FC921637
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921637 vs. ExPASy Swiss-Prot
Match: TPC1_YARLI (Mitochondrial thiamine pyrophosphate carrier 1 OS=Yarrowia lipolytica GN=TPC1 PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.070e-11 Identity = 41/155 (26.45%), Postives = 67/155 (43.23%), Query Frame = 2 Query: 116 SEPYKGIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFV--YSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLK 574 S Y+GI ++ ++DEG+ ALW+GN + Y A F + ++ N + WK +G + Y D RT A A+ AK + + L ++ K++G G +RG + S + I Y GL+F Y +K Sbjct: 48 SRYYRGIFQTMQQIVRDEGVTALWKGNIPAELLYVFYGATQFVTYHHVNQVINAYNETAEKWKISSGAQSFIAGATAGAGATIATYPFDLFRTLFA--AQGAKNCNVKNYTSLFQTFKLIYKTEGPLGFFRGVSSSIISIAPYMGLFFASYGRVK 200 HSP 2 Score: 25.7942 bits (55), Expect = 1.070e-11 Identity = 12/32 (37.50%), Postives = 20/32 (62.50%), Query Frame = 3 Query: 9 LMGGVSAAVSKTAAAPIERVKLLIQTKMR*SR 104 L GG++ VS+ AP++ VK+ +Q + SR Sbjct: 18 LCGGIAGMVSRFCIAPLDVVKIRLQLQKDGSR 49
BLAST of FC921637 vs. ExPASy Swiss-Prot
Match: SCMC3_MOUSE (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Mus musculus GN=Slc25a23 PE=2 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.784e-11 Identity = 35/142 (24.65%), Postives = 70/142 (49.30%), Query Frame = 2 Query: 149 KRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLK 574 + +++ G+++LWRGN NV++ P A+ F + KR +++ + F +Y ++ +TRL ++ G Q+ GL+D ++ ++ +G YRG+ + +GII Y G+ +Y++LK Sbjct: 229 RNMIQEGGVLSLWRGNGINVLKIAPESAIKFMAYEQIKRAIRGQQETLHVQERFVAGSLAGATAQT----IIYPMEVLKTRLT-----LRRTG--QYKGLLDCAKRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLK 359 HSP 2 Score: 30.0314 bits (66), Expect = 1.784e-11 Identity = 14/42 (33.33%), Postives = 24/42 (57.14%), Query Frame = 3 Query: 15 GGVSAAVSKTAAAPIERVKLLIQTKMR*SRVVGYLNPTRALV 140 G V+ AVS+T AP++R+K+ +Q S + L R ++ Sbjct: 191 GAVAGAVSRTGTAPLDRLKVFMQVHASKSNRLNILGGLRNMI 232
BLAST of FC921637 vs. ExPASy Swiss-Prot
Match: SCMC3_HUMAN (Calcium-binding mitochondrial carrier protein SCaMC-3 OS=Homo sapiens GN=SLC25A23 PE=1 SV=2) HSP 1 Score: 57.3806 bits (137), Expect = 3.903e-11 Identity = 37/135 (27.41%), Postives = 65/135 (48.15%), Query Frame = 2 Query: 170 GIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLK 574 GI +LWRGN NV++ P A+ F + KR +++ + F +Y ++ +TRL ++ G Q+ GL+D R+ ++ +G YRG+ + +GII Y G+ +Y++LK Sbjct: 237 GIRSLWRGNGINVLKIAPESAIKFMAYEQIKRAILGQQETLHVQERFVAGSLAGATAQT----IIYPMEVLKTRLT-----LRRTG--QYKGLLDCARRILEREGPRAFYRGYLPNVLGIIPYAGIDLAVYETLK 360 HSP 2 Score: 31.187 bits (69), Expect = 3.903e-11 Identity = 14/43 (32.56%), Postives = 26/43 (60.47%), Query Frame = 3 Query: 15 GGVSAAVSKTAAAPIERVKLLIQTKMR*SRVVGYLNPTRALVI 143 G V+ AVS+T AP++R+K+ +Q + + L R++V+ Sbjct: 192 GAVAGAVSRTGTAPLDRLKVFMQVHASKTNRLNILGGLRSMVL 234
BLAST of FC921637 vs. ExPASy Swiss-Prot
Match: TAAC_ARATH (Thylakoid ADP,ATP carrier protein, chloroplastic OS=Arabidopsis thaliana GN=TAAC PE=1 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 3.918e-11 Identity = 51/183 (27.87%), Postives = 76/183 (41.53%), Query Frame = 2 Query: 161 KDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLK---PVVLTGKLQDSFFC*LRPWVAHH*WCWSCFLPIDTVRRRMMM 700 K+EGI W+GN VIR P A+ + +K+LF + +DG G Y LD R RLA E + + V ++ +G+A Y G S + I Y + F ++D +K P K Q S L VA +C+ P+DT+RR+M + Sbjct: 170 KEEGIKGYWKGNLPQVIRIVPYSAVQLFAYETYKKLF---RGKDGQLS-VLGRLGAGACAGMTSTLITYPLDVLRLRLA---------VEPGYRTMSQVALNMLREEGVASFYNGLGPSLLSIAPYIAINFCVFDLVKKSLPEKYQQKTQSSL---LTAVVAAAIATGTCY-PLDTIRRQMQL 335 HSP 2 Score: 31.187 bits (69), Expect = 3.918e-11 Identity = 12/27 (44.44%), Postives = 19/27 (70.37%), Query Frame = 3 Query: 6 FLMGGVSAAVSKTAAAPIERVKLLIQT 86 F G + A +K+ AP++R+KLL+QT Sbjct: 119 FFAGAFAGAAAKSVTAPLDRIKLLMQT 145
BLAST of FC921637 vs. ExPASy Swiss-Prot
Match: CMC3_CAEBR (Probable calcium-binding mitochondrial carrier CBG00135 OS=Caenorhabditis briggsae GN=CBG00135 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 5.047e-11 Identity = 41/151 (27.15%), Postives = 68/151 (45.03%), Query Frame = 2 Query: 131 GIGDCFKRTMKDEGIVALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKK---DRDGYWKWFAGNXXXXXXXXXXXXXFVYSLDYARTRLANDAKAAKKGGERQFNGLVDVYRKTMKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSLK 574 G+ C + G+ + WRGN NVI+ P A+ F D KR K + Y + FAG+ +Y ++ +TRL A ++ G+ G++ K +GI Y+G+ + +GII Y G+ +Y++LK Sbjct: 284 GVVSCVHLLHAEGGLKSFWRGNGINVIKIAPESAMKFMSYDQIKRWIQEYKGGAELTTYERLFAGSSAGAISQTA-----IYPMEVMKTRL-----ALRRTGQLD-RGMIHFAHKMYDKEGIRCFYKGYLPNLLGIIPYAGIDLTVYETLK 423 HSP 2 Score: 30.4166 bits (67), Expect = 5.047e-11 Identity = 12/36 (33.33%), Postives = 23/36 (63.89%), Query Frame = 3 Query: 15 GGVSAAVSKTAAAPIERVKLLIQTKMR*SRVVGYLN 122 GGV+ A+S+T AP +R+K+ +Q + +G ++ Sbjct: 252 GGVAGAMSRTCTAPFDRIKVYLQVNSTKTNKLGVVS 287 The following BLAST results are available for this feature:
BLAST of FC921637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921637 ID=FC921637; Name=FC921637; organism=Citrus clementina; type=EST; length=711bpback to top |