FC921660

Overview
NameFC921660
Unique NameFC921660
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length594
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: KHT2_KLULA (Hexose transporter 2 OS=Kluyveromyces lactis GN=KHT2 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 2.758e-12
Identity = 40/112 (35.71%), Postives = 57/112 (50.89%), Query Frame = 1
Query:  190 VDASELANS--IKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSII 519
            V+A  LA S  IK  F    +   R  L+M + +  FQ LTG N   +Y   +F S+G   D S  +S + G V  +ST ++I  VDK GRR  L+ G   M  C V+ + +
Sbjct:  297 VEAERLAGSASIKELFSTKTKVFQR--LIMGMLIQSFQQLTGNNYFFYYGTTIFNSVGM--DDSFETSIVLGIVNFASTFVAIYVVDKFGRRKCLLWGAAAMTACMVVFASV 404          

HSP 2 Score: 31.9574 bits (71), Expect = 2.758e-12
Identity = 15/40 (37.50%), Postives = 24/40 (60.00%), Query Frame = 3
Query:   18 RLSLGLAAAPALMMTVGGILLPETPNSLIERGNIGGREKS 137
            R+ LGL  A A+ M  G + +PE+P  L+E+  I   ++S
Sbjct:  233 RVPLGLCFAWAIFMITGMLFVPESPRFLVEKDRIDEAKRS 272          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: GTR1_CHICK (Solute carrier family 2, facilitated glucose transporter member 1 OS=Gallus gallus GN=SLC2A1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 4.668e-12
Identity = 41/140 (29.29%), Postives = 83/140 (59.29%), Query Frame = 1
Query:  124 EGRRVLEKIRGTKEVNAEYQDMVDAS-----ELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGL 528
            + + VL+K+RGT +V+++ Q+M + S     E   +I   FR+ + R+    +++AI + + Q L+GIN++ +Y+  +F+  G   +  +Y++  +G V  + T++S+  V++ GRR L + G   M  C ++++I L L
Sbjct:  222 KAKSVLKKLRGTTDVSSDLQEMKEESRQMMREKKVTIMELFRSPMYRQ---PILIAIVLQLSQQLSGINAVFYYSTSIFEKSGV--EQPVYATIGSGVVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALTL 356          

HSP 2 Score: 22.3274 bits (46), Expect = 4.668e-12
Identity = 13/39 (33.33%), Postives = 18/39 (46.15%), Query Frame = 3
Query:   21 LSLGLAAAPALMMTVGGILLPETPNSLIERGNIGGREKS 137
            L LG    PAL+  +     PE+P  L+   N   + KS
Sbjct:  187 LLLGFIFVPALLQCIILPFAPESPRFLLINRNEENKAKS 225          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: GTR2_MOUSE (Solute carrier family 2, facilitated glucose transporter member 2 OS=Mus musculus GN=Slc2a2 PE=1 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 6.050e-12
Identity = 38/135 (28.15%), Postives = 74/135 (54.81%), Query Frame = 1
Query:  130 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHP--FRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGL 528
            ++ L+++RGT++V  +  +M    E A++ +     +   +   R  +++A+ + M Q  +GIN I +Y+  +FQ+ G      +Y++   GA+    T +S+  V+K GRR L ++G I M  C + +S+ L L
Sbjct:  256 KKSLKRLRGTEDVTKDINEMKKEKEEASTEQKVSVIQLFTDANYRQPILVALMLHMAQQFSGINGIFYYSTSIFQTAGIS--QPVYATIGVGAINMIFTAVSVLLVEKAGRRTLFLTGMIGMFFCTIFMSVGLVL 388          

HSP 2 Score: 24.2534 bits (51), Expect = 6.050e-12
Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:   27 LGLAAAPALMMTVGGILLPETPNSL 101
            LGL+A PAL+  +  +  PE+P  L
Sbjct:  221 LGLSAVPALLQCLLLLFCPESPRYL 245          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: HXT5_YEAST (Probable glucose transporter HXT5 OS=Saccharomyces cerevisiae GN=HXT5 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 7.828e-12
Identity = 42/148 (28.38%), Postives = 69/148 (46.62%), Query Frame = 1
Query:  121 EEGRRVLEKIRGTKEVNA-------EYQDMVDASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLKFGPN 543
            EE +R L +   T E +         YQ  ++A  LA S         + +   + +M + +   Q LTG N   +Y   +FQ++G +   S  ++ + G V   ST  S+ TVD+ GRR  L+ G + MI C V+ + +   +  PN
Sbjct:  291 EEAKRSLARANKTTEDSPLVTLEMENYQSSIEAERLAGSASWGELVTGKPQMFRRTLMGMMIQSLQQLTGDNYFFYYGTTIFQAVGLED--SFETAIVLGVVNFVSTFFSLYTVDRFGRRNCLLWGCVGMICCYVVYASVGVTRLWPN 436          

