FC921677

Overview
NameFC921677
Unique NameFC921677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length646
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CSK2A_DROME (Casein kinase II subunit alpha OS=Drosophila melanogaster GN=CkIIalpha PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.121e-19
Identity = 60/214 (28.04%), Postives = 114/214 (53.27%), Query Frame = 2
Query:   14 DAFEKLEKVGEGTYGKVYRA-----REKATGKIVA-LKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            D ++ + K+G G Y +V+ A      EK   KI+  +KK ++            RE+ IL  L    +++ L+ V +  +   RT   L+FE+++         F+Q  + +    ++  +++L K + +CH  GI+HRD+KPHN+++D +   L++ D GLA  F  P ++Y   + + +++ PE+L+    Y  + DMWS+ C+ A ++ R+
Sbjct:   35 DDYQLVRKLGRGKYSEVFEAINITTTEKCVVKILKPVKKKKIK-----------REIKILENLRGGTNIITLLAVVK--DPVSRTPA-LIFEHVNNT------DFKQLYQTLTDYEIRYYLFELLKALDYCHSMGIMHRDVKPHNVMIDHENRKLRLIDWGLAE-FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 227          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: YL673_MIMIV (Putative serine/threonine-protein kinase L673 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_L673 PE=3 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.464e-19
Identity = 65/201 (32.34%), Postives = 106/201 (52.74%), Query Frame = 2
Query:   35 KVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPI--KKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVT 631
            K+G GTYG VY+         +A+KK R ++    +    +REV+ L +LS  P+++   +++     +  + +Y+  + MDT L  Y+     T  NI  +     + QL + + + H  GI+HRDL   N+L+  K  TLKI D G AR F+      KYT  + ++ YRA E+L+G   Y+   D+WS  C+  E++T
Sbjct:  269 KLGSGTYGSVYKITYDDNQ--IAMKKIR-NKSTFVIDSNMIREVNNLMILSGHPNII---NIEGYYYWDLTSTMYIGLDLMDTSLAIYL-----TKNNISESLKIKYVLQLLEAINYMHSKGIMHRDLSASNILI--KGSTLKIGDFGSARFFSGDTLDTKYTRNVCSINYRAMELLMGIFPYNNKIDIWSCGCLITEILT 456          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: STK36_MOUSE (Serine/threonine-protein kinase 36 OS=Mus musculus GN=Stk36 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.464e-19
Identity = 65/205 (31.71%), Postives = 107/205 (52.20%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAEL 625
            M+ +  LE +GEG++G+VY+ R+K + ++VALK        E       RE+ I+R L   P++V ++D     + E    + +V +Y + +L + +    +    +P + V+++  QL   + + H H ILHRD+KP N+L+  K   +K+ D G ARA +      T    T  Y +PE L+    Y    D+WSV CI  EL
Sbjct:    1 MEKYHVLEMIGEGSFGRVYKGRKKYSAQVVALKFIPKLGRSEKELRNLQREIEIMRGLWH-PNIVHMLD-----SFETDKEVVVVTDYAEGELFQIL----EDDGKLPEDQVQAIAAQLVSALYYLHSHRILHRDMKPQNILL-AKGGGIKLCDFGFARAMSTNTMVLTSIKGTPLYMSPE-LVEERPYDHTADLWSVGCILYEL 193          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: PMK3_CAEEL (Mitogen-activated protein kinase pmk-3 OS=Caenorhabditis elegans GN=pmk-3 PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.464e-19
Identity = 61/206 (29.61%), Postives = 103/206 (50.00%), Query Frame = 2
Query:   29 LEKVGEGTYGKVYRAR---EKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNT-VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGS-THYSTAGDMWSVACIFAELVT 631
            +E +G G++G V +          + VA+KK R    D        RE  +L+++  D +++  +D+     +     +Y+V E+    L + ++  R  G  +  +  +K ++YQ+ + + + H   I+HRDLKP NL +   +  L I D GLAR+        T  + T WYR+PEV+      Y+   DMWS+ CI AEL+T
