FC921676

Overview
NameFC921676
Unique NameFC921676
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length677
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL33_ARATH (GDSL esterase/lipase At2g04020 OS=Arabidopsis thaliana GN=At2g04020 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.636e-17
Identity = 58/175 (33.14%), Postives = 92/175 (52.57%), Query Frame = 2
Query:  158 NVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLH-GVSFASAGSGYDDLTANLS-SVLSVSRQLEYL-----KHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYL 661
            N     V GDS VDPGNNN L T  + N+ PYG +F  G+ TGRF++G+   D+IA  +     +PA+L  +  + D +  G+++ASAG G   LT  ++   LS+S+Q++       KH K    N     +  E + +S+F+  +G ND+   +Y   T +  +  E    +L
Sbjct:   40 NFPAFYVIGDSLVDPGNNNHLPTMIRANYPPYGSDFEGGKATGRFSNGKTIADYIAIYYKLP-LVPAYLGLSDDRKDTISTGMNYASAGCGIRRLTGKIAGKCLSLSKQVDLFEETIEKHLKT---NFKTPYELREHLAHSLFMTVIGVNDY-AFFYTRLTDANDFADELLHKFL 209          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL31_ARATH (GDSL esterase/lipase At1g74460 OS=Arabidopsis thaliana GN=At1g74460 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.636e-17
Identity = 55/170 (32.35%), Postives = 98/170 (57.65%), Query Frame = 2
Query:  176 VFGDSSVDPGNNNRLATTTKGNFLP-YGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKK-IDLLHGVSFASAGSGYDDLTAN-LSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEP-TRSRQYTVEQYENYLVSSM 673
            +FGDS  D GNN  L  +     LP YG +F NG P GRFT+GR  +D I +  G    + AFLDP++ + + L +GV++AS G G  + T        S+ +Q+E  +  +  +   +G K+A++   ++ +++++G+NDF+ NY +   + S +Y  + + +YL+ ++
Sbjct:   26 IFGDSLSDVGNNKNLPRSLATANLPFYGIDFGNGLPNGRFTNGRTVSDIIGDKIGLPRPV-AFLDPSMNEDVILENGVNYASGGGGILNETGGYFIQRFSLWKQIELFQGTQDVVVAKIGKKEADKFFQDARYVVALGSNDFINNYLMPVYSDSWKYNDQTFVDYLMETL 194          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL32_ARATH (GDSL esterase/lipase At2g03980 OS=Arabidopsis thaliana GN=At2g03980 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.361e-17
Identity = 59/173 (34.10%), Postives = 94/173 (54.34%), Query Frame = 2
Query:  158 NVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLD-PTIKKIDLLHGVSFASAGSGYDDLTA-NLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAE--EIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLV 664
            N     V GDS VD GNNN L T  K NF PYG +F  G+ TGRF++G+   D+IA  +G    +PA+L     +K  +  G+++ASAG G    T   + + LS+S Q++  +   I        KK+E  E +  S+F++++G ND+    + E T + ++  +   +YL+
Sbjct:   40 NFPAFYVIGDSLVDSGNNNHLTTMVKSNFPPYGSDFEGGKATGRFSNGKTIADYIAIYYGLP-LVPAYLGLSQEEKNSISTGINYASAGCGILPQTGRQIGTCLSLSVQVDMFQE-TITNNLKKNFKKSELREHLAESLFMIAIGVNDY-TFLFNETTDANEFANKLLHDYLL 209          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GLIP6_ARATH (GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=GLIP6 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.232e-16
Identity = 64/180 (35.56%), Postives = 96/180 (53.33%), Query Frame = 2
Query:  149 AQNNVTFMLVFGDSSVDPGNNN-RLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKI----DLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSSM 673
            + + V  +  FGDS  D GNN+     T + +F PYG +FF+ RPTGRFT+GR   DFI+E  G     P FL+  I+ +    +  +G++FASAGSG    T     V  +  QL+  +   +   NL+     + II  S+FLL  G+ND   NY+L P R+   + + Y N ++  +
