FC921660

Overview
NameFC921660
Unique NameFC921660
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length594
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: YWTG_BACSU (Putative metabolite transport protein ywtG OS=Bacillus subtilis GN=ywtG PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.172e-19
Identity = 38/132 (28.79%), Postives = 75/132 (56.82%), Query Frame = 1
Query:  124 EGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSII 519
            + +++LEK+RGTK+++ E  D+ +A +         + + +   RP L+  + +   Q   G N+I++YAP  F ++GF   AS+  +   G V    TL++I  +DK+GR+ LL+ G   M+   ++++++
Sbjct:  197 KAKKILEKLRGTKDIDQEIHDIKEAEKQDEG---GLKELFDPWVRPALIAGLGLAFLQQFIGTNTIIYYAPKTFTNVGFGNSASILGTVGIGTVNVLMTLVAIKIIDKIGRKPLLLFGNAGMVISLIVLALV 325          

HSP 2 Score: 34.2686 bits (77), Expect = 3.172e-19
Identity = 16/37 (43.24%), Postives = 23/37 (62.16%), Query Frame = 3
Query:    3 ETWGCRLSLGLAAAPALMMTVGGILLPETPNSLIERG 113
            E W  R  LGLAA P+L++ +G + +PE+P  L   G
Sbjct:  159 EAW--RWMLGLAAVPSLLLLIGILFMPESPRWLFTNG 193          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: XYLT_LACBR (D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 7.861e-17
Identity = 42/143 (29.37%), Postives = 76/143 (53.15%), Query Frame = 1
Query:  106 KEGI*EEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKF 534
            K G  +E R VL+ +    +V A  +++ D  E A  +   +  +  +  RP L++ I + +FQ + G N++L+YAP +F  +GF   A+L +    G      T I++A +DK+ R+ ++  G + M     ++SI  G+KF
Sbjct:  192 KSGHLDEARHVLDTMNKHDQV-AVNKEINDIQESAKIVSGGWSELFGKMVRPSLIIGIGLAIFQQVMGCNTVLYYAPTIFTDVGFGVSAALLAHIGIGIFNVIVTAIAVAIMDKIDRKKIVNIGAVGMGISLFVMSI--GMKF 331          

HSP 2 Score: 39.2762 bits (90), Expect = 7.861e-17
Identity = 16/36 (44.44%), Postives = 26/36 (72.22%), Query Frame = 3
Query:   12 GCRLSLGLAAAPALMMTVGGILLPETPNSLIERGNI 119
            G R  LG AA PA ++ +GG++LPE+P  L++ G++
Sbjct:  161 GWRWMLGFAAIPAALLFLGGLILPESPRFLVKSGHL 196          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: CSBC_BACSU (Probable metabolite transport protein csbC OS=Bacillus subtilis GN=csbC PE=1 SV=3)

HSP 1 Score: 58.5362 bits (140), Expect = 2.032e-13
Identity = 36/140 (25.71%), Postives = 67/140 (47.86%), Query Frame = 1
Query:  106 KEGI*EEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHPFRNILERR-NRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIIL 522
            K G  EE RR++      K++  E  +M          K     +L+ +  RP L++ + + +FQ   GIN++++YAP +F   G    AS   +   G +     + ++  +D++GR+ LLI G + +      +S +L
Sbjct:  192 KRGSEEEARRIMNITHDPKDIEMELAEMKQGEA---EKKETTLGVLKAKWIRPMLLIGVGLAIFQQAVGINTVIYYAPTIFTKAGLGTSASALGTMGIGILNVIMCITAMILIDRVGRKKLLIWGSVGITLSLAALSGVL 328          