HSP 2 Score: 31.5722 bits (70), Expect = 7.828e-12
Identity = 16/40 (40.00%), Postives = 24/40 (60.00%), Query Frame = 3
Query:   18 RLSLGLAAAPALMMTVGGILLPETPNSLIERGNIGGREKS 137
            R+ LGL  A ++ M VG   +PE+P  L+E G I   ++S
Sbjct:  257 RVPLGLCFAWSIFMIVGMTFVPESPRYLVEVGKIEEAKRS 296          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: GTR2_RAT (Solute carrier family 2, facilitated glucose transporter member 2 OS=Rattus norvegicus GN=Slc2a2 PE=2 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.324e-11
Identity = 38/135 (28.15%), Postives = 74/135 (54.81%), Query Frame = 1
Query:  130 RRVLEKIRGTKEVNAEYQDMVDASELANSIKHP--FRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGL 528
            ++ L+++RGT+++  +  +M    E A++ +     +   +   R  +V+A+ + + Q  +GIN I +Y+  +FQ+ G      +Y++   GA+    T +S+  V+K GRR L ++G I M  C V +S+ L L
Sbjct:  255 KKSLKRLRGTEDITKDINEMRKEKEEASTEQKVSVIQLFTDPNYRQPIVVALMLHLAQQFSGINGIFYYSTSIFQTAGIS--QPVYATIGVGAINMIFTAVSVLLVEKAGRRTLFLAGMIGMFFCAVFMSLGLVL 387          

HSP 2 Score: 24.2534 bits (51), Expect = 1.324e-11
Identity = 11/25 (44.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:   27 LGLAAAPALMMTVGGILLPETPNSL 101
            LGL+A PAL+  +  +  PE+P  L
Sbjct:  220 LGLSAVPALLQCLLLLFCPESPRYL 244          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: GTR3_CHICK (Solute carrier family 2, facilitated glucose transporter member 3 OS=Gallus gallus GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.326e-11
Identity = 39/139 (28.06%), Postives = 78/139 (56.12%), Query Frame = 1
Query:  121 EEGRRVLEKIRGTKEVNAEYQDMVDAS-ELANSIKHPFRNILERRN-RPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLK 531
            E+ + VL+K+RGT++V+ +  +M + S +++   K     +    N R  ++++I + + Q L+GIN++ +Y+  +F+  G      +Y++   G V    T++S+  V++ GRR L + G   M  C  +++I L LK
Sbjct:  221 EKAQTVLQKLRGTQDVSQDISEMKEESAKMSQEKKATVLELFRSPNYRQPIIISITLQLSQQLSGINAVFYYSTGIFERAGI--TQPVYATIGAGVVNTVFTVVSLFLVERAGRRTLHLVGLGGMAVCAAVMTIALALK 357          

HSP 2 Score: 23.483 bits (49), Expect = 1.326e-11
Identity = 10/28 (35.71%), Postives = 15/28 (53.57%), Query Frame = 3
Query:   21 LSLGLAAAPALMMTVGGILLPETPNSLI 104
            L LG    PA++  V  +  PE+P  L+
Sbjct:  187 LLLGFTIVPAVLQCVALLFCPESPRFLL 214          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: GTR3_CANFA (Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 6.344e-11
Identity = 40/142 (28.17%), Postives = 80/142 (56.34%), Query Frame = 1
Query:  121 EEGRRVLEKIRGTKEVNAEYQDMVD-----ASELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGLK 531
            E  + +L+++ GT++V+ + Q+M D     A E   ++   FR+   R  R  ++++I + + Q L+GIN++ +Y+  +F+  G   +  +Y++   G V    T++S+  V++ GRR L + G   M  C ++++I L LK
Sbjct:  220 ENAKEILQRLWGTQDVSQDIQEMKDESARMAQEKQVTVLELFRS---RSYRQPIIISIMLQLSQQLSGINAVFYYSTGIFKDAGV--EEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSILMTISLLLK 356          

