FC921660

Overview
NameFC921660
Unique NameFC921660
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length594
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: STP10_ARATH (Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.058e-43
Identity = 67/139 (48.20%), Postives = 99/139 (71.22%), Query Frame = 1
Query:  121 EEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFG 537
            EE +++L+KIRG   V+ E+QD++DA E A  +++P++NI+E + RP L+    +P FQ +TGIN I+FYAPVLF+++GF  DA+L S+ +TG V   ST +SI  VD+ GRR L + GGIQM  CQ++V   +G +FG
Sbjct:  237 EEAKQMLKKIRGADNVDHEFQDLIDAVEAAKKVENPWKNIMESKYRPALIFCSAIPFFQQITGINVIMFYAPVLFKTLGFGDDAALMSAVITGVVNMLSTFVSIYAVDRYGRRLLFLEGGIQMFICQLLVGSFIGARFG 375          

HSP 2 Score: 50.8322 bits (120), Expect = 2.058e-43
Identity = 21/34 (61.76%), Postives = 29/34 (85.29%), Query Frame = 3
Query:   12 GCRLSLGLAAAPALMMTVGGILLPETPNSLIERG 113
            G R+SLGLAA PA++M +G  +LP+TPNS++ERG
Sbjct:  201 GWRVSLGLAAVPAVVMVIGSFILPDTPNSMLERG 234          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: STP6_ARATH (Sugar transport protein 6 OS=Arabidopsis thaliana GN=STP6 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 9.513e-37
Identity = 60/139 (43.17%), Postives = 95/139 (68.35%), Query Frame = 1
Query:  121 EEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFG 537
            EEG+  L KIRG  ++N EY+ +V A ++A+ +K P+R +L+  +RP  ++ + + +FQ  TGIN+I+FYAPVLFQ++GF  DA+L S+ +TG++   +T + I  VD+ GRR LL+   + M+ CQ+I+ IIL    G
Sbjct:  232 EEGKEALRKIRGVDDINDEYESIVHACDIASQVKDPYRKLLKPASRPPFIIGMLLQLFQQFTGINAIMFYAPVLFQTVGFGSDAALLSAVITGSINVLATFVGIYLVDRTGRRFLLLQSSVHMLICQLIIGIILAKDLG 370          

HSP 2 Score: 38.5058 bits (88), Expect = 9.513e-37
Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 3
Query:    9 WGCRLSLGLAAAPALMMTVGGILLPETPNSLIERG-NIGGRE 131
            +G R++LG A  PA+++  G +L+ ETP SLIER  N  G+E
Sbjct:  195 YGWRIALGGAGIPAVILLFGSLLIIETPTSLIERNKNEEGKE 236          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: STP1_ARATH (Sugar transport protein 1 OS=Arabidopsis thaliana GN=STP1 PE=1 SV=2)

HSP 1 Score: 150.599 bits (379), Expect = 5.546e-36
Identity = 72/139 (51.80%), Postives = 101/139 (72.66%), Query Frame = 1
Query:  121 EEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFG 537
            EE +  L +IRG  +V+ E+ D+V AS+ + SI+HP+RN+L R+ RP L MA+ +P FQ LTGIN I+FYAPVLF ++GF  DASL S+ +TG+V  ++TL+SI  VD+ GRR L + GG QM+ CQ +V+  +G KFG
Sbjct:  236 EEAKTKLRRIRGVDDVSQEFDDLVAASKESQSIEHPWRNLLRRKYRPHLTMAVMIPFFQQLTGINVIMFYAPVLFNTIGFTTDASLMSAVVTGSVNVAATLVSIYGVDRWGRRFLFLEGGTQMLICQAVVAACIGAKFG 374          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: HUP3_CHLKE (H(+)/hexose cotransporter 3 OS=Chlorella kessleri GN=HUP3 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 6.050e-36
Identity = 64/146 (43.84%), Postives = 93/146 (63.70%), Query Frame = 1
Query:  106 KEGI*EEGRRVLEKIRGTKEVNAEYQDMVDASELANSI--KHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFG 537
            ++G  ++GRR+LEK+RGT  V AE+ D+V A E+A  I  +  +R++  RR  PQL+ +  +  FQ  TGIN+I+FY PVLF S+G    A+L ++ + GAV   ST+I++   DK GRR LLI GGI      +   I LG++FG
Sbjct:  233 EKGRTDQGRRILEKLRGTSHVEAEFADIVAAVEIARPITMRQSWRSLFTRRYMPQLLTSFVIQFFQQFTGINAIIFYVPVLFSSLGSASSAALLNTVVVGAVNVGSTMIAVLLSDKFGRRFLLIEGGITCCLAMLAAGITLGVEFG 378          