Sbjct:   25 SSSTVPAIFTFGDSIFDAGNNHYNKNCTAQADFPPYGSSFFH-RPTGRFTNGRTVADFISEFVGLPLQKP-FLELQIQILNGTSNFSNGINFASAGSGLLLDTNKFMGVTPIQTQLQQFQ--TLVEQNLI----EKSIIQESLFLLETGSNDIF-NYFL-PFRAPTLSPDAYVNAMLDQV 194          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GRIP4_ARATH (GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=GLIP4 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 8.139e-16
Identity = 54/180 (30.00%), Postives = 91/180 (50.56%), Query Frame = 2
Query:  152 QNNVTFMLVFGDSSVDPGNNNRLATTT--KGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSG-----YDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSS 670
            + N   +  FGDS  + GNNN   + +  + NF PYGK  F   PTGR +DGR+  DFIAE + +   IP  L P      L +G++FA+  +G     +     NLS  L    QL   K+ +  L + +G  +A  +I  +++L  +G ND+   ++   +     T E++ ++++ +
Sbjct:   32 KTNQAALFAFGDSLFEAGNNNYFDSISSFRSNFWPYGKTTFKF-PTGRVSDGRIMIDFIAE-YAWLPLIPPNLQPGYSNSQLTYGLNFATTAAGVFAGTFPGSVTNLSKDLGT--QLNNFKNVEKTLRSNLGDAEARRVISKAVYLFHIGANDYQYPFFANTSTFSNTTKERFIDFVIGN 207          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GLIP7_ARATH (GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=GLIP7 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.368e-15
Identity = 59/179 (32.96%), Postives = 92/179 (51.40%), Query Frame = 2
Query:  176 VFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTA----------NLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTR---SRQYTVEQYENYLVSSM 673
            VFGDS VD GNNN + T  + N+ PYG +F  G PTGRF +GR   D+ A   G    +P +L P     + L GV++ASA +G  D T              S   ++ +L   + ++    N   ++K    +  SI  +++G+ND++ N YL P R   S+ Y+ E Y + L+ ++
Sbjct:   33 VFGDSLVDSGNNNYIPTLARANYFPYGIDF--GFPTGRFCNGRTVVDYGATYLGLP-LVPPYLSPLSIGQNALRGVNYASAAAGILDETGRHYGARTTFNGQISQFEITIELRLRRFFQ----NPADLRK---YLAKSIIGINIGSNDYI-NNYLMPERYSTSQTYSGEDYADLLIKTL 200          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL80_ARATH (GDSL esterase/lipase At5g37690 OS=Arabidopsis thaliana GN=At5g37690 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.697e-13
Identity = 49/170 (28.82%), Postives = 91/170 (53.53%), Query Frame = 2
Query:  176 VFGDSSVDPGNNNRLA-TTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSG-YDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEP--TRSRQYTVEQYENYLVSSM 673
            +FGDS  + GNNN L  +  + +F  YG +F  G+ TGRFT+GR   D I+   G  +  P +L  +      L G+++AS G+G  ++        L+ + Q+   K  K  +   +G   A + + ++++ + +G+ND++ N +L+P     +QYT +++   L S++
Sbjct:   30 IFGDSLTEVGNNNFLQYSLARADFPYYGVDFSGGKATGRFTNGRTIGDIISTKLGILSP-PPYLSLSQNDDAFLSGINYASGGAGILNETGIYFIQRLTFNDQINCFKKTKEVIRAKIGDGAANKHVNDAMYFIGLGSNDYV-NNFLQPFMADGQQYTHDEFVELLTSTL 197          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL63_ARATH (GDSL esterase/lipase At4g16220 OS=Arabidopsis thaliana GN=At4g16220 PE=2 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.216e-13
Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 2
Query:  149 AQNNVTFMLVFGDSSVDPGNNNRLATTTKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSG 427
            A  ++    VFGDS V+ GNNN LAT  K N  P G +F  G PTGRFT+GR   D I ++ G     P +L PT +   +L+G ++A  GSG
Sbjct:   24 AGKDIPANFVFGDSLVEVGNNNYLATLAKANNFPNGIDF--GSPTGRFTNGRTIVDIIYQALGSDELTPPYLAPTTRGPLILNGANYAPGGSG 114          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GDL87_ARATH (GDSL esterase/lipase At5g55050 OS=Arabidopsis thaliana GN=At5g55050 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.876e-12
Identity = 57/176 (32.39%), Postives = 88/176 (50.00%), Query Frame = 2