HSP 2 Score: 20.4014 bits (41), Expect = 6.344e-11
Identity = 9/28 (32.14%), Postives = 14/28 (50.00%), Query Frame = 3
Query:   21 LSLGLAAAPALMMTVGGILLPETPNSLI 104
            L LG    PA++ +      PE+P  L+
Sbjct:  186 LLLGFTIIPAVLQSAALPFCPESPRFLL 213          
BLAST of FC921660 vs. ExPASy Swiss-Prot
Match: GTR1_HUMAN (Solute carrier family 2, facilitated glucose transporter member 1 OS=Homo sapiens GN=SLC2A1 PE=1 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 8.235e-11
Identity = 40/138 (28.99%), Postives = 79/138 (57.25%), Query Frame = 1
Query:  130 RRVLEKIRGTKEVNAEYQDMVDAS-----ELANSIKHPFRNILERRNRPQLVMAIFMPMFQILTGINSILFYAPVLFQSMGFKGDASLYSSAMTGAVLASSTLISIATVDKLGRRALLISGGIQMITCQVIVSIILGL 528
            + VL+K+RGT +V  + Q+M + S     E   +I   FR+   R+    +++A+ + + Q L+GIN++ +Y+  +F+  G +    +Y++  +G V  + T++S+  V++ GRR L + G   M  C ++++I L L
Sbjct:  225 KSVLKKLRGTADVTHDLQEMKEESRQMMREKKVTILELFRSPAYRQ---PILIAVVLQLSQQLSGINAVFYYSTSIFEKAGVQ--QPVYATIGSGIVNTAFTVVSLFVVERAGRRTLHLIGLAGMAGCAILMTIALAL 357          

HSP 2 Score: 21.9422 bits (45), Expect = 8.235e-11
Identity = 13/39 (33.33%), Postives = 18/39 (46.15%), Query Frame = 3
Query:   21 LSLGLAAAPALMMTVGGILLPETPNSLIERGNIGGREKS 137
            L L +   PAL+  +     PE+P  L+   N   R KS
Sbjct:  188 LLLSIIFIPALLQCIVLPFCPESPRFLLINRNEENRAKS 226          
The following BLAST results are available for this feature:
BLAST of FC921660 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
KHT2_KLULA2.758e-1235.71Hexose transporter 2 OS=Kluyveromyces lactis GN=KH... [more]
GTR1_CHICK4.668e-1229.29Solute carrier family 2, facilitated glucose trans... [more]
GTR2_MOUSE6.050e-1228.15Solute carrier family 2, facilitated glucose trans... [more]
HXT5_YEAST7.828e-1228.38Probable glucose transporter HXT5 OS=Saccharomyces... [more]
GTR2_RAT1.324e-1128.15Solute carrier family 2, facilitated glucose trans... [more]
GTR3_CHICK1.326e-1128.06Solute carrier family 2, facilitated glucose trans... [more]
GTR3_CANFA6.344e-1128.17Solute carrier family 2, facilitated glucose trans... [more]
GTR1_HUMAN8.235e-1128.99Solute carrier family 2, facilitated glucose trans... [more]

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Properties
Property NameValue
Genbank descriptionC32107H03EF RVDevelopN Citrus clementina cDNA clone C32107H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921660 ID=FC921660; Name=FC921660; organism=Citrus clementina; type=EST; length=594bp
TCGAGACGTGGGGATGCAGGCTCTCACTTGGTCTAGCAGCGGCACCGGCT
TTAATGATGACTGTGGGAGGAATACTTCTCCCTGAAACACCTAACAGCTT
AATCGAAAGAGGGAATATAGGAGGAAGGGAGAAGAGTCCTAGAGAAAATC
AGAGGAACCAAAGAGGTCAATGCGGAGTATCAAGACATGGTAGATGCAAG
TGAATTGGCTAACTCCATAAAGCACCCGTTTAGAAACATTCTTGAGAGAA
GGAACAGGCCGCAATTGGTTATGGCAATATTCATGCCGATGTTTCAGATC
CTCACAGGCATCAATTCCATTCTCTTCTATGCTCCAGTTTTGTTCCAGTC
TATGGGATTTAAGGGAGATGCTTCACTCTATTCCTCTGCTATGACTGGAG
CAGTTCTTGCATCTTCTACACTCATTTCTATTGCGACTGTTGATAAACTT
GGTCGAAGAGCTTTACTCATAAGTGGGGGAATACAAATGATCACATGCCA
GGTCATAGTGTCCATAATCCTGGGGCTCAAGTTTGGACCCAACCAAGAAC
TATCATAATCCTTCTCAATACTGGTGGTGGTGGTGATTTGCCTA
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