FC921674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI1_PONAB (Isopentenyl-diphosphate Delta-isomerase 1 OS=Pongo abelii GN=IDI1 PE=2 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 3.668e-39 Identity = 80/140 (57.14%), Postives = 97/140 (69.29%), Query Frame = 1 Query: 220 MGDATTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 M + TD +D Q +L+ E CIL+DEND +G E K NCHL E IE LLHRAFSVFLFN++ +LLLQQRS K+T P +TNTCCSHPL EL E +ALGVR AAQR+L ELGI +E+VP +E L RI Y+ Sbjct: 1 MPEINTDH-LDKQQVQLLAE-MCILIDENDNKIGAETKKNCHLNENIEK-GLLHRAFSVFLFNTENKLLLQQRSDAKITLPGCFTNTCCSHPLSNPGELEENDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYK 137 HSP 2 Score: 40.4318 bits (93), Expect = 3.668e-39 Identity = 15/30 (50.00%), Postives = 24/30 (80.00%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNPD 725 +A SDG WGEHE+DY+L ++V++ P+P+ Sbjct: 137 KAQSDGIWGEHEIDYILLVRKNVTLNPDPN 166
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI1_MOUSE (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mus musculus GN=Idi1 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 5.168e-38 Identity = 72/131 (54.96%), Postives = 94/131 (71.76%), Query Frame = 1 Query: 247 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 +D Q +L+ E CIL+DEND +G + K NCHL E I+ LLHRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E NA+GV+ AA+R+L ELGI +E+V ++E L RI Y+ Sbjct: 9 LDEKQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENNAIGVKRAAKRRLKAELGIPLEEVDLNEMDYLTRIYYK 137 HSP 2 Score: 41.9726 bits (97), Expect = 5.168e-38 Identity = 16/30 (53.33%), Postives = 25/30 (83.33%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNPD 725 +A SDG WGEHE+DY+LF ++V++ P+P+ Sbjct: 137 KAQSDGIWGEHEVDYILFLRKNVTLNPDPN 166
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI1_RAT (Isopentenyl-diphosphate Delta-isomerase 1 OS=Rattus norvegicus GN=Idi1 PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 5.168e-38 Identity = 71/133 (53.38%), Postives = 95/133 (71.43%), Query Frame = 1 Query: 241 AGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 + +D Q +L+ E CIL+DEND +G + K NCHL E I+ L+HRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E +A+GV+ AAQR+L ELGI +E+V ++E L RI Y+ Sbjct: 7 SNLDEKQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLIHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLNNPGELEENDAMGVKRAAQRRLKAELGIPLEEVDLNEMNYLTRIYYK 137 HSP 2 Score: 42.3578 bits (98), Expect = 5.168e-38 Identity = 16/30 (53.33%), Postives = 25/30 (83.33%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNPD 725 +A SDG WGEHE+DY+LF ++V++ P+P+ Sbjct: 137 KAQSDGIWGEHEIDYILFLRKNVTLNPDPN 166
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI1_MESAU (Isopentenyl-diphosphate Delta-isomerase 1 OS=Mesocricetus auratus GN=IDI1 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.143e-37 Identity = 72/131 (54.96%), Postives = 93/131 (70.99%), Query Frame = 1 Query: 247 MDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 +D Q +L+ E CIL+DEND +G + K NCHL E I+ LLHRAFSVFLFN++ +LLLQQRS K+TFP +TN+CCSHPL EL E +A+GV+ AAQR+L ELGI +E+V +E L RI Y+ Sbjct: 9 LDEQQVQLLAE-MCILIDENDNKIGADTKKNCHLNENIDK-GLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNSCCSHPLSNPGELEENDAIGVKRAAQRRLKAELGIPLEEVDPNEMHYLTRIYYK 137 HSP 2 Score: 42.743 bits (99), Expect = 1.143e-37 Identity = 16/30 (53.33%), Postives = 25/30 (83.33%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNPD 725 +A SDG WGEHE+DY+LF ++V++ P+P+ Sbjct: 137 KAQSDGIWGEHEIDYILFLKKNVTLNPDPN 166
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI1_PHARH (Isopentenyl-diphosphate Delta-isomerase OS=Phaffia rhodozyma GN=IDI PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.437e-34 Identity = 72/131 (54.96%), Postives = 86/131 (65.65%), Query Frame = 1 Query: 250 DAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIES-LNLLHRAFSVFLFN-SKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILY 636 D Q RLM E+ CILV+ +D G +K CHLM I + +LLHRAFSVFLF S LLLQ+R+ K+TFP +WTNTCCSHPL + E+ EEN +GVR AA RKL ELG+ P D FT L RI Y Sbjct: 23 DEEQVRLM-EERCILVNPDDVAYGEASKKTCHLMSNINAPKDLLHRAFSVFLFRPSDGALLLQRRADEKITFPGMWTNTCCSHPLSIKGEVKEENQIGVRRAASRKLEHELGVPTSSTPPDSFTYLTRIHY 152 HSP 2 Score: 40.4318 bits (93), Expect = 1.437e-34 Identity = 16/29 (55.17%), Postives = 20/29 (68.97%), Query Frame = 3 Query: 639 APSDGKWGEHELDYLLFTVRDVSVYPNPD 725 APSDG WGEHE+DY+LF+ NP+ Sbjct: 154 APSDGLWGEHEIDYILFSTTPTEHTGNPN 182
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI2_HUMAN (Isopentenyl-diphosphate Delta-isomerase 2 OS=Homo sapiens GN=IDI2 PE=1 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.193e-33 Identity = 69/127 (54.33%), Postives = 91/127 (71.65%), Query Frame = 1 Query: 235 TDAGMDAVQRRLM--FEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDE 609 +D +D V RR + E+ I+VDEND+V+G + K NCHL E IE LLHRAFSV LFN+K +L+QQRS TKVTFP +T++C SHPLY +EL E++A+GVR AAQR+L ELGI E + ++ Sbjct: 2 SDINLDWVDRRQLQRLEEMLIVVDENDKVIGADTKRNCHLNENIEK-GLLHRAFSVVLFNTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYNPAELEEKDAIGVRRAAQRRLQAELGIPGEQISPED 127 HSP 2 Score: 34.2686 bits (77), Expect = 1.193e-33 Identity = 14/29 (48.28%), Postives = 21/29 (72.41%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRDVSVYPNP 722 +A SD WGEHE+ YLL ++V++ P+P Sbjct: 137 KAKSDRIWGEHEICYLLLVRKNVTLNPDP 165
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI1_SCHPO (Isopentenyl-diphosphate Delta-isomerase OS=Schizosaccharomyces pombe GN=idi1 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.553e-33 Identity = 71/132 (53.79%), Postives = 87/132 (65.91%), Query Frame = 1 Query: 250 DAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESE---LIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILY 636 D Q RLM E+ CI+VDEND + + K CHLME I LLHRAFS+F+F+ + LLLQQR+ K+TFP +WTNTCCSHPL E + E GV+NAAQRKL ELGI + +P D+F L RI Y Sbjct: 11 DEEQLRLM-EEVCIVVDENDVPLRYGTKKECHLMENINK-GLLHRAFSMFIFDEQNRLLLQQRAEEKITFPSLWTNTCCSHPLDVAGERGNTLPEAVEGVKNAAQRKLFHELGIQAKYIPKDKFQFLTRIHY 140 HSP 2 Score: 38.1206 bits (87), Expect = 1.553e-33 Identity = 16/29 (55.17%), Postives = 20/29 (68.97%), Query Frame = 3 Query: 639 APSDGKWGEHELDYLLFTVRDVSVYPNPD 725 APS G WGEHE+DY+LF V + NP+ Sbjct: 142 APSTGAWGEHEIDYILFFKGKVELDINPN 170
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI_DICDI (Isopentenyl-diphosphate Delta-isomerase OS=Dictyostelium discoideum GN=ipi PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.941e-30 Identity = 68/133 (51.13%), Postives = 95/133 (71.43%), Query Frame = 1 Query: 244 GMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLY-RESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFTPLGRILYR 639 G + +Q LM ++ECI+VD +D+ + +K HLM I + LLHRAFS+FLFN + +LLLQQR+ K+TFP WTNT CSHPL+ SEL+EENA GV+ AA+RKL ELG+ ++ V +D+FT + +I Y+ Sbjct: 15 GHNEIQIELM-KEECIVVDNDDKPIRPGSKKETHLMVNINN-GLLHRAFSIFLFNGEGKLLLQQRALEKITFPGYWTNTVCSHPLWIVGSELVEENAQGVKIAAKRKLNHELGVPLDQVNIDDFTFMTKIHYK 145 HSP 2 Score: 29.261 bits (64), Expect = 1.941e-30 Identity = 11/31 (35.48%), Postives = 20/31 (64.52%), Query Frame = 3 Query: 636 QAPSDGKWGEHELDYLLFTVRD---VSVYPN 719 ++ D +WGEHE+D++L +D ++ PN Sbjct: 147 ESKEDPQWGEHEIDHILIMQKDGITINAEPN 177
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI1_YEAST (Isopentenyl-diphosphate Delta-isomerase OS=Saccharomyces cerevisiae GN=IDI1 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.718e-28 Identity = 69/141 (48.94%), Postives = 88/141 (62.41%), Query Frame = 1 Query: 232 TTDAGMDAVQRRLMFEDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESEL-----IEENALGVRNAAQRKLLDELGICVEDVPV-DEFTPLGRILY 636 T +G D Q +LM E+ CI++D +D +G K CHLME IE LLHRAFSVF+FN + ELLLQQR+ K+TFP +WTNTCCSHPL + EL +++ G AA RKL ELGI ++ +F L RI Y Sbjct: 57 TCFSGHDEEQIKLMNEN-CIVLDWDDNAIGAGTKKVCHLMENIEK-GLLHRAFSVFIFNEQGELLLQQRATEKITFPDLWTNTCCSHPLCIDDELGLKGKLDDKIKGAITAAVRKLDHELGIPEDETKTRGKFHFLNRIHY 195 HSP 2 Score: 33.8834 bits (76), Expect = 1.718e-28 Identity = 15/31 (48.39%), Postives = 21/31 (67.74%), Query Frame = 3 Query: 639 APSDGKWGEHELDYLLF----TVRDVSVYPN 719 APS+ WGEHE+DY+LF +++V PN Sbjct: 197 APSNEPWGEHEIDYILFYKINAKENLTVNPN 227
BLAST of FC921674 vs. ExPASy Swiss-Prot
Match: IDI_SERP5 (Isopentenyl-diphosphate Delta-isomerase OS=Serratia proteamaculans (strain 568) GN=idi PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 7.841e-15 Identity = 46/113 (40.71%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 277 EDECILVDENDRVVGHENKYNCHLMEKIESLNLLHRAFSVFLFNSKYELLLQQRSGTKVTFPLVWTNTCCSHPLYRESELIEENALGVRNAAQRKLLDELGICVEDVPVDEFT 615 ++ ILVD +D +G ++K H LLHRAFS+F+F+S+ LLLQQR+ +K +WTN+CC HP + ES L AAQR+L +E+G E V FT Sbjct: 2 DEMLILVDADDNAIGSQSKTRVHQQ------GLLHRAFSIFIFDSQGRLLLQQRAFSKYHSAGLWTNSCCGHPRWGESTLA---------AAQRRLQEEMGFSAELQQVSSFT 99 The following BLAST results are available for this feature:
BLAST of FC921674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921674 ID=FC921674; Name=FC921674; organism=Citrus clementina; type=EST; length=726bpback to top |