Query:  170 MLVFGDSSVDPGNNNRLATT-TKGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIP-----AFLDPTIKKIDLLHGVSFASAGSG-YDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEI-IGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSSM 673
            + VFGDS VD GNNN L  + +K N+   G +F N +PTGRF +G+ A D IAE FG     P       L    +K   + GV+FAS G+G ++     L   + +S+Q+       IH   +     A ++ +  S+F + +G+ND L +Y+      RQ   +QY   +   +
Sbjct:   40 LYVFGDSLVDAGNNNYLPISISKANYPHNGVDFPNKKPTGRFCNGKNAADAIAEKFGLPLPPPYLSLRGLLKREKRKSAAVTGVNFASGGAGIFNSSDQKLGQAIPLSKQVN--NWLSIHEEVMKLEPSAAQLHLSKSLFTVVIGSND-LFDYFGSFKLRRQSNPQQYTQLMADKL 212          
BLAST of FC921676 vs. ExPASy Swiss-Prot
Match: GLIP3_ARATH (GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=GLIP3 PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 5.459e-12
Identity = 48/174 (27.59%), Postives = 85/174 (48.85%), Query Frame = 2
Query:  158 NVTFMLVFGDSSVDPGNNNRLATTT--KGNFLPYGKNFFNGRPTGRFTDGRLATDFIAESFGFTNAIPAFLDPTIKKIDLLHGVSFASAGSGYDDLTANLSSVLSVSRQLEYLKHYKIHLGNLVGVKKAEEIIGNSIFLLSMGTNDFLPNYYLEPTRSRQYTVEQYENYLVSSM 673
            N   + VFGDS  D GNNN + T +  + N  PYG+  F   PTGR +DG            +  +IP  L P        +GVSFASAG+G     + L  V+++  QL   K  +  L + +G  + + +   +++L  +G ND+   +    +  +  + E++ ++++ ++
Sbjct:   32 NQAALFVFGDSLFDAGNNNYINTVSSFRSNIWPYGQTNFK-FPTGRLSDG--------PEKAWLPSIPPNLQPNNGNNQFTYGVSFASAGAG-ALAESFLGMVINLGTQLNNFKDVEKSLRSELGDAETKRVFSRAVYLFHIGANDYFYPFSANSSTFKSNSKEKFVDFVIGNI 195          
The following BLAST results are available for this feature:
BLAST of FC921676 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
GDL33_ARATH5.636e-1733.14GDSL esterase/lipase At2g04020 OS=Arabidopsis thal... [more]
GDL31_ARATH5.636e-1732.35GDSL esterase/lipase At1g74460 OS=Arabidopsis thal... [more]
GDL32_ARATH7.361e-1734.10GDSL esterase/lipase At2g03980 OS=Arabidopsis thal... [more]
GLIP6_ARATH6.232e-1635.56GDSL esterase/lipase 6 OS=Arabidopsis thaliana GN=... [more]
GRIP4_ARATH8.139e-1630.00GDSL esterase/lipase 4 OS=Arabidopsis thaliana GN=... [more]
GLIP7_ARATH2.368e-1532.96GDSL esterase/lipase 7 OS=Arabidopsis thaliana GN=... [more]
GDL80_ARATH1.697e-1328.82GDSL esterase/lipase At5g37690 OS=Arabidopsis thal... [more]
GDL63_ARATH2.216e-1344.09GDSL esterase/lipase At4g16220 OS=Arabidopsis thal... [more]
GDL87_ARATH1.876e-1232.39GDSL esterase/lipase At5g55050 OS=Arabidopsis thal... [more]
GLIP3_ARATH5.459e-1227.59GDSL esterase/lipase 3 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionC32108A09EF RVDevelopN Citrus clementina cDNA clone C32108A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921676 ID=FC921676; Name=FC921676; organism=Citrus clementina; type=EST; length=677bp
GACGTTAACAAACAAAAGGTGCAAAAACTTGTCCTTCACAATTGCAATGG
CTCTGAAGGCTATGAGGGTGTTAGTGGTGATGGCTTTGGTGGCAGCCTTG
ATGCAACTCTCACAGGCTTTGGGCATTGCTCAATTTAGAAGAATAGCAGC
TCAAAACAATGTGACTTTTATGTTGGTTTTTGGAGATTCCAGTGTTGATC
CTGGCAACAACAACCGTCTTGCAACCACAACGAAGGGCAATTTTCTTCCT
TACGGGAAGAATTTCTTTAATGGCCGTCCCACTGGAAGGTTCACTGATGG
CAGGCTTGCCACTGACTTCATTGCTGAATCATTTGGCTTTACAAATGCCA
TTCCGGCCTTTCTTGATCCCACTATCAAGAAGATAGATTTGTTACATGGA
GTTAGCTTTGCTTCTGCCGGTTCCGGTTATGATGACCTCACTGCCAATCT
CTCTAGTGTGTTATCTGTATCAAGACAATTGGAGTACCTTAAGCATTACA
AGATTCACCTGGGAAATTTGGTGGGTGTGAAGAAGGCAGAAGAAATCATT
GGCAATTCAATATTTTTACTGAGTATGGGCACAAATGACTTCCTCCCAAA
TTATTACTTGGAGCCCACTCGCTCCAGGCAATATACTGTGGAACAGTATG
AAAATTACTTGGTCTCTTCAATGTTTG
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