FC921677

Overview
NameFC921677
Unique NameFC921677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length646
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.267e-55
Identity = 113/202 (55.94%), Postives = 147/202 (72.77%), Query Frame = 2
Query:   20 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAEL 625
            +++LEK+GEG+YG VYRAR+  T  IVALK+ RL   +EGVP T +RE+SIL+ L R  ++VRL+DV   +N+     L LVFEYM+ DLKKY+   R +G N+   T++  M  L KGV FCH   +LHRDLKP NLL+ R+   LK+AD GL RAF +P+KKYTHE++TLWYR+P+VLLGST Y T  D+WSV CIFAE+
Sbjct:    5 YQRLEKIGEGSYGVVYRARDITTDVIVALKRIRLESVEEGVPCTAIREISILKEL-RHENIVRLLDVCHSENR-----LNLVFEYMEMDLKKYMD--RASG-NLDPATIQEFMRSLLKGVRFCHERNVLHRDLKPPNLLISREK-ELKLADFGLGRAFGIPVKKYTHEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEM 196          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2_EMENI (Cell division control protein 2 OS=Emericella nidulans GN=nimX PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.162e-55
Identity = 112/226 (49.56%), Postives = 153/226 (67.70%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKA-TGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQT----GENIPVNT------------VKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            M+ ++K+EK+GEGTYG VY+ARE     +IVALKK RL  +DEGVP T +RE+S+L+ ++ DP++VRL+++      +    LYLVFE++D DLKKY+ +   +    G  +P  +            VK  M QL +G+ FCH H +LHRDLKP NLL+DR    LK+AD GLARAF +P++ YTHE++TLWYR+PE+LLG   YST  DMWS   IFAE+ TR+
Sbjct:    1 MENYQKIEKIGEGTYGVVYKARELTHPNRIVALKKIRLEAEDEGVPSTAIREISLLKEMN-DPNIVRLLNIVHADGHK----LYLVFEFLDLDLKKYMEALPVSEGGRGRALPDGSTLSRNLGLGDAMVKKFMAQLIEGIRFCHSHRVLHRDLKPQNLLIDRDG-NLKLADFGLARAFGVPLRTYTHEVVTLWYRSPEILLGGRQYSTGVDMWSCGAIFAEMCTRK 220          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2H_THEPA (Cell division control protein 2 homolog OS=Theileria parva GN=CRK2 PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 8.214e-55
Identity = 107/206 (51.94%), Postives = 148/206 (71.84%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELV 628
            M  + K+EK+GEGTYG VY+A+    G+I ALKK R+ E+DEG+P T +RE+S+L+ L   P++V L DV   +       L LVFEY+D DLKK + +       +   T KS +YQ+ +G+++CH H ILHRDLKP NLL++R+ + LK+AD GLARAF +P++ YTHE++TLWYRAP+VL+GS  YSTA D+WSV CIFAE++
Sbjct:    1 MRRYHKMEKIGEGTYGVVYKAQNNH-GEICALKKIRVEEEDEGIPSTAIREISLLKELHH-PNIVWLRDVIHSEK-----CLTLVFEYLDQDLKKLLDA---CDGGLEPTTAKSFLYQILRGISYCHDHRILHRDLKPQNLLINREGV-LKLADFGLARAFAIPVRSYTHEVVTLWYRAPDVLMGSKKYSTAVDIWSVGCIFAEMI 195          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2H_THEAN (Cell division control protein 2 homolog OS=Theileria annulata GN=CRK2 PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 8.214e-55
Identity = 107/206 (51.94%), Postives = 148/206 (71.84%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELV 628
            M  + K+EK+GEGTYG VY+A+    G+I ALKK R+ E+DEG+P T +RE+S+L+ L   P++V L DV   +       L LVFEY+D DLKK + +       +   T KS +YQ+ +G+++CH H ILHRDLKP NLL++R+ + LK+AD GLARAF +P++ YTHE++TLWYRAP+VL+GS  YSTA D+WSV CIFAE++
Sbjct:    1 MRRYHKMEKIGEGTYGVVYKAQNNH-GEICALKKIRVEEEDEGIPSTAIREISLLKELHH-PNIVWLRDVIHSEK-----CLTLVFEYLDQDLKKLLDA---CDGGLEPTTAKSFLYQILRGISYCHDHRILHRDLKPQNLLINREGV-LKLADFGLARAFAIPVRSYTHEVVTLWYRAPDVLMGSKKYSTAVDIWSVGCIFAEMI 195          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2_CAEBR (Cell division control protein 2 homolog OS=Caenorhabditis briggsae GN=cdk-1 PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.401e-54