HSP 2 Score: 36.1946 bits (82), Expect = 2.032e-13
Identity = 16/38 (42.11%), Postives = 26/38 (68.42%), Query Frame = 3
Query:    3 ETWGCRLSLGLAAAPALMMTVGGILLPETPNSLIERGN 116
            E W  R  +GLAA PA+++ +G   +PE+P  L++RG+
Sbjct:  160 EAW--RWMVGLAAVPAVLLLIGIAFMPESPRWLVKRGS 195          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter iolT OS=Bacillus subtilis GN=iolT PE=2 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 3.426e-13
Identity = 37/133 (27.82%), Postives = 75/133 (56.39%), Query Frame = 1
Query:  121 EEGRRVLEKIRGTKEVNAEYQDMVDASELANSI-KHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSI 516
            E+  RVL+KIR  K   AE Q++  A +  + + K  F+++     R  + + + + + Q +TG+NSI++Y   + ++ GF+ +A+L  +   G +   +T + I  + ++GRR +L++G I   T  +++ I
Sbjct:  208 EDALRVLKKIRDEKRAAAELQEIEFAFKKEDQLEKATFKDLSVPWVRRIVFIGLGIAIVQQITGVNSIMYYGTEILRNSGFQTEAALIGNIANGVISVLATFVGIWLLGRVGRRPMLMTGLIGTTTALLLIGI 340          

HSP 2 Score: 29.261 bits (64), Expect = 3.426e-13
Identity = 13/32 (40.62%), Postives = 20/32 (62.50%), Query Frame = 3
Query:   18 RLSLGLAAAPALMMTVGGILLPETPNSLIERG 113
            R  L +A+ PAL +  G I +PE+P  L+ +G
Sbjct:  174 RFMLVIASLPALFLFFGMIRMPESPRWLVSKG 205          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: MYCT_MOUSE (Proton myo-inositol cotransporter OS=Mus musculus GN=Slc2a13 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 4.419e-13
Identity = 40/149 (26.85%), Postives = 76/149 (51.01%), Query Frame = 1
Query:  106 KEGI*EEGRRVLEKIRGTKEVNAEYQDM---VDASELANSIKHPF--RNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGD-ASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKF 534
            ++G  ++ RR+L ++RG + ++ EY  +   ++  E   +   P   R +     R  LV+   + MFQ L+GIN+I++Y+  + Q  G + D  +++ +++T       TL+ +  V+K+GRR L        +    +  IIL L F
Sbjct:  238 QKGQTQKARRILSQMRGNQTIDEEYDSIRNSIEEEEKEATAAGPIICRMLSYPPTRRALVVGCGLQMFQQLSGINTIMYYSATILQMSGVEDDRLAIWLASITAFTNFIFTLVGVWLVEKVGRRKLTFGS----LAGTTVALIILALGF 382          

HSP 2 Score: 36.965 bits (84), Expect = 4.419e-13
Identity = 17/34 (50.00%), Postives = 24/34 (70.59%), Query Frame = 3
Query:   12 GCRLSLGLAAAPALMMTVGGILLPETPNSLIERG 113
            G R  LGLAA PA++  +G + LPE+P  LI++G
Sbjct:  207 GWRYMLGLAAIPAVIQFLGFLFLPESPRWLIQKG 240          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: MYCT_RAT (Proton myo-inositol cotransporter OS=Rattus norvegicus GN=Slc2a13 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.257e-12
Identity = 35/126 (27.78%), Postives = 68/126 (53.97%), Query Frame = 1
Query:  106 KEGI*EEGRRVLEKIRGTKEVNAEYQDM---VDASELANSIKHPF--RNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGD-ASLYSSAMTGAVLASSTLISIATVDKLGRRAL 465
            ++G  ++ RR+L ++RG + ++ EY  +   ++  E   S   P   R +     R  L +   + MFQ L+GIN+I++Y+  + Q  G + D  +++ +++T       TL+ +  V+K+GRR L
Sbjct:  238 QKGQTQKARRILSQMRGNQTIDEEYDSIRNSIEEEEKEASAAGPIICRMLSYPPTRRALAVGCGLQMFQQLSGINTIMYYSATILQMSGVEDDRLAIWLASITAFTNFIFTLVGVWLVEKVGRRKL 363          

