FC921677

Overview
NameFC921677
Unique NameFC921677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length646
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK2_MESAU (Cell division protein kinase 2 OS=Mesocricetus auratus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 9.061e-62
Identity = 115/209 (55.02%), Postives = 162/209 (77.51%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            M+ F+K+EK+GEGTYG VY+A+ K TG++VALKK RL  + EGVP T +RE+S+L+ L+  P++V+L+DV   +NK     LYLVFE +  DLKK++ +   TG  IP+  +KS ++QL +G+AFCH H +LHRDLKP NLL++ +  ++K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG  +YSTA D+WS+ CIFAE+VTR+
Sbjct:    1 MENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH-PNIVKLLDVIHTENK-----LYLVFELLHQDLKKFMDASAVTG--IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEG-SIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR 200          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC22_MEDSA (Cell division control protein 2 homolog 2 OS=Medicago sativa GN=CDC2B PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.183e-61
Identity = 109/209 (52.15%), Postives = 157/209 (75.12%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            M+ +EK+EK+GEGTYG VY+AR++AT + +ALKK RL ++DEGVP T +RE+S+L+ +    ++VRL DV   + +     LYLVFEY+D DLKK++ S  +  ++     +K  +YQ+  G+A+CH H +LHRDLKP NLL+DR +  +K+AD GLARAF +P++ +THE++TLWYRAPE+LLGS HYST  D+WSV CIFAE++ ++
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHR-NIVRLQDVVHSEKR-----LYLVFEYLDLDLKKFMDSSPEFAKD--QRQIKMFLYQILCGIAYCHSHRVLHRDLKPQNLLIDRSSNAVKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMINQR 201          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK2_CARAU (Cell division protein kinase 2 OS=Carassius auratus GN=cdk2 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.019e-61
Identity = 114/209 (54.55%), Postives = 162/209 (77.51%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            M++F+K+EK+GEGTYG VY+A+ K TG+ VALKK RL  + EGVP T +RE+S+L+ L+  P++V+L DV   +NK     LYLVFE++  DLK+++ S   TG ++P+  VKS ++QL +G+AFCH H +LHRDLKP NLL++ +   +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG  +YSTA D+WS+ CIFAE++TR+
Sbjct:    1 MESFQKVEKIGEGTYGVVYKAKNKVTGETVALKKIRLDTETEGVPSTAIREISLLKELNH-PNIVKLHDVIHTENK-----LYLVFEFLHQDLKRFMDSSTVTGISLPL--VKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAQG-EIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMITRK 200          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDKA2_ORYSJ (Cyclin-dependent kinase A-2 OS=Oryza sativa subsp. japonica GN=CDKA-2 PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 3.443e-61
Identity = 110/209 (52.63%), Postives = 155/209 (74.16%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            M+ +EK+EK+GEGTYG VY+ + + T + +ALKK RL ++DEGVP T +RE+S+L+ +    ++VRL DV   +       +YLVFEY+D DLKK++ S      +     VKS +YQ+ +G+A+CH H +LHRDLKP NLL+DR+T +LK+AD GLARAF +P++ +THE++TLWYRAPE+LLG+ HYST  DMWSV CIFAE+V ++
Sbjct:    1 MEQYEKVEKIGEGTYGVVYKGKHRHTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHR-NIVRLQDVVHKEK-----CIYLVFEYLDLDLKKHMDSSPDFKNH---RIVKSFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARHYSTPVDMWSVGCIFAEMVNQK 200          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK2_MOUSE (Cell division protein kinase 2 OS=Mus musculus GN=Cdk2 PE=1 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 5.873e-61