Identity = 104/209 (49.76%), Postives = 147/209 (70.33%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            +D F KLEK+GEGTYG VY+ R + T  +VA+KK RL  +DEGVP T +RE+S+L+ L   P+VV L  V   +N+     LYL+FE++  DLK+Y+ +  +  E +P  T+KS  +Q+ + + FCH   ++HRDLKP NLL+D K   +K+AD GLARA  +PI+ YTHE++TLWYRAPE+L+G+  YS   DMWS+ CIFAE+ T++
Sbjct:   13 LDDFTKLEKIGEGTYGVVYKGRNRRTQAMVAMKKIRLESEDEGVPSTAVREISLLKELQH-PNVVGLEAVIMQENR-----LYLIFEFLSYDLKRYMDTLSKE-EYLPSETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDEKG-AIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKK 213          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2B_ANTMA (Cell division control protein 2 homolog B (Fragment) OS=Antirrhinum majus GN=CDC2B PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.390e-54
Identity = 102/195 (52.31%), Postives = 145/195 (74.36%), Query Frame = 2
Query:   53 YGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            YG VY+AR+  T + +ALKK RL ++DEGVP T +RE+S+L+ +  + ++V L DV   + +     LYLVFEY+D DLKK++ S  +  +++  + VK  + Q+ +GVA+CH H +LHRDLKP NLL+DR + T+K+AD GLARAF +P++ +THE++TLWYRAPEVLLGS HYST  D+WSV CIFAE+V ++
Sbjct:    2 YGVVYKARDIETNEDIALKKIRLEQEDEGVPSTAIREISLLKEMHHE-NIVNLKDVVHREKR-----LYLVFEYLDLDLKKHMDSCPEFSQDL--HMVKMFLCQILRGVAYCHSHRVLHRDLKPQNLLIDRGSNTIKLADFGLARAFGIPVRTFTHEVVTLWYRAPEVLLGSRHYSTPVDVWSVGCIFAEMVNQK 188          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK5_XENLA (Cell division protein kinase 5 OS=Xenopus laevis GN=cdk5 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.121e-54
Identity = 110/205 (53.66%), Postives = 143/205 (69.76%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAEL 625
            M  +EKLEK+GEGTYG V++A+ + T +IVALK+ RL +DDEGVP + LRE+ +L+ L +  ++VRL DV     K     L LVFE+ D DLKKY   F     ++    VKS MYQL KG+AFCH   +LHRDLKP NLL++R    LK+AD GLARAF +P++ Y+ E++TLWYR P+VL G+  YST+ DMWS  CIFAEL
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRDTHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLKKY---FDSCNGDLDPEIVKSFMYQLLKGLAFCHSRNVLHRDLKPQNLLINRNG-ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2C_DROME (Cell division control protein 2 cognate OS=Drosophila melanogaster GN=cdc2c PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 9.082e-54
Identity = 105/210 (50.00%), Postives = 147/210 (70.00%), Query Frame = 2
Query:    8 VMDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            ++D F++ EK+GEGTYG VY+AR  +TG+ VALKK RL  + EGVP T +RE+S+L+ L + P+VV+L DV    N      LY++FEY++ DLKK +   +          +KS M+Q+   V FCH + ILHRDLKP NLL+D     +K+AD GLARAF +P++ YTHE++TLWYRAPE+LLG+  YST  D+WS+ CIF+E++ R+
Sbjct:    4 ILDNFQRAEKIGEGTYGIVYKARSNSTGQDVALKKIRLEGETEGVPSTAIREISLLKNL-KHPNVVQLFDVVISGNN-----LYMIFEYLNMDLKKLMDKKKDV---FTPQLIKSYMHQILDAVGFCHTNRILHRDLKPQNLLVDTAGK-IKLADFGLARAFNVPMRAYTHEVVTLWYRAPEILLGTKFYSTGVDIWSLGCIFSEMIMRR 203          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK5_GLOMM (Cell division protein kinase 5 homolog OS=Glossina morsitans morsitans GN=Cdk5 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.186e-53