Sbjct:  121 IEYLGGGSFGNVIKTSAVCRDGLRRYVAIKKMREPFFDPHHARRIFRETKLLQLMRHD-NIICALDIYTPDEENDFRDVYVVTEFAGRSLYQILKQQRDYGRRVLTDEHIKFIIYQIIRALKYIHSANIIHRDLKPGNLALTDDS-DLMILDFGLARSLEKKDTSLTQYVQTRWYRSPEVIYWKIDSYTNLADMWSLGCIAAELLT 324          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: MK10_MOUSE (Mitogen-activated protein kinase 10 OS=Mus musculus GN=Mapk10 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.464e-19
Identity = 67/208 (32.21%), Postives = 108/208 (51.92%), Query Frame = 2
Query:    8 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELV 628
            V+  ++ L+ +G G  G V  A +    + VA+KK      ++       RE+ +++ ++   +++ L++V   Q   E    +YLV E MD +L + I+        +    +  L+YQ+  G+   H  GI+HRDLKP N+++ +   TLKI D GLAR         T  ++T +YRAPEV+LG   Y    D+WSV CI  E+V
Sbjct:   60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMV 257          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: MK10_HUMAN (Mitogen-activated protein kinase 10 OS=Homo sapiens GN=MAPK10 PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.464e-19
Identity = 67/208 (32.21%), Postives = 108/208 (51.92%), Query Frame = 2
Query:    8 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELV 628
            V+  ++ L+ +G G  G V  A +    + VA+KK      ++       RE+ +++ ++   +++ L++V   Q   E    +YLV E MD +L + I+        +    +  L+YQ+  G+   H  GI+HRDLKP N+++ +   TLKI D GLAR         T  ++T +YRAPEV+LG   Y    D+WSV CI  E+V
Sbjct:   60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK-NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAGTSF-MMTPYVVTRYYRAPEVILG-MGYKENVDIWSVGCIMGEMV 257          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: MK08A_CYPCA (Mitogen-activated protein kinase 8A OS=Cyprinus carpio GN=mapk8a PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 1.464e-19
Identity = 67/208 (32.21%), Postives = 109/208 (52.40%), Query Frame = 2
Query:    8 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELV 628
            V+  ++ L  +G G  G V  A +    + VA+KK      ++       RE+ +++ ++   +++ L++V   Q   +    +YLV E MD +L + I+        +    +  L+YQ+  G+   H  GI+HRDLKP N+++ +   TLKI D GLAR     +   T  ++T +YRAPEV+LG   Y    D+WSV CI AE+V
Sbjct:   22 VLKRYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKYVNHK-NIICLLNVFTSQKTLDEFQDVYLVMELMDANLCQVIQM------ELDHERLSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAATGL-LMTPYVVTRYYRAPEVILG-MGYQANVDIWSVGCILAEMV 219          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: MK08B_CYPCA (Mitogen-activated protein kinase 8B OS=Cyprinus carpio GN=mapk8b PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.911e-19
Identity = 68/208 (32.69%), Postives = 108/208 (51.92%), Query Frame = 2
Query:    8 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNK-EGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELV 628
            V+  ++ L  +G G  G V  A +    + VA+KK      ++       RE+ +++ ++   +++ L++V   Q   E    +YLV E MD +L + I+        +    +  L+YQ+  G    H  GI+HRDLKP N+++ +   TLKI D GLAR     +   T  ++T +YRAPEV+LG   Y    D+WSV CI AE+V
Sbjct:   22 VLKRYQNLRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHK-NIIGLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM------ELDHERLSYLLYQMLCGTKHLHSAGIIHRDLKPSNIVV-KSDCTLKILDFGLARTAATGL-LMTPYVVTRYYRAPEVILG-MGYQANVDVWSVGCIMAEMV 219          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: MCK1_YEAST (Protein kinase MCK1 OS=Saccharomyces cerevisiae GN=MCK1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.911e-19
Identity = 62/213 (29.11%), Postives = 109/213 (51.17%), Query Frame = 2