HSP 2 Score: 47.7506 bits (112), Expect = 6.050e-36
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 3
Query:   12 GCRLSLGLAAAPALMMTVGGILLPETPNSLIERG 113
            G RLSLGLAA P L++ +G I+LPE+PN L+E+G
Sbjct:  202 GWRLSLGLAAVPGLILLLGAIVLPESPNFLVEKG 235          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: STP3_ARATH (Sugar transport protein 3 OS=Arabidopsis thaliana GN=STP3 PE=2 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 7.048e-34
Identity = 57/129 (44.19%), Postives = 92/129 (71.32%), Query Frame = 1
Query:  136 VLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIIL 522
            +L ++RGT +V  E  D+V+AS  +++  + F  +L+R+ RP+LVMA+ +P FQ +TGIN + FYAPVL++++GF    SL S+ +TG V  SSTL+S+  VD++GR+ L + GG+QM+  QV + +I+
Sbjct:  246 MLRRVRGTNDVQDELTDLVEASSGSDTDSNAFLKLLQRKYRPELVMALVIPFFQQVTGINVVAFYAPVLYRTVGFGESGSLMSTLVTGIVGTSSTLLSMLVVDRIGRKTLFLIGGLQMLVSQVTIGVIV 374          

HSP 2 Score: 41.9726 bits (97), Expect = 7.048e-34
Identity = 18/32 (56.25%), Postives = 25/32 (78.12%), Query Frame = 3
Query:   12 GCRLSLGLAAAPALMMTVGGILLPETPNSLIE 107
            G R+SL  AA PA ++T+G + LPETPNS+I+
Sbjct:  204 GWRISLATAAIPASILTLGSLFLPETPNSIIQ 235          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: HUP2_CHLKE (H(+)/hexose cotransporter 2 OS=Chlorella kessleri GN=HUP2 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 2.639e-33
Identity = 57/144 (39.58%), Postives = 91/144 (63.19%), Query Frame = 1
Query:  127 GRRVLEKIRGTKEVNAEYQDMVDASELAN--SIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGL---KFGPN 543
            GR VL ++R T+ V+ E++D+  A+E +   +++  +  +  R+  P L++   + M Q LTGIN+I+FY PVLF S G    A+L ++ + GAV  ++T +SI +VDK GRR L + GGIQM   QV+ + +LG+   K+G N
Sbjct:  243 GRAVLARLRRTEAVDTEFEDICAAAEESTRYTLRQSWAALFSRQYSPMLIVTSLIAMLQQLTGINAIMFYVPVLFSSFGTARHAALLNTVIIGAVNVAATFVSIFSVDKFGRRGLFLEGGIQMFIGQVVTAAVLGVELNKYGTN 386          

HSP 2 Score: 53.9138 bits (128), Expect = 2.639e-33
Identity = 24/35 (68.57%), Postives = 30/35 (85.71%), Query Frame = 3
Query:   12 GCRLSLGLAAAPALMMTVGGILLPETPNSLIERGN 116
            G RLSLGLA  PA+++ +G +LLPETPNSLIERG+
Sbjct:  205 GWRLSLGLAGVPAIILLIGSLLLPETPNSLIERGH 239          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: STP2_ARATH (Sugar transport protein 2 OS=Arabidopsis thaliana GN=STP2 PE=1 SV=3)

