FC921676

Overview
NameFC921676
Unique NameFC921676
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: APG_ARATH (Anter-specific proline-rich protein APG OS=Arabidopsis thaliana GN=APG PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.297e-25
Identity = 60/174 (34.48%), Postives = 96/174 (55.17%), Query Frame = 2
Query:  179 FGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLV----------GVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSS 670
            FGDS  D GNNN L T  K N+ PYG +F     TGRF++G +A+D++A+  G    +PA+LDP I+  DLL GVSFAS G+GY+  T+  ++ + +  QL Y + Y   +  LV          G++K  ++I   + ++  G+ND +  Y+    +  +  ++ Y   +  S
Sbjct:  208 FGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGVKEIVPAYLDPKIQPNDLLTGVSFASGGAGYNPTTSEAANAIPMLDQLTYFQDYIEKVNRLVRQEKSQYKLAGLEKTNQLISKGVAIVVGGSNDLIITYFGSGAQRLKNDIDSYTTIIADS 381          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: APG_BRANA (Anther-specific proline-rich protein APG (Fragment) OS=Brassica napus GN=APG PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.306e-25
Identity = 62/170 (36.47%), Postives = 96/170 (56.47%), Query Frame = 2
Query:  179 FGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDP------TIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSS 670
            FGDS  D GNNN L T  K N+ PYG +F  G  TGRF++GR+A+D+I++  G    +PA++D        +++ DLL GVSFAS G+GY   T+    V ++  QL Y + YK  +  LVG KK ++I+     ++  G+ND +  Y+    +  +  V+ +   +  S
Sbjct:  129 FGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGVKEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGAGYLPQTSESWKVTTMLDQLTYFQDYKKRMKKLVGKKKTKKIVSKGAAIVVAGSNDLIYTYFGNGAQHLKNDVDSFTTMMADS 298          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL75_ARATH (GDSL esterase/lipase At5g08460 OS=Arabidopsis thaliana GN=At5g08460 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.253e-24
Identity = 57/146 (39.04%), Postives = 88/146 (60.27%), Query Frame = 2
Query:  170 MLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSG-YDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNY 604
            M VFGDS VD GNNN L +  + N+LPYG +F   +PTGRF++G+   DFI E  G    IPAF+D     +D+LHGV++ASA  G  ++   +L    S+ RQ+E  +   + +   +  +  +E +  S+ ++S+G ND++ NY
Sbjct:   50 MFVFGDSLVDNGNNNHLNSLARSNYLPYGIDFAGNQPTGRFSNGKTIVDFIGELLGLPE-IPAFMDTVDGGVDILHGVNYASAAGGILEETGRHLGERFSMGRQVENFEKTLMEISRSMRKESVKEYMAKSLVVVSLGNNDYINNY 194          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL15_ARATH (GDSL esterase/lipase At1g29670 OS=Arabidopsis thaliana GN=At1g29670 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.760e-24
Identity = 69/177 (38.98%), Postives = 102/177 (57.63%), Query Frame = 2
Query:  149 AQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTA-NLSSVLSVSRQLEYLKHYKIHLGNLVGVK-KAEEIIGNSIFLLSMGTNDFLPNYYLEP--TRSRQYTVEQYENYLVS 667
            AQ  V    VFGDS VD GNNN L +  + N+ PYG +F  G PTGRF++G+   D IAE  GF   IPA+   T+    +L GV++ASA +G  + T   L   +S S Q+   +     +  L+G + +A + +   I+ + +G+ND+L NY++    + SRQ+T EQY N L+S
Sbjct:   26 AQAQVPCFFVFGDSLVDNGNNNGLISIARSNYFPYGIDF--GGPTGRFSNGKTTVDVIAELLGFNGYIPAY--NTVSGRQILSGVNYASAAAGIREETGRQLGQRISFSGQVRNYQTTVSQVVQLLGDETRAADYLKRCIYSVGLGSNDYLNNYFMPTFYSSSRQFTPEQYANDLIS 198          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GLIP5_ARATH (GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=GLIP5 PE=2 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 8.978e-23
