FC921676

Overview
NameFC921676
Unique NameFC921676
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL73_ARATH (GDSL esterase/lipase At5g03820 OS=Arabidopsis thaliana GN=At5g03820 PE=3 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.577e-35
Identity = 75/168 (44.64%), Postives = 110/168 (65.48%), Query Frame = 2
Query:  161 VTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLV 664
            V  +++ GDS VD GNNNRL T  K NF PYG++F     TGRF++G+LATDF AES GFT+    +L       +LL G +FAS  SGYDD TA   + +++++QL+  K Y+  + N+VG ++A +I   +I LLS G++DFL +YY+ P  +R +T +QY + L+
Sbjct:   28 VPALIIMGDSVVDAGNNNRLNTLIKANFPPYGRDFLAHNATGRFSNGKLATDFTAESLGFTSYPVPYLSQEANGTNLLTGANFASGASGYDDGTAIFYNAITLNQQLKNYKEYQNKVTNIVGSERANKIFSGAIHLLSTGSSDFLQSYYINPILNRIFTPDQYSDRLM 195          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: EXL3_ARATH (GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana GN=EXL3 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.691e-35
Identity = 76/167 (45.51%), Postives = 103/167 (61.68%), Query Frame = 2
Query:  170 MLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSS 670
            ++ FGDS VD G NN + T  K +FLPYG NF +G  TGRF DGR+  D +AE  G  + +PA+LDP +K  DLL GVSFAS GSGYD +T  L +V+S+  QL Y + Y   + N+VG  + + I+ NS+FLL  G++D    YY    R  +Y V+ Y   +  S
Sbjct:   44 VIAFGDSIVDTGMNNNVKTVVKCDFLPYGINFQSGVATGRFCDGRVPADLLAEELGIKSIVPAYLDPNLKSKDLLTGVSFASGGSGYDPITPKLVAVISLEDQLSYFEEYIEKVKNIVGEARKDFIVANSLFLLVAGSDDIANTYYTLRARP-EYDVDSYTTLMSDS 209          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL56_ARATH (GDSL esterase/lipase At3g43570 OS=Arabidopsis thaliana GN=At3g43570 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.278e-34
Identity = 79/190 (41.58%), Postives = 112/190 (58.95%), Query Frame = 2
Query:  107 LSQALGIAQFRRIAAQNNVTF--MLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSS 670
            L+  L + +   +    N T   ++VFGDS +D GNNN L T  K NF PYGK++  G  TGRF+DGR+ +D IAE  G    +PA+++P +K  DLL GV+FAS G+GYD LTA + SV+SV  QL Y K Y   +    G +KA++I+ +S FL+   +ND    Y     ++ +Y    Y N+L  S
Sbjct:    8 LTLVLIVVEANAVKQGKNATIPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKIGLAKTLPAYMNPYLKPEDLLKGVTFASGGTGYDPLTAKIMSVISVWDQLIYFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYL---AQAHRYDRTSYANFLADS 194          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL55_ARATH (GDSL esterase/lipase At3g43550 OS=Arabidopsis thaliana GN=At3g43550 PE=2 SV=2)

HSP 1 Score: 145.591 bits (366), Expect = 2.278e-34
Identity = 78/173 (45.09%), Postives = 107/173 (61.85%), Query Frame = 2
Query:  158 NVTF--MLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSS 670
            NVT   ++VFGDS +D GNNN L T  K NF PYGK++  G  TGRF+DGR+ +D IAE  G    +PA+++P +K  DLL GV+FAS G+GYD LTA + SV+SV  QL Y K Y   +    G +KA++I+ +S FL+   +ND    Y     ++ +Y    Y N+L  S
Sbjct:   25 NVTIPALIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGFATGRFSDGRVPSDLIAEKLGLVKTLPAYMNPYLKPHDLLKGVTFASGGTGYDPLTAKIMSVISVWDQLIYFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYL---AQAHRYDRTSYANFLADS 194          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL52_ARATH (GDSL esterase/lipase At3g14820 OS=Arabidopsis thaliana GN=At3g14820 PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 2.975e-34