HSP 1 Score: 115.546 bits (288), Expect = 8.190e-32
Identity = 59/135 (43.70%), Postives = 88/135 (65.19%), Query Frame = 1
Query:  121 EEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILER-RNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIIL 522
            E+G++VL KIRG +++  E+ ++  A+E+A  +K PF+ +  +  NRP LV    +  FQ  TGIN ++FYAPVLFQ+MG   +ASL S+ +T  V A +T+IS+  VD  GRR LL+ G +QM   Q+ +  IL
Sbjct:  233 EKGKQVLRKIRGIEDIELEFNEIKYATEVATKVKSPFKELFTKSENRPPLVCGTLLQFFQQFTGINVVMFYAPVLFQTMGSGDNASLISTVVTNGVNAIATVISLLVVDFAGRRCLLMEGALQMTATQMTIGGIL 367          

HSP 2 Score: 41.2022 bits (95), Expect = 8.190e-32
Identity = 20/34 (58.82%), Postives = 24/34 (70.59%), Query Frame = 3
Query:   12 GCRLSLGLAAAPALMMTVGGILLPETPNSLIERG 113
            G R SLG AA PAL++ +G   + ETP SLIERG
Sbjct:  197 GWRYSLGGAAVPALILLIGSFFIHETPASLIERG 230          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: STP8_ARATH (Sugar transport protein 8 OS=Arabidopsis thaliana GN=STP8 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.013e-29
Identity = 58/134 (43.28%), Postives = 92/134 (68.66%), Query Frame = 1
Query:  121 EEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIIL 522
            +EG+  L+KIRG ++V+ EY+ +V A ++A  +K P+  +++  +RP  V+ + +  FQ  TGIN+I+FYAPVLFQ++GF  DA+L S+ +TG +   ST + I  VDK GRR LL+   + M+ CQ+++ IIL
Sbjct:  233 KEGKETLKKIRGVEDVDEEYESIVHACDIARQVKDPYTKLMKPASRPPFVIGMLLQFFQQFTGINAIMFYAPVLFQTVGFGNDAALLSAVVTGTINVLSTFVGIFLVDKTGRRFLLLQSSVHMLICQLVIGIIL 366          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: STP5_ARATH (Sugar transport protein 5 OS=Arabidopsis thaliana GN=STP5 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.548e-29
Identity = 58/144 (40.28%), Postives = 88/144 (61.11%), Query Frame = 1
Query:  121 EEGRRVLEKIRGTK---EVNAEYQDMVDASELANSIKHPF--RNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFG 537
            +E    L K+RG +   +V  E  ++V +S+LA   +     + IL+RR RP LV+A+ +P FQ LTGI    FYAPVLF+S+GF    +L ++ + G V   S L+S   +D+ GRR L I+GGI M+ CQ+ V+++L +  G
Sbjct:  234 DEAHTSLLKLRGVENIADVETELAELVRSSQLAIEARAELFMKTILQRRYRPHLVVAVVIPCFQQLTGITVNAFYAPVLFRSVGFGSGPALIATFILGFVNLGSLLLSTMVIDRFGRRFLFIAGGILMLLCQIAVAVLLAVTVG 377          