Identity = 65/148 (43.92%), Postives = 97/148 (65.54%), Query Frame = 2
Query:  155 NNVTFMLVFGDSSVDPGNNNRLATTT--KGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDF 592
            NNVT + +FGDS +D GNNN + TTT  + NF PYG+ FF G PTGRF+DGRL +DFIAE +     IP FL+P   +   L+GV+FASAG+G    T    SV+++  QL++ K  +       G +++++ I  +++L+S+G+ND+
Sbjct:   44 NNVTALFLFGDSFLDAGNNNYINTTTLDQANFPPYGQTFF-GLPTGRFSDGRLISDFIAE-YANLPLIPPFLEPGNSQ-KKLYGVNFASAGAGALVETFQ-GSVINLRTQLDHYKKVERLWRTNFGKEESKKRISRAVYLISIGSNDY 187          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL64_ARATH (GDSL esterase/lipase At4g16230 OS=Arabidopsis thaliana GN=At4g16230 PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.693e-21
Identity = 56/145 (38.62%), Postives = 87/145 (60.00%), Query Frame = 2
Query:  176 VFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANL-SSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYY 607
            VFGDS VD GNNN LAT +K N++P G +F  G PTGRFT+GR   D + ++ G     P +L PT     +L+GV++AS GSG  + T  L    ++V  QL+     +  + + +G  +A ++  ++IF ++ G+ND + NY+
Sbjct:   33 VFGDSLVDAGNNNYLATLSKANYVPNGIDF--GSPTGRFTNGRTIVDIVYQALGSDELTPPYLAPTTSGSLILNGVNYASGGSGILNSTGKLFGERINVDAQLDNFATTRQDIISWIGESEAAKLFRSAIFSVTTGSNDLINNYF 175          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL38_ARATH (GDSL esterase/lipase At2g23540 OS=Arabidopsis thaliana GN=At2g23540 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.097e-20
Identity = 59/147 (40.14%), Postives = 84/147 (57.14%), Query Frame = 2
Query:  176 VFGDSSVDPGNNNRLATTTKGNFLPYGKNF--FNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANL-SSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIG-NSIFLLSMGTNDFLPNY 604
            +FGDS VD GNNN L+T ++ N  P G +F    G PTGRFT+GR   D + E  G  N    FL P  K   LL GV++AS G G  + T  +  + L +  Q+++    +    +L+G +KA++ I   SIF +++G NDFL NY
Sbjct:   51 IFGDSLVDAGNNNYLSTLSRANMKPNGIDFKASGGTPTGRFTNGRTIGDIVGEELGSANYAIPFLAPDAKGKALLAGVNYASGGGGIMNATGRIFVNRLGMDVQVDFFNTTRKQFDDLLGKEKAKDYIAKKSIFSITIGANDFLNNY 197          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL36_ARATH (GDSL esterase/lipase At2g19050 OS=Arabidopsis thaliana GN=At2g19050 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.193e-20
Identity = 58/178 (32.58%), Postives = 101/178 (56.74%), Query Frame = 2
Query:  146 AAQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGY-DDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEP--TRSRQYTVEQYENYLVSS 670
            A    V    VFGDS  D GNNN L T+ K N+ PYG +F  G PTGRF++GR   D IAE   F++ IP F   + ++  +  G+++AS G G  ++ + +L  ++S  +Q+      K H   ++  K  EE +   ++ +++G+ND+L NY++      +++++ ++Y + L+ S
Sbjct:   24 ALGQRVPCYFVFGDSVFDNGNNNVLNTSAKVNYSPYGIDFARG-PTGRFSNGRNIPDIIAELMRFSDYIPPFTGASPEQAHI--GINYASGGGGIREETSQHLGEIISFKKQI------KNHRSMIMTAKVPEEKLNKCLYTINIGSNDYLNNYFMPAPYMTNKKFSFDEYADSLIRS 192          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL68_ARATH (GDSL esterase/lipase At4g30140 OS=Arabidopsis thaliana GN=At4g30140 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.170e-20
Identity = 59/167 (35.33%), Postives = 95/167 (56.89%), Query Frame = 2
Query:  176 VFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGY-DDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEP--TRSRQYTVEQYENYLVS 667