Query:    2 RMVMDAFEKLEKVGEGTYGKVYRAREKATGK-IVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVL-YLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAF--TLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELV 628
            RM++  + K+ +   GT  + Y  ++K       A+KK   H + +       RE+ ILR+    P++V+L       + +   V  +L  E +   L+  I  +      +P+  ++   YQ+ +G+ + HG G+ HRD+KP N+L+D +T  LKI D G A+      P   Y   I + +YRAPE+++G T Y+T  D+W + C+  E++
Sbjct:   32 RMLVKEYRKIGRGAFGTVVQAYLTQDKKNWLGPFAIKKVPAHTEYKS------RELQILRIADH-PNIVKLQYFFTHLSPQDNKVYQHLAMECLPETLQIEINRYVTNKLEMPLKHIRLYTYQIARGMLYLHGLGVCHRDIKPSNVLVDPETGVLKICDFGSAKKLEHNQPSISY---ICSRFYRAPELIIGCTQYTTQIDIWGLGCVMGEML 234          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: SNF1_CANGA (Carbon catabolite-derepressing protein kinase OS=Candida glabrata GN=SNF1 PE=3 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 2.496e-19
Identity = 70/210 (33.33%), Postives = 108/210 (51.43%), Query Frame = 2
Query:   20 FEKLEKVGEGTYGKVYRAREKATGKIVALK----KTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            ++ ++ +GEG++GKV  A    TG+ VALK    K     D +G      RE+S LR+L R PH+++L DV + +++     + +V EY   +L  YI    +  E       +    Q+   V +CH H I+HRDLKP NLL+D + + +KIAD GL+   T      T    +  Y APEV+ G  +     D+WS   I   ++ R+
Sbjct:   39 YQIVKTLGEGSFGKVKLAYHVTTGQKVALKIINKKVLAKSDMQG---RIEREISYLRLL-RHPHIIKLYDVIKSKDE-----IIMVIEYAGNELFDYIVQRNKMSEQ----EARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD-EHLNVKIADFGLSNIMTDGNFLKT-SCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRR 233          
The following BLAST results are available for this feature:
BLAST of FC921677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CSK2A_DROME1.121e-1928.04Casein kinase II subunit alpha OS=Drosophila melan... [more]
YL673_MIMIV1.464e-1932.34Putative serine/threonine-protein kinase L673 OS=A... [more]
STK36_MOUSE1.464e-1931.71Serine/threonine-protein kinase 36 OS=Mus musculus... [more]
PMK3_CAEEL1.464e-1929.61Mitogen-activated protein kinase pmk-3 OS=Caenorha... [more]
MK10_MOUSE1.464e-1932.21Mitogen-activated protein kinase 10 OS=Mus musculu... [more]
MK10_HUMAN1.464e-1932.21Mitogen-activated protein kinase 10 OS=Homo sapien... [more]
MK08A_CYPCA1.464e-1932.21Mitogen-activated protein kinase 8A OS=Cyprinus ca... [more]
MK08B_CYPCA1.911e-1932.69Mitogen-activated protein kinase 8B OS=Cyprinus ca... [more]
MCK1_YEAST1.911e-1929.11Protein kinase MCK1 OS=Saccharomyces cerevisiae GN... [more]
SNF1_CANGA2.496e-1933.33Carbon catabolite-derepressing protein kinase OS=C... [more]

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Properties
Property NameValue
Genbank descriptionC32108A10EF RVDevelopN Citrus clementina cDNA clone C32108A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921677 ID=FC921677; Name=FC921677; organism=Citrus clementina; type=EST; length=646bp
AAGAATGGTGATGGACGCATTTGAGAAGCTAGAGAAAGTAGGAGAAGGGA
CGTACGGGAAAGTATACAGAGCAAGAGAGAAGGCAACTGGGAAGATCGTT
GCTCTCAAGAAGACTCGTCTCCACGAGGACGATGAAGGCGTACCCCCAAC
CACTCTCCGGGAGGTCTCCATCTTGCGCATGCTCTCTCGCGATCCCCATG
TTGTTAGGTTGATGGATGTCAAACAAGGCCAGAACAAGGAAGGCAGGACG
GTGCTCTACCTTGTTTTTGAGTACATGGACACTGATCTGAAGAAGTACAT
CCGAAGCTTCCGCCAAACTGGAGAGAACATTCCTGTTAACACTGTCAAGA
GCTTAATGTACCAACTTTGCAAGGGTGTTGCTTTCTGCCATGGACATGGA
ATCCTTCATAGGGACCTTAAGCCTCACAATCTGTTGATGGACCGAAAGAC
TATGACACTTAAGATAGCAGATCTTGGTTTAGCTCGAGCATTTACTCTTC
CAATTAAGAAATATACTCATGAGATATTGACCCTCTGGTATAGGGCTCCG
GAAGTCCTTTTGGGGTCCACCCATTACTCAACTGCAGGTGATATGTGGTC
TGTTGCCTGTATATTTGCGGAACTGGTTACAAGACAGCACTTTTCC
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