FC921640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTPD_BRAOT (Non-specific lipid-transfer protein D OS=Brassica oleracea var. italica GN=WAX9D PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.929e-18 Identity = 49/120 (40.83%), Postives = 74/120 (61.67%), Query Frame = 2 Query: 35 LMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGG-AVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 391 LMKL L+ C++ + +++ A ++C TV ++PCI Y++ AV T CC+GV +L N AR+T DRQ C CL A + + + AAGLP CG+NIPY+IS +T+C+ V+ Sbjct: 4 LMKLAC---LIFACMIVAGPITSNAALSCGTVSGYVAPCIGYLAQNAPAVPTACCSGVTSLNNMARTTPDRQQACRCLVGAANAL--PTINVARAAGLPKACGVNIPYKISKTTNCNSVK 118
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTP6_GOSHI (Non-specific lipid-transfer protein 6 OS=Gossypium hirsutum GN=LTP6 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18 Identity = 52/120 (43.33%), Postives = 72/120 (60.00%), Query Frame = 2 Query: 38 MKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGA--VTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 391 M L C++VL CL+ A ++ A ++ V + L PC+ YV A N C G+R+L +AAR DRQ C C+K + IS Y G+AAGLPG+C ++IPY+ISPS DC RV+ Sbjct: 5 MSLKLACVVVL-CLLVDAPLAQGA-ISYDQVKSSLLPCVGYVRGNNARPAPPNYCKGIRSLKSAARIRLDRQAACKCIKSLAADISDINY--GVAAGLPGQCNVHIPYKISPSIDCKRVK 120
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTP1_PHAAU (Non-specific lipid-transfer protein 1 OS=Phaseolus aureus PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.290e-18 Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 2 Query: 113 VTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQ---AVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 388 +TC V +L+ CI ++ GG V +CC GV+ + N++R+TADR+ VC+CLK AV GI+ A LPGKCG+NIPY+IS ST+C+ + Sbjct: 1 MTCGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNN-----AEALPGKCGVNIPYKISTSTNCNSI 90
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTP5_ARATH (Non-specific lipid-transfer protein 5 OS=Arabidopsis thaliana GN=LTP5 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.297e-18 Identity = 46/119 (38.66%), Postives = 73/119 (61.34%), Query Frame = 2 Query: 35 LMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 391 L+KL T LV+VC++ +A ++++A ++C V L C +Y++ GG + CC+GV+ L + AR+T DRQ C C++ A + +R G AA LPG C + I Y IS T+C+ V+ Sbjct: 4 LLKLST---LVIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGGFIPRGCCSGVQRLNSLARTTRDRQQACRCIQGAARALG-SRLNAGRAARLPGACRVRISYPISARTNCNTVR 118
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTP8_HORVU (Non-specific lipid-transfer protein Cw18 OS=Hordeum vulgare GN=CW18 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.611e-18 Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = 2 Query: 62 LVLVCLMGSAF-VSTKAQVTCRTVVNDLSPCISYVSYGG-AVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 388 L LV L+ + V+ A +TC V + L PC +Y G + + CC+GV+ L ARSTAD+Q C CLK Y G AAG+P +CG+++PY IS S DCS++ Sbjct: 9 LALVALVAAMLLVAADAAITCGQVSSALGPCAAYAKGSGTSPSAGCCSGVKRLAGLARSTADKQATCRCLKSVAGA-----YNAGRAAGIPSRCGVSVPYTISASVDCSKI 114
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTPC_ARATH (Non-specific lipid-transfer protein 12 OS=Arabidopsis thaliana GN=LTP12 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.785e-17 Identity = 45/116 (38.79%), Postives = 71/116 (61.21%), Query Frame = 2 Query: 41 KLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 388 K++T C++VL M S T++ + C TV + L+ C++Y++ G + + CC GV++LY A++T DR+ VC CLK ++G L A LP CG++IPY IS ST+C + Sbjct: 6 KIIT-CLIVLTIYMASP---TESTIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLAQTTPDRKQVCECLK--LAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSI 115
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTP1_WHEAT (Non-specific lipid-transfer protein (Fragment) OS=Triticum aestivum PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 1.805e-16 Identity = 45/108 (41.67%), Postives = 61/108 (56.48%), Query Frame = 2 Query: 65 VLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 388 V + LM +A + C V + + PC+SYV G + CC+GV+ L+N ARS +DRQ+ C CLK GI A +P KCG+N+PY IS + DCSRV Sbjct: 8 VALVLMLAAVPRAAVAIDCGHVDSLVRPCLSYVQGGPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH--NLNEDNARSIPPKCGVNLPYTISLNIDCSRV 113
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTP1_HELAN (Non-specific lipid-transfer protein AP10 OS=Helianthus annuus PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.528e-15 Identity = 37/112 (33.04%), Postives = 61/112 (54.46%), Query Frame = 2 Query: 53 GCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 388 G ++ + +M V +TC V +L+PC+ Y+ GG T CC G + L A R+ ADR+T C C K A + + + +A+ LPGKCG++ I+P+ +C+ + Sbjct: 7 GVAILAMIVMAQLMVHPSVAITCNDVTGNLTPCLPYLRSGGKPTPACCAGAKKLLGATRTQADRRTACKCAKTAAPQL---KVRPDMASSLPGKCGISTSIPINPNVNCNTI 115
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTP_ELECO (Non-specific lipid-transfer protein OS=Eleusine coracana PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 4.446e-15 Identity = 42/94 (44.68%), Postives = 60/94 (63.83%), Query Frame = 2 Query: 113 VTCRTVVNDLSPCISYVSYGGAV-TTNCCNGVRTLYNAARSTADRQTVCTC-LKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 388 ++C V + + PC++Y GA + +C +GVR+L AAR+TADR+ C C LK A S +S G A+ +PG+CG+ +PY IS S DCSRV Sbjct: 2 ISCGQVSSAIGPCLAYARGAGAAPSASCQSGVRSLNAAARTTADRRAACNCSLKSAASRVS--GLNAGKASSIPGRCGVRLPYAISASIDCSRV 93
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTP7_ARATH (Non-specific lipid-transfer protein 7 OS=Arabidopsis thaliana GN=LTP7 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.764e-14 Identity = 46/120 (38.33%), Postives = 67/120 (55.83%), Query Frame = 2 Query: 35 LMKLVTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTN--CCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPY--QISPSTDCS 382 LMKL GC LV V ++ + ++ KA ++C V ++L PC Y++ GG + CCNGVR L +T DR+ C C+K A + AAG+P +CG+ IPY QI +T C+ Sbjct: 4 LMKL--GC-LVFVFVIAAGPITAKAALSCGEVNSNLKPCTGYLTNGGITSPGPQCCNGVRKLNGMVLTTLDRRQACRCIKNAARNVG-PGLNADRAAGIPRRCGIKIPYSTQIRFNTKCN 119 The following BLAST results are available for this feature:
BLAST of FC921640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921640 ID=FC921640; Name=FC921640; organism=Citrus clementina; type=EST; length=620bpback to top |