Identity = 78/184 (42.39%), Postives = 109/184 (59.24%), Query Frame = 2
Query:  125 IAQFRRIAAQNNVTF----MLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLV 664
            + Q    +A  N+T     ++VFGDS +D GNNN + T  K NF PYG++F    PTGRF+DG++ +D IAES G    +P +L   +K  DLL GV FAS GSGYD LT+ L SV+S+S QL+Y + Y   +    G +K + I+  S+FL+   +ND    Y++   RS +Y    Y  YLV
Sbjct:   14 VVQVTTSSAHRNITTTIPALIVFGDSIMDTGNNNDIPTLLKSNFPPYGRDFPGAIPTGRFSDGKVPSDIIAESLGIAKTLPPYLGSNLKPHDLLKGVIFASGGSGYDPLTSTLLSVVSMSDQLKYFQEYLAKIKQHFGEEKVKFILEKSVFLVVSSSNDLAETYWV---RSVEYDRNSYAEYLV 194          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL59_ARATH (GDSL esterase/lipase At3g53100 OS=Arabidopsis thaliana GN=At3g53100 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.130e-33
Identity = 73/170 (42.94%), Postives = 106/170 (62.35%), Query Frame = 2
Query:  161 VTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSS 670
            V  +++FGDS VD GNNN L +  K NFLPYG++F + RPTGRF +G+LA DF AE  GF++  PAFL       ++L G +FASA SGY D T+     +S++RQL Y + Y+  +  ++G   A  +    I +LS G++DFL NYY+ P  +   T +Q+ + L+ S
Sbjct:   27 VPALIMFGDSIVDVGNNNNLLSIVKSNFLPYGRDFIDQRPTGRFCNGKLAVDFSAEYLGFSSYPPAFLSREASNENILIGANFASASSGYYDATSVPFGSISLTRQLSYYRAYQNRVTRMIGRGNARILFSRGIHILSAGSSDFLQNYYINPLLNILNTPDQFADILLRS 196          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL47_ARATH (GDSL esterase/lipase At2g40250 OS=Arabidopsis thaliana GN=At2g40250 PE=2 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.130e-33
Identity = 72/171 (42.11%), Postives = 108/171 (63.16%), Query Frame = 2
Query:  161 VTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSSM 673
            +T +  FGDS+VD GNNN + T  + N  PYGK+F +   TGRF+DG+LATDFI  S G    +PA+L+P++K +DLL GVSFASAG G DD TA  S  +++ +Q  Y +     + +LVG  +   +I N++F++S GTND + N Y +       +V  Y++ L++ +
Sbjct:   34 ITALYAFGDSTVDSGNNNYIPTLFQSNHPPYGKSFPSKLSTGRFSDGKLATDFIVSSLGLKPTLPAYLNPSVKPVDLLTGVSFASAGGGLDDRTAKSSLTITMDKQWSYFEEALGKMKSLVGDSETNRVIKNAVFVISAGTNDMIFNVY-DHVLGSLISVSDYQDSLLTKV 203          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL4_ARATH (GDSL esterase/lipase At1g20120 OS=Arabidopsis thaliana GN=At1g20120 PE=2 SV=2)

HSP 1 Score: 142.895 bits (359), Expect = 1.476e-33
Identity = 74/174 (42.53%), Postives = 106/174 (60.92%), Query Frame = 2
Query:  155 NNVTF--MLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSS 670
            +N TF  +  FGDS +D GNN+ + T  K NFLPYG NF +  PTGRF +G++ +DFIA+  G    +PA+L P + + DLL GVSFAS GSGYD LT  + S + +S+QL Y + Y   +   VG +KAE II   + ++  G++D    YY E      Y ++ Y +++ SS
Sbjct:   72 HNTTFPAIFAFGDSILDTGNNDYILTLIKANFLPYGMNFPDKVPTGRFCNGKIPSDFIADYIGVKPVVPAYLRPGLTQEDLLTGVSFASGGSGYDPLTPIVVSAIPMSKQLTYFQEYIEKVKGFVGKEKAEHIISKGLAIVVAGSDDLANTYYGEHLEEFLYDIDTYTSFMASS 245          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL30_ARATH (GDSL esterase/lipase At1g73610 OS=Arabidopsis thaliana GN=At1g73610 PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.289e-33
Identity = 73/172 (42.44%), Postives = 104/172 (60.47%), Query Frame = 2