Identity = 116/212 (54.72%), Postives = 162/212 (76.42%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAE--LVTRQH 640
            M+ F+K+EK+GEGTYG VY+A+ K TG++VALKK RL  + EGVP T +RE+S+L+ L+  P++V+L+DV   +NK     LYLVFE++  DLKK++ +   TG  IP+  +KS ++QL +G+AFCH H +LHRDLKP NLL++ +  ++K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG  +YSTA D+WS+ CIFAE  LV  QH
Sbjct:    1 MENFQKVEKIGEGTYGVVYKAKNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH-PNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTG--IPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINAEG-SIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMHLVCTQH 203          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2_DICDI (Cell division control protein 2 homolog OS=Dictyostelium discoideum GN=cdk1 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.308e-60
Identity = 121/209 (57.89%), Postives = 156/209 (74.64%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            +  ++KLEK+GEGTYGKVY+A+EKATG++VALKK RL  +D+GVP T LRE+S+L+ +   P+VV L DV   QN+     LYLVFEY+D DLKKY+ S       +    +KS +YQL KG+A+ HGH ILHRDLKP NLL+DR+   LK+AD GLARA ++P++ YTHEI+TLWYRAPEVLLGS  YS   DMWSV CIF E++ ++
Sbjct:    7 LSRYQKLEKLGEGTYGKVYKAKEKATGRMVALKKIRL--EDDGVPSTALREISLLKEVPH-PNVVSLFDVLHCQNR-----LYLVFEYLDQDLKKYMDSVPALCPQL----IKSYLYQLLKGLAYSHGHRILHRDLKPQNLLIDRQG-ALKLADFGLARAVSIPVRVYTHEIVTLWYRAPEVLLGSKSYSVPVDMWSVGCIFGEMLNKK 202          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK5_DICDI (Cell division protein kinase 5 homolog OS=Dictyostelium discoideum GN=cdk5 PE=2 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 1.709e-60
Identity = 117/207 (56.52%), Postives = 154/207 (74.40%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVT 631
            M+ + K+EK+GEGTYG VY+A+ + TG+IVALK+ RL  +DEGVP T +RE+S+L+ L + P++VRL DV   + K     L LVFEY+D DLKKY+    + G  I   T+KS MYQL KGVAFCH H +LHRDLKP NLL++RK   LK+AD GLARAF +P++ Y+HE++TLWYRAP+VL+GS  YST  D+WS  CIFAE+ +
Sbjct:    1 MEKYSKIEKLGEGTYGIVYKAKNRETGEIVALKRIRLDSEDEGVPCTAIREISLLKEL-KHPNIVRLHDVIHTERK-----LTLVFEYLDQDLKKYLD---ECGGEISKPTIKSFMYQLLKGVAFCHDHRVLHRDLKPQNLLINRKG-ELKLADFGLARAFGIPVRTYSHEVVTLWYRAPDVLMGSRKYSTPIDIWSAGCIFAEMAS 197          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC21_MEDSA (Cell division control protein 2 homolog 1 (Fragment) OS=Medicago sativa GN=CDC2A PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.232e-60
Identity = 111/208 (53.37%), Postives = 153/208 (73.56%), Query Frame = 2
Query:   23 EKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQHFS 646
            E +EK+GEGTYG VY+AR++ T + +ALKK RL ++DEGVP T +RE+S+L+ +    ++VRL DV     +     LYLVFEY+D DLKK++ S  +  ++     VK  +YQ+  G+A+CH H +LHRDLKP NLL+DR+T +LK+AD GLARAF +P++ +THE++TLWYRAPE+LLGS HYST  D+WSV CIFAE+  R+  S
Sbjct:    2 ENVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHR-NIVRLQDVVHSDKR-----LYLVFEYLDLDLKKHMDSSPEFIKD--PRQVKMFLYQMLCGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDVWSVGCIFAEMANRRPLS 201          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2_SCHPO (Cell division control protein 2 OS=Schizosaccharomyces pombe GN=cdc2 PE=1 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 4.972e-60
Identity = 113/212 (53.30%), Postives = 156/212 (73.58%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRD---PHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGE-NIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTR 634
