FC921677

Overview
NameFC921677
Unique NameFC921677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length646
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYBB (Cell division control protein 2 homolog 1 OS=Trypanosoma brucei brucei GN=CRK1 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 3.451e-53
Identity = 105/202 (51.98%), Postives = 144/202 (71.29%), Query Frame = 2
Query:   20 FEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAEL 625
            +E+L+K+GEG+YG V+RAR+  TG IVA+K+ RL +++EGVP T +RE+SIL+ L R  ++VRL+DV   + +     L LVFE M+ DLKKY+      G ++   T++  M  L  GV FCH   +LHRDLKP NLL+ R+   LK+AD GL RAF +P+KK+T E++TLWYR+P+VLLGST Y T  D+WSV CIFAE+
Sbjct:    5 YERLQKIGEGSYGVVFRARDVTTGTIVAVKRIRLEKEEEGVPCTAIREISILKEL-RHENIVRLLDVCHSEKR-----LTLVFECMEMDLKKYMD---HVGGDLDAGTIQEFMRSLLSGVRFCHERNVLHRDLKPPNLLISREK-ELKLADFGLGRAFGIPVKKFTQEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEM 196          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK5_MOUSE (Cell division protein kinase 5 OS=Mus musculus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 4.507e-53
Identity = 107/205 (52.20%), Postives = 142/205 (69.27%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAEL 625
            M  +EKLEK+GEGTYG V++A+ + T +IVALK+ RL +DDEGVP + LRE+ +L+ L +  ++VRL DV     K     L LVFE+ D DLKKY   F     ++    VKS ++QL KG+ FCH   +LHRDLKP NLL++R    LK+AD GLARAF +P++ Y+ E++TLWYR P+VL G+  YST+ DMWS  CIFAEL
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLKKY---FDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK5_HUMAN (Cell division protein kinase 5 OS=Homo sapiens GN=CDK5 PE=1 SV=3)