HSP 2 Score: 44.2838 bits (103), Expect = 3.548e-29
Identity = 20/34 (58.82%), Postives = 27/34 (79.41%), Query Frame = 3
Query:   12 GCRLSLGLAAAPALMMTVGGILLPETPNSLIERG 113
            G R+SLGLAA PA +MTVG + + +TP+SL+ RG
Sbjct:  198 GWRISLGLAAVPAAIMTVGCLFISDTPSSLLARG 231          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: HUP1_CHLKE (H(+)/hexose cotransporter 1 OS=Chlorella kessleri GN=HUP1 PE=2 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 5.203e-26
Identity = 62/145 (42.76%), Postives = 92/145 (63.45%), Query Frame = 1
Query:  106 KEGI*EEGRRVLEKIRGTKEVNAEYQDMVDASELANSI--KHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKF 534
            ++G  E+GR VL+K+ GT EV+AE+ D+V A E+A  I  +  + ++  RR  PQL+ +  +  FQ  TGIN+I+FY PVLF S+G    A+L ++ + GAV   STLI++   DK GRR LLI GGIQ     +   ++L ++F
Sbjct:  233 EKGKTEKGREVLQKLCGTSEVDAEFADIVAAVEIARPITMRQSWASLFTRRYMPQLLTSFVIQFFQQFTGINAIIFYVPVLFSSLGSANSAALLNTVVVGAVNVGSTLIAVMFSDKFGRRFLLIEGGIQCCLAMLTTGVVLAIEF 377          
The following BLAST results are available for this feature:
BLAST of FC921660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
STP10_ARATH2.058e-4348.20Sugar transport protein 10 OS=Arabidopsis thaliana... [more]
STP6_ARATH9.513e-3743.17Sugar transport protein 6 OS=Arabidopsis thaliana ... [more]
STP1_ARATH5.546e-3651.80Sugar transport protein 1 OS=Arabidopsis thaliana ... [more]
HUP3_CHLKE6.050e-3643.84H(+)/hexose cotransporter 3 OS=Chlorella kessleri ... [more]
STP3_ARATH7.048e-3444.19Sugar transport protein 3 OS=Arabidopsis thaliana ... [more]
HUP2_CHLKE2.639e-3339.58H(+)/hexose cotransporter 2 OS=Chlorella kessleri ... [more]
STP2_ARATH8.190e-3243.70Sugar transport protein 2 OS=Arabidopsis thaliana ... [more]
STP8_ARATH1.013e-2943.28Sugar transport protein 8 OS=Arabidopsis thaliana ... [more]
STP5_ARATH3.548e-2940.28Sugar transport protein 5 OS=Arabidopsis thaliana ... [more]
HUP1_CHLKE5.203e-2642.76H(+)/hexose cotransporter 1 OS=Chlorella kessleri ... [more]

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Properties
Property NameValue
Genbank descriptionC32107H03EF RVDevelopN Citrus clementina cDNA clone C32107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921660 ID=FC921660; Name=FC921660; organism=Citrus clementina; type=EST; length=594bp
TCGAGACGTGGGGATGCAGGCTCTCACTTGGTCTAGCAGCGGCACCGGCT
TTAATGATGACTGTGGGAGGAATACTTCTCCCTGAAACACCTAACAGCTT
AATCGAAAGAGGGAATATAGGAGGAAGGGAGAAGAGTCCTAGAGAAAATC
AGAGGAACCAAAGAGGTCAATGCGGAGTATCAAGACATGGTAGATGCAAG
TGAATTGGCTAACTCCATAAAGCACCCGTTTAGAAACATTCTTGAGAGAA
GGAACAGGCCGCAATTGGTTATGGCAATATTCATGCCGATGTTTCAGATC
CTCACAGGCATCAATTCCATTCTCTTCTATGCTCCAGTTTTGTTCCAGTC
TATGGGATTTAAGGGAGATGCTTCACTCTATTCCTCTGCTATGACTGGAG
CAGTTCTTGCATCTTCTACACTCATTTCTATTGCGACTGTTGATAAACTT
GGTCGAAGAGCTTTACTCATAAGTGGGGGAATACAAATGATCACATGCCA
GGTCATAGTGTCCATAATCCTGGGGCTCAAGTTTGGACCCAACCAAGAAC
TATCATAATCCTTCTCAATACTGGTGGTGGTGGTGATTTGCCTA
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