            M+ ++K+EK+GEGTYG VY+AR K +G+IVA+KK RL ++ EGVP T +RE+S+L+ ++ +    + VRL+D+   ++K     LYLVFE++D DLKKY+    +TG  ++    V+   YQL  GV FCH   I+HRDLKP NLL+D++   LK+AD GLAR+F +P++ YTHEI+TLWYRAPEVLLGS HYST  D+WSV CIFAE++ R
Sbjct:    1 MENYQKVEKIGEGTYGVVYKARHKLSGRIVAMKKIRLEDESEGVPSTAIREISLLKEVNDENNRSNCVRLLDILHAESK-----LYLVFEFLDMDLKKYMDRISETGATSLDPRLVQKFTYQLVNGVNFCHSRRIIHRDLKPQNLLIDKEG-NLKLADFGLARSFGVPLRNYTHEIVTLWYRAPEVLLGSRHYSTGVDIWSVGCIFAEMIRR 206          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK2_XENLA (Cell division protein kinase 2 OS=Xenopus laevis GN=cdk2 PE=1 SV=3)

HSP 1 Score: 230.335 bits (586), Expect = 6.494e-60
Identity = 113/209 (54.07%), Postives = 159/209 (76.08%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            M+ F+K+EK+GEGTYG VY+AR + TG+IVALKK RL  + EGVP T +RE+S+L+ L+  P++V+L+DV   +NK     LYLVFE+++ DLKK++     +G  I +  VKS ++QL +G+AFCH H +LHRDLKP NLL++     +K+AD GLARAF +P++ +THE++TLWYRAPE+LLG   YSTA D+WS+ CIFAE++TR+
Sbjct:    1 MENFQKVEKIGEGTYGVVYKARNRETGEIVALKKIRLDTETEGVPSTAIREISLLKELNH-PNIVKLLDVIHTENK-----LYLVFEFLNQDLKKFMDGSNISG--ISLALVKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINSDG-AIKLADFGLARAFGVPVRTFTHEVVTLWYRAPEILLGCKFYSTAVDIWSLGCIFAEMITRR 200          
The following BLAST results are available for this feature:
BLAST of FC921677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK2_MESAU9.061e-6255.02Cell division protein kinase 2 OS=Mesocricetus aur... [more]
CDC22_MEDSA1.183e-6152.15Cell division control protein 2 homolog 2 OS=Medic... [more]
CDK2_CARAU2.019e-6154.55Cell division protein kinase 2 OS=Carassius auratu... [more]
CDKA2_ORYSJ3.443e-6152.63Cyclin-dependent kinase A-2 OS=Oryza sativa subsp.... [more]
CDK2_MOUSE5.873e-6154.72Cell division protein kinase 2 OS=Mus musculus GN=... [more]
CDC2_DICDI1.308e-6057.89Cell division control protein 2 homolog OS=Dictyos... [more]
CDK5_DICDI1.709e-6056.52Cell division protein kinase 5 homolog OS=Dictyost... [more]
CDC21_MEDSA2.232e-6053.37Cell division control protein 2 homolog 1 (Fragmen... [more]
CDC2_SCHPO4.972e-6053.30Cell division control protein 2 OS=Schizosaccharom... [more]
CDK2_XENLA6.494e-6054.07Cell division protein kinase 2 OS=Xenopus laevis G... [more]

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Properties
Property NameValue
Genbank descriptionC32108A10EF RVDevelopN Citrus clementina cDNA clone C32108A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921677 ID=FC921677; Name=FC921677; organism=Citrus clementina; type=EST; length=646bp
AAGAATGGTGATGGACGCATTTGAGAAGCTAGAGAAAGTAGGAGAAGGGA
CGTACGGGAAAGTATACAGAGCAAGAGAGAAGGCAACTGGGAAGATCGTT
GCTCTCAAGAAGACTCGTCTCCACGAGGACGATGAAGGCGTACCCCCAAC
CACTCTCCGGGAGGTCTCCATCTTGCGCATGCTCTCTCGCGATCCCCATG
TTGTTAGGTTGATGGATGTCAAACAAGGCCAGAACAAGGAAGGCAGGACG
GTGCTCTACCTTGTTTTTGAGTACATGGACACTGATCTGAAGAAGTACAT
CCGAAGCTTCCGCCAAACTGGAGAGAACATTCCTGTTAACACTGTCAAGA
GCTTAATGTACCAACTTTGCAAGGGTGTTGCTTTCTGCCATGGACATGGA
ATCCTTCATAGGGACCTTAAGCCTCACAATCTGTTGATGGACCGAAAGAC
TATGACACTTAAGATAGCAGATCTTGGTTTAGCTCGAGCATTTACTCTTC
CAATTAAGAAATATACTCATGAGATATTGACCCTCTGGTATAGGGCTCCG
GAAGTCCTTTTGGGGTCCACCCATTACTCAACTGCAGGTGATATGTGGTC
TGTTGCCTGTATATTTGCGGAACTGGTTACAAGACAGCACTTTTCC
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