HSP 1 Score: 207.608 bits (527), Expect = 4.507e-53
Identity = 107/205 (52.20%), Postives = 142/205 (69.27%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAEL 625
            M  +EKLEK+GEGTYG V++A+ + T +IVALK+ RL +DDEGVP + LRE+ +L+ L +  ++VRL DV     K     L LVFE+ D DLKKY   F     ++    VKS ++QL KG+ FCH   +LHRDLKP NLL++R    LK+AD GLARAF +P++ Y+ E++TLWYR P+VL G+  YST+ DMWS  CIFAEL
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLKKY---FDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK5_BOVIN (Cell division protein kinase 5 OS=Bos taurus GN=CDK5 PE=1 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 4.507e-53
Identity = 107/205 (52.20%), Postives = 142/205 (69.27%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAEL 625
            M  +EKLEK+GEGTYG V++A+ + T +IVALK+ RL +DDEGVP + LRE+ +L+ L +  ++VRL DV     K     L LVFE+ D DLKKY   F     ++    VKS ++QL KG+ FCH   +LHRDLKP NLL++R    LK+AD GLARAF +P++ Y+ E++TLWYR P+VL G+  YST+ DMWS  CIFAEL
Sbjct:    1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKEL-KHKNIVRLHDVLHSDKK-----LTLVFEFCDQDLKKY---FDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNG-ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2_CAEEL (Cell division control protein 2 homolog OS=Caenorhabditis elegans GN=cdk-1 PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 5.887e-53
Identity = 100/209 (47.85%), Postives = 146/209 (69.86%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            ++ F KLEK+GEGTYG VY+ + + T  +VA+KK RL  +DEGVP T +RE+S+L+ L   P+VV L  V   +N+     L+L+FE++  DLK+Y+    +  E +P+ T+KS  +Q+ + + FCH   ++HRDLKP NLL+D     +K+AD GLARA  +PI+ YTHE++TLWYRAPE+L+G+  YS   DMWS+ CIFAE+ T++
Sbjct:   19 LNDFTKLEKIGEGTYGVVYKGKNRRTNAMVAMKKIRLESEDEGVPSTAVREISLLKELQH-PNVVGLEAVIMQENR-----LFLIFEFLSFDLKRYMDQLGKD-EYLPLETLKSYTFQILQAMCFCHQRRVIHRDLKPQNLLVDNNG-AIKLADFGLARAIGIPIRVYTHEVVTLWYRAPEILMGAQRYSMGVDMWSIGCIFAEMATKK 219          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAVI (Cell division control protein 2 homolog OS=Plasmodium vivax GN=CRK2 PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 7.689e-53
Identity = 108/206 (52.43%), Postives = 146/206 (70.87%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELV 628
            M+ +  LEK+GEGTYG VY+A+    G+  ALKK RL ++DEG+P T +RE+SIL+ L    ++V+L DV   + +     L LVFE++D DLKK +       E++   T KS + QL  G+A+CH H +LHRDLKP NLL++R+   LKIAD GLARAF +P++KYTHE++TLWYRAP++L+GS  YST  DMWSV CIFAE+V
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTAIREISILKELKHS-NIVKLYDVIHTKKR-----LILVFEHLDQDLKKLLDVCDGGLESV---TAKSFLLQLLSGIAYCHEHRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDILMGSKKYSTPIDMWSVGCIFAEMV 195          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAFK (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CRK2 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.311e-52
Identity = 108/206 (52.43%), Postives = 146/206 (70.87%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELV 628
            M+ +  LEK+GEGTYG VY+A+    G+  ALKK RL ++DEG+P TT+RE+SIL+ L    ++V+L DV   + +     L LVFE++D DLKK +       E++   T KS + QL  G+A+CH   +LHRDLKP NLL++R+   LKIAD GLARAF +P++KYTHE++TLWYRAP+VL+GS  YST  D+WSV CIFAE+V
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHS-NIVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAF7 (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate 3D7) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.311e-52
Identity = 108/206 (52.43%), Postives = 146/206 (70.87%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELV 628
            M+ +  LEK+GEGTYG VY+A+    G+  ALKK RL ++DEG+P TT+RE+SIL+ L    ++V+L DV   + +     L LVFE++D DLKK +       E++   T KS + QL  G+A+CH   +LHRDLKP NLL++R+   LKIAD GLARAF +P++KYTHE++TLWYRAP+VL+GS  YST  D+WSV CIFAE+V
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHS-NIVKLYDVIHTKKR-----LVLVFEHLDQDLKKLLDVCEGGLESV---TAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV 195          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2H_PLACH (Cell division control protein 2 homolog OS=Plasmodium chabaudi GN=CRK2 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.311e-52
Identity = 108/206 (52.43%), Postives = 147/206 (71.36%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELV 628
            M+ +  LEK+GEGTYG VY+A + + G+  ALKK RL ++DEG+P T +RE+SIL+ L R  ++V+L DV   + +     L LVFE++D DLKK I       E++   T KS + QL  G+A+CH H +LHRDLKP NLL++R+   LKIAD GLARAF +P ++YTHE++TLWYRAP++L+GS  YST  D+WSV CIFAE+V
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKA-QNSDGESFALKKIRLEKEDEGIPSTAIREISILKEL-RHSNIVKLYDVIHAKKR-----LILVFEHLDQDLKKLIDVCDGGLESV---TAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMV 195          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDC2H_PLABA (Cell division control protein 2 homolog OS=Plasmodium berghei (strain Anka) GN=CRK2 PE=2 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.311e-52
Identity = 108/206 (52.43%), Postives = 147/206 (71.36%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELV 628
            M+ +  LEK+GEGTYG VY+A + + G+  ALKK RL ++DEG+P T +RE+SIL+ L R  ++V+L DV   + +     L LVFE++D DLKK I       E++   T KS + QL  G+A+CH H +LHRDLKP NLL++R+   LKIAD GLARAF +P ++YTHE++TLWYRAP++L+GS  YST  D+WSV CIFAE+V
Sbjct:    1 MEKYHGLEKIGEGTYGVVYKA-QNSDGESFALKKIRLEKEDEGIPSTAIREISILKEL-RHSNIVKLYDVIHAKKR-----LILVFEHLDQDLKKLIDVCDGGLESV---TAKSFLLQLLNGIAYCHEHRVLHRDLKPQNLLINREG-ELKIADFGLARAFGIPARRYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMV 195          
The following BLAST results are available for this feature:
BLAST of FC921677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CC2H1_TRYBB3.451e-5351.98Cell division control protein 2 homolog 1 OS=Trypa... [more]
CDK5_MOUSE4.507e-5352.20Cell division protein kinase 5 OS=Mus musculus GN=... [more]
CDK5_HUMAN4.507e-5352.20Cell division protein kinase 5 OS=Homo sapiens GN=... [more]
CDK5_BOVIN4.507e-5352.20Cell division protein kinase 5 OS=Bos taurus GN=CD... [more]
CDC2_CAEEL5.887e-5347.85Cell division control protein 2 homolog OS=Caenorh... [more]
CDC2H_PLAVI7.689e-5352.43Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAFK1.311e-5252.43Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAF71.311e-5252.43Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLACH1.311e-5252.43Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLABA1.311e-5252.43Cell division control protein 2 homolog OS=Plasmod... [more]

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