            VFGDS  D GNNN L T  K N+LPYG ++F G PTGRF++GR   D IAE  GF N IP F   +  + ++  G+++AS   G  ++ + N+   +S+ +Q+    H+   +   V + +  +     ++ +++G+ND+L NY+L P     R +  +QY   L+S
Sbjct:   36 VFGDSVFDNGNNNALNTKAKVNYLPYGIDYFQG-PTGRFSNGRNIPDVIAELAGFNNPIPPFAGASQAQANI--GLNYASGAGGIREETSENMGERISLRQQVN--NHFSAIITAAVPLSRLRQ----CLYTINIGSNDYLNNYFLSPPTLARRLFNPDQYARSLIS 193          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL58_ARATH (GDSL esterase/lipase At3g50400 OS=Arabidopsis thaliana GN=At3g50400 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.114e-20
Identity = 67/189 (35.45%), Postives = 99/189 (52.38%), Query Frame = 2
Query:  128 AQFRRIAA---QNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNF--FNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANL-SSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEII-GNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSSM 673
            ++F R+A+   Q  +    VFGDS VD GNNN L T ++ N  P G +F    G PTGRFT+GR   D + E  G  +    +L P      LL+GV++AS G G  + T ++  + L +  Q++Y  + +     L+G  KA + I   S+F + +G+NDFL N YL P  + Q  + Q     V  M
Sbjct:   18 SRFSRVASAGDQRALAASFVFGDSLVDAGNNNYLQTLSRANSPPNGIDFKPSRGNPTGRFTNGRTIADIVGEKLGQQSYAVPYLAPNASGEALLNGVNYASGGGGILNATGSVFVNRLGMDIQVDYFTNTRKQFDKLLGQDKARDYIRKRSLFSVVIGSNDFL-NNYLVPFVAAQARLTQTPETFVDDM 205          
The following BLAST results are available for this feature:
BLAST of FC921676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
APG_ARATH3.297e-2534.48Anter-specific proline-rich protein APG OS=Arabido... [more]
APG_BRANA4.306e-2536.47Anther-specific proline-rich protein APG (Fragment... [more]
GDL75_ARATH1.253e-2439.04GDSL esterase/lipase At5g08460 OS=Arabidopsis thal... [more]
GDL15_ARATH4.760e-2438.98GDSL esterase/lipase At1g29670 OS=Arabidopsis thal... [more]
GLIP5_ARATH8.978e-2343.92GDSL esterase/lipase 5 OS=Arabidopsis thaliana GN=... [more]
GDL64_ARATH1.693e-2138.62GDSL esterase/lipase At4g16230 OS=Arabidopsis thal... [more]
GDL38_ARATH1.097e-2040.14GDSL esterase/lipase At2g23540 OS=Arabidopsis thal... [more]
GDL36_ARATH3.193e-2032.58GDSL esterase/lipase At2g19050 OS=Arabidopsis thal... [more]
GDL68_ARATH4.170e-2035.33GDSL esterase/lipase At4g30140 OS=Arabidopsis thal... [more]
GDL58_ARATH7.114e-2035.45GDSL esterase/lipase At3g50400 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionC32108A09EF RVDevelopN Citrus clementina cDNA clone C32108A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921676 ID=FC921676; Name=FC921676; organism=Citrus clementina; type=EST; length=677bp
GACGTTAACAAACAAAAGGTGCAAAAACTTGTCCTTCACAATTGCAATGG
CTCTGAAGGCTATGAGGGTGTTAGTGGTGATGGCTTTGGTGGCAGCCTTG
ATGCAACTCTCACAGGCTTTGGGCATTGCTCAATTTAGAAGAATAGCAGC
TCAAAACAATGTGACTTTTATGTTGGTTTTTGGAGATTCCAGTGTTGATC
CTGGCAACAACAACCGTCTTGCAACCACAACGAAGGGCAATTTTCTTCCT
TACGGGAAGAATTTCTTTAATGGCCGTCCCACTGGAAGGTTCACTGATGG
CAGGCTTGCCACTGACTTCATTGCTGAATCATTTGGCTTTACAAATGCCA
TTCCGGCCTTTCTTGATCCCACTATCAAGAAGATAGATTTGTTACATGGA
GTTAGCTTTGCTTCTGCCGGTTCCGGTTATGATGACCTCACTGCCAATCT
CTCTAGTGTGTTATCTGTATCAAGACAATTGGAGTACCTTAAGCATTACA
AGATTCACCTGGGAAATTTGGTGGGTGTGAAGAAGGCAGAAGAAATCATT
GGCAATTCAATATTTTTACTGAGTATGGGCACAAATGACTTCCTCCCAAA
TTATTACTTGGAGCCCACTCGCTCCAGGCAATATACTGTGGAACAGTATG
AAAATTACTTGGTCTCTTCAATGTTTG
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