Identity = 109/205 (53.17%), Postives = 143/205 (69.76%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAEL 625
            M  +EKLEK+GEGTYG V++ R + T +IVALK+ RL EDDEGVP + LRE+ +L+ L +  ++VRL DV   + K     L LVFE+ D DLKKY   F     +I +   +S M QL +G+AFCH H +LHRDLKP NLL++ K   LK+AD GLARAF +P+K Y+ E++TLWYR P+VL G+  Y+T+ DMWS  CIFAEL
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKGRNRETLEIVALKRVRLDEDDEGVPSSALREICLLKEL-KHKNIVRLYDVLHSEKK-----LTLVFEHCDQDLKKY---FDSLNGDIDMAVCRSFMLQLLRGLAFCHSHNVLHRDLKPQNLLIN-KNGELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAEL 195          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK5_RAT (Cell division protein kinase 5 OS=Rattus norvegicus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.549e-53
Identity = 108/205 (52.68%), Postives = 143/205 (69.76%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAEL 625
            M  +EKLEK+GEGTYG V++A+ + T +IVALK+ RL +DDEGVP + LRE+ +L+ L +  ++VRL DV     K     L LVFE+ D DLKKY   F     ++    VKSL++QL KG+ FCH   +LHRDLKP NLL++R    LK+AD GLARAF +P++ Y+ E++TLWYR P+VL G+  YST+ DMWS  CIFAEL
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLKKY---FDSCNGDLDPEIVKSLLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195          
The following BLAST results are available for this feature:
BLAST of FC921677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CC2H1_TRYCO1.267e-5555.94Cell division control protein 2 homolog 1 OS=Trypa... [more]
CDC2_EMENI2.162e-5549.56Cell division control protein 2 OS=Emericella nidu... [more]
CDC2H_THEPA8.214e-5551.94Cell division control protein 2 homolog OS=Theiler... [more]
CDC2H_THEAN8.214e-5551.94Cell division control protein 2 homolog OS=Theiler... [more]
CDC2_CAEBR1.401e-5449.76Cell division control protein 2 homolog OS=Caenorh... [more]
CDC2B_ANTMA2.390e-5452.31Cell division control protein 2 homolog B (Fragmen... [more]
CDK5_XENLA3.121e-5453.66Cell division protein kinase 5 OS=Xenopus laevis G... [more]
CDC2C_DROME9.082e-5450.00Cell division control protein 2 cognate OS=Drosoph... [more]
CDK5_GLOMM1.186e-5353.17Cell division protein kinase 5 homolog OS=Glossina... [more]
CDK5_RAT1.549e-5352.68Cell division protein kinase 5 OS=Rattus norvegicu... [more]

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Properties
Property NameValue
Genbank descriptionC32108A10EF RVDevelopN Citrus clementina cDNA clone C32108A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921677 ID=FC921677; Name=FC921677; organism=Citrus clementina; type=EST; length=646bp
AAGAATGGTGATGGACGCATTTGAGAAGCTAGAGAAAGTAGGAGAAGGGA
CGTACGGGAAAGTATACAGAGCAAGAGAGAAGGCAACTGGGAAGATCGTT
GCTCTCAAGAAGACTCGTCTCCACGAGGACGATGAAGGCGTACCCCCAAC
CACTCTCCGGGAGGTCTCCATCTTGCGCATGCTCTCTCGCGATCCCCATG
TTGTTAGGTTGATGGATGTCAAACAAGGCCAGAACAAGGAAGGCAGGACG
GTGCTCTACCTTGTTTTTGAGTACATGGACACTGATCTGAAGAAGTACAT
CCGAAGCTTCCGCCAAACTGGAGAGAACATTCCTGTTAACACTGTCAAGA
GCTTAATGTACCAACTTTGCAAGGGTGTTGCTTTCTGCCATGGACATGGA
ATCCTTCATAGGGACCTTAAGCCTCACAATCTGTTGATGGACCGAAAGAC
TATGACACTTAAGATAGCAGATCTTGGTTTAGCTCGAGCATTTACTCTTC
CAATTAAGAAATATACTCATGAGATATTGACCCTCTGGTATAGGGCTCCG
GAAGTCCTTTTGGGGTCCACCCATTACTCAACTGCAGGTGATATGTGGTC
TGTTGCCTGTATATTTGCGGAACTGGTTACAAGACAGCACTTTTCC
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