FC921640
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTP_AMACA (Non-specific lipid-transfer protein OS=Amaranthus caudatus PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.420e-14 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 2 Query: 113 VTCRTVVNDLSPCISYVSYGGAVT--TNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 391 VTC V L PC++Y+ GA NCC GVR+L AA++ ADR+ C C+K A Y+ +AA L +CG+ + Y +SP+ +C+ VQ Sbjct: 2 VTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYK--VAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTP1_AMAHP (Non-specific lipid-transfer protein 1 OS=Amaranthus hypochondriacus PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 6.420e-14 Identity = 38/95 (40.00%), Postives = 55/95 (57.89%), Query Frame = 2 Query: 113 VTCRTVVNDLSPCISYVSYGGAVT--TNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRVQ 391 VTC V L PC++Y+ GA NCC GVR+L AA++ ADR+ C C+K A Y+ +AA L +CG+ + Y +SP+ +C+ VQ Sbjct: 2 VTCTVVTKALGPCMTYLKGTGATPPPANCCAGVRSLKAAAQTVADRRMACNCMKSAAQKTKSLNYK--VAARLASQCGVRMSYSVSPNVNCNSVQ 94
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTP8_ARATH (Non-specific lipid-transfer protein 8 OS=Arabidopsis thaliana GN=LTP8 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.440e-13 Identity = 35/112 (31.25%), Postives = 65/112 (58.04%), Query Frame = 2 Query: 62 LVLVCLMGSAFVS--TKAQVTCRTVVNDLSPCISYVSYG-GAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 388 L ++ ++G F+ +++ ++C V+ DL PC+SY++ G G CC+GV++L A ++AD++ C C+K + ++ + LA L CG ++P SP+ DC+ V Sbjct: 7 LAIISVLGIFFIPRYSESAISCSVVLQDLQPCVSYLTSGSGNPPETCCDGVKSLAAATTTSADKKAACQCIKSVANSVT---VKPELAQALASNCGASLPVDASPTVDCTTV 115
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTP_PINTA (Non-specific lipid-transfer protein OS=Pinus taeda PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.211e-12 Identity = 44/119 (36.97%), Postives = 66/119 (55.46%), Query Frame = 2 Query: 47 VTGCILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVT--TNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKC---GLNIPYQISPSTDCSRV 388 V G ++ ++ + G+ V + ++C VV+ ++PC +Y+ G A T CC +R L + ++T DRQ VC CLK +LG AA LPG C LN+P ISP+ DCS+V Sbjct: 12 VVGLVVTMMNVWGA--VPVEGAISCNQVVSAMTPCATYL-IGNAATPAATCCPSIRGLDSQVKATPDRQAVCNCLKTQAKSYG---VKLGKAANLPGLCKVTDLNVP--ISPNVDCSKV 122
BLAST of FC921640 vs. ExPASy Swiss-Prot
Match: NLTPB_ARATH (Non-specific lipid-transfer protein 11 OS=Arabidopsis thaliana GN=LTP11 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.748e-11 Identity = 39/110 (35.45%), Postives = 55/110 (50.00%), Query Frame = 2 Query: 59 ILVLVCLMGSAFVSTKAQVTCRTVVNDLSPCISYVSYGGAVTTNCCNGVRTLYNAARSTADRQTVCTCLKQAVSGISYTRYQLGLAAGLPGKCGLNIPYQISPSTDCSRV 388 +LV+ L+G A+ + C V L+ C+ Y+ GG + CCNG+ +L AA ADRQ C CLK + I A LP KCG+NI S + DC+ + Sbjct: 13 LLVITILLGIAYHGEA--IACPQVNMYLAQCLPYLKAGGNPSPMCCNGLNSLKAAAPEKADRQVACNCLKSVANTIPGINDD--FAKQLPAKCGVNIGVPFSKTVDCNSI 118 The following BLAST results are available for this feature:
BLAST of FC921640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921640 ID=FC921640; Name=FC921640; organism=Citrus clementina; type=EST; length=620bpback to top |