HSP 2 Score: 36.965 bits (84), Expect = 1.257e-12
Identity = 17/34 (50.00%), Postives = 24/34 (70.59%), Query Frame = 3
Query:   12 GCRLSLGLAAAPALMMTVGGILLPETPNSLIERG 113
            G R  LGLAA PA++  +G + LPE+P  LI++G
Sbjct:  207 GWRYMLGLAAIPAVIQFLGFLFLPESPRWLIQKG 240          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: GLCP_SYNY3 (Glucose transport protein OS=Synechocystis sp. (strain PCC 6803) GN=gtr PE=3 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 1.266e-12
Identity = 44/143 (30.77%), Postives = 76/143 (53.15%), Query Frame = 1
Query:  109 EGI*EEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKHP--FRNILERRNR--PQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILG 525
            +G  E+   +L K+ G      +    ++  +   S+ H   F ++L RR    P + + + +   Q   GIN I +Y+ VL++S+GF  + SL  + +TG +   +TL++IA VDK GR+ LL+ G I M     I+S++ G
Sbjct:  216 QGQGEKAAAILWKVEG-----GDVPSRIEEIQATVSLDHKPRFSDLLSRRGGLLPIVWIGMGLSALQQFVGINVIFYYSSVLWRSVGFTEEKSLLITVITGFINILTTLVAIAFVDKFGRKPLLLMGSIGMTITLGILSVVFG 353          

HSP 2 Score: 24.6386 bits (52), Expect = 1.266e-12
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 3
Query:   45 PALMMTVGGILLPETPNSLIERG 113
            PAL+  V   L+PE+P  L+ +G
Sbjct:  195 PALLYGVCAFLIPESPRYLVAQG 217          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: MYCT_HUMAN (Proton myo-inositol cotransporter OS=Homo sapiens GN=SLC2A13 PE=1 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 1.631e-12
Identity = 38/149 (25.50%), Postives = 76/149 (51.01%), Query Frame = 1
Query:  106 KEGI*EEGRRVLEKIRGTKEVNAEYQDMV-----DASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGD-ASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKF 534
            ++G  ++ RR+L ++RG + ++ EY  +      +  E+ ++     R +     R  L++   + MFQ L+GIN+I++Y+  + Q  G + D  +++ +++T       TL+ +  V+K+GRR L        +    +  IIL L F
Sbjct:  249 QKGQTQKARRILSQMRGNQTIDEEYDSIKNNIEEEEKEVGSAGPVICRMLSYPPTRRALIVGCGLQMFQQLSGINTIMYYSATILQMSGVEDDRLAIWLASVTAFTNFIFTLVGVWLVEKVGRRKLTFGS----LAGTTVALIILALGF 393          

HSP 2 Score: 36.5798 bits (83), Expect = 1.631e-12
Identity = 17/34 (50.00%), Postives = 23/34 (67.65%), Query Frame = 3
Query:   12 GCRLSLGLAAAPALMMTVGGILLPETPNSLIERG 113
            G R  LGLAA PA++   G + LPE+P  LI++G
Sbjct:  218 GWRYMLGLAAVPAVIQFFGFLFLPESPRWLIQKG 251          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: HXT10_YEAST (Hexose transporter HXT10 OS=Saccharomyces cerevisiae GN=HXT10 PE=1 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.638e-12
Identity = 41/145 (28.28%), Postives = 70/145 (48.28%), Query Frame = 1
Query:  106 KEGI*EEGRRVLEKIRGTKEVNA----EYQDMVDASELANSIKHP-FRNILERRNR--PQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSII 519
            ++G  EE RR L K       +     E+  +V   EL  ++ +  +  +   +    P+++M I +   Q LTG N   +Y   +F ++G +   S  +S + GAV  +ST +++  VDK GRR  L+ G   M  C VI + +
Sbjct:  249 EKGKYEEARRSLAKSNKVTVTDPGVVFEFDTIVANMELERAVGNASWHELFSNKGAILPRVIMGIVIQSLQQLTGCNYFFYYGTTIFNAVGMQD--SFETSIVLGAVNFASTFVALYIVDKFGRRKCLLWGSASMAICFVIFATV 391          

HSP 2 Score: 34.6538 bits (78), Expect = 1.638e-12
Identity = 14/32 (43.75%), Postives = 23/32 (71.88%), Query Frame = 3
Query:   18 RLSLGLAAAPALMMTVGGILLPETPNSLIERG 113
            R+ LGL  A A+ M +G +++PE+P  L+E+G
Sbjct:  220 RVPLGLCFAWAIFMVIGMVMVPESPRYLVEKG 251          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: GTR1_DROME (Glucose transporter type 1 OS=Drosophila melanogaster GN=Glut1 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.747e-12
Identity = 39/139 (28.06%), Postives = 70/139 (50.36%), Query Frame = 1
Query:  121 EEGRRVLEKIRGTKEVNAEYQDMVDASELANSIKH--PFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLK 531
            EE R+ L ++R +  V  + ++M        S  H      I     RP L++ I M + Q  +GIN++ +Y+  LF S G   +++ +++   GA++   TL+SI  +D+ GRR L + G   M    + ++I   +K
Sbjct:  468 EEARKALRRLRASGSVEEDIEEMRAEERAQQSESHISTMELICSPTLRPPLIIGIVMQLSQQFSGINAVFYYSTSLFMSSGLTEESAKFATIGIGAIMVVMTLVSIPLMDRTGRRTLHLYGLGGMFIFSIFITISFLIK 606          

HSP 2 Score: 23.483 bits (49), Expect = 2.747e-12
Identity = 11/31 (35.48%), Postives = 18/31 (58.06%), Query Frame = 3
Query:   12 GCRLSLGLAAAPALMMTVGGILLPETPNSLI 104
            G  + LGLA  PA++  +   + PE+P  L+
Sbjct:  431 GWPILLGLAICPAILQLILLPVCPESPRYLL 461          
The following BLAST results are available for this feature:
BLAST of FC921660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
YWTG_BACSU3.172e-1928.79Putative metabolite transport protein ywtG OS=Baci... [more]
XYLT_LACBR7.861e-1729.37D-xylose-proton symporter OS=Lactobacillus brevis ... [more]
CSBC_BACSU2.032e-1325.71Probable metabolite transport protein csbC OS=Baci... [more]
IOLT_BACSU3.426e-1327.82Major myo-inositol transporter iolT OS=Bacillus su... [more]
MYCT_MOUSE4.419e-1326.85Proton myo-inositol cotransporter OS=Mus musculus ... [more]
MYCT_RAT1.257e-1227.78Proton myo-inositol cotransporter OS=Rattus norveg... [more]
GLCP_SYNY31.266e-1230.77Glucose transport protein OS=Synechocystis sp. (st... [more]
MYCT_HUMAN1.631e-1225.50Proton myo-inositol cotransporter OS=Homo sapiens ... [more]
HXT10_YEAST1.638e-1228.28Hexose transporter HXT10 OS=Saccharomyces cerevisi... [more]
GTR1_DROME2.747e-1228.06Glucose transporter type 1 OS=Drosophila melanogas... [more]

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Properties
Property NameValue
Genbank descriptionC32107H03EF RVDevelopN Citrus clementina cDNA clone C32107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921660 ID=FC921660; Name=FC921660; organism=Citrus clementina; type=EST; length=594bp
TCGAGACGTGGGGATGCAGGCTCTCACTTGGTCTAGCAGCGGCACCGGCT
TTAATGATGACTGTGGGAGGAATACTTCTCCCTGAAACACCTAACAGCTT
AATCGAAAGAGGGAATATAGGAGGAAGGGAGAAGAGTCCTAGAGAAAATC
AGAGGAACCAAAGAGGTCAATGCGGAGTATCAAGACATGGTAGATGCAAG
TGAATTGGCTAACTCCATAAAGCACCCGTTTAGAAACATTCTTGAGAGAA
GGAACAGGCCGCAATTGGTTATGGCAATATTCATGCCGATGTTTCAGATC
CTCACAGGCATCAATTCCATTCTCTTCTATGCTCCAGTTTTGTTCCAGTC
TATGGGATTTAAGGGAGATGCTTCACTCTATTCCTCTGCTATGACTGGAG
CAGTTCTTGCATCTTCTACACTCATTTCTATTGCGACTGTTGATAAACTT
GGTCGAAGAGCTTTACTCATAAGTGGGGGAATACAAATGATCACATGCCA
GGTCATAGTGTCCATAATCCTGGGGCTCAAGTTTGGACCCAACCAAGAAC
TATCATAATCCTTCTCAATACTGGTGGTGGTGGTGATTTGCCTA
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