Query:  155 NNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVG-VKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVS 667
            + V+ +  FGDS +D GNNN L + +K NF PYG++F  GR TGRF +GR+ +D IAE  G  N +PA+ DP +   DL  GV FAS GSG D +TA  +  + VS Q+   ++Y   L  +VG  ++A  +I N+++L+S G ND    Y+    R  QYT+  Y + LVS
Sbjct:   31 STVSALFAFGDSILDTGNNNLLLSVSKVNFYPYGRDFIGGRATGRFGNGRVFSDIIAEGLGLKNLLPAYRDPYLWNNDLTTGVCFASGGSGLDPITARTTGSIWVSDQVTDFQNYITRLNGVVGNQEQANAVISNAVYLISAGNNDIAITYFTTGARRLQYTLPAYNDQLVS 202          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL24_ARATH (GDSL esterase/lipase At1g58480 OS=Arabidopsis thaliana GN=At1g58480 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.289e-33
Identity = 74/167 (44.31%), Postives = 103/167 (61.68%), Query Frame = 2
Query:  170 MLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSS 670
            ++VFGDS +D GNNN L T  K NF PYGK++  G  TGRF+DGR+ +D IAE  G    +PA+++  +K  DLL GV+FAS G+GYD LTA + SV+SV  QL Y K Y   +    G +KA++I+ +S FL+   +ND    Y     ++ +Y    Y N+L  S
Sbjct:   31 LIVFGDSIMDTGNNNNLPTLLKCNFPPYGKDYPGGDATGRFSDGRVPSDLIAEKLGLAKTLPAYMNSYLKPEDLLKGVTFASRGTGYDPLTAKIMSVISVWDQLIYFKEYISKIKRHFGEEKAKDILEHSFFLVVSSSNDLAHTYL---AQAHRYDRTSYANFLADS 194          
The following BLAST results are available for this feature:
BLAST of FC921676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
GDL73_ARATH1.577e-3544.64GDSL esterase/lipase At5g03820 OS=Arabidopsis thal... [more]
EXL3_ARATH2.691e-3545.51GDSL esterase/lipase EXL3 OS=Arabidopsis thaliana ... [more]
GDL56_ARATH2.278e-3441.58GDSL esterase/lipase At3g43570 OS=Arabidopsis thal... [more]
GDL55_ARATH2.278e-3445.09GDSL esterase/lipase At3g43550 OS=Arabidopsis thal... [more]
GDL52_ARATH2.975e-3442.39GDSL esterase/lipase At3g14820 OS=Arabidopsis thal... [more]
GDL59_ARATH1.130e-3342.94GDSL esterase/lipase At3g53100 OS=Arabidopsis thal... [more]
GDL47_ARATH1.130e-3342.11GDSL esterase/lipase At2g40250 OS=Arabidopsis thal... [more]
GDL4_ARATH1.476e-3342.53GDSL esterase/lipase At1g20120 OS=Arabidopsis thal... [more]
GDL30_ARATH3.289e-3342.44GDSL esterase/lipase At1g73610 OS=Arabidopsis thal... [more]
GDL24_ARATH3.289e-3344.31GDSL esterase/lipase At1g58480 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32108A09EF RVDevelopN Citrus clementina cDNA clone C32108A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921676 ID=FC921676; Name=FC921676; organism=Citrus clementina; type=EST; length=677bp
GACGTTAACAAACAAAAGGTGCAAAAACTTGTCCTTCACAATTGCAATGG
CTCTGAAGGCTATGAGGGTGTTAGTGGTGATGGCTTTGGTGGCAGCCTTG
ATGCAACTCTCACAGGCTTTGGGCATTGCTCAATTTAGAAGAATAGCAGC
TCAAAACAATGTGACTTTTATGTTGGTTTTTGGAGATTCCAGTGTTGATC
CTGGCAACAACAACCGTCTTGCAACCACAACGAAGGGCAATTTTCTTCCT
TACGGGAAGAATTTCTTTAATGGCCGTCCCACTGGAAGGTTCACTGATGG
CAGGCTTGCCACTGACTTCATTGCTGAATCATTTGGCTTTACAAATGCCA
TTCCGGCCTTTCTTGATCCCACTATCAAGAAGATAGATTTGTTACATGGA
GTTAGCTTTGCTTCTGCCGGTTCCGGTTATGATGACCTCACTGCCAATCT
CTCTAGTGTGTTATCTGTATCAAGACAATTGGAGTACCTTAAGCATTACA
AGATTCACCTGGGAAATTTGGTGGGTGTGAAGAAGGCAGAAGAAATCATT
GGCAATTCAATATTTTTACTGAGTATGGGCACAAATGACTTCCTCCCAAA
TTATTACTTGGAGCCCACTCGCTCCAGGCAATATACTGTGGAACAGTATG
AAAATTACTTGGTCTCTTCAATGTTTG
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