKGGTFRD 135 The following BLAST results are available for this feature:
BLAST of FC921632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921632 ID=FC921632; Name=FC921632; organism=Citrus clementina; type=EST; length=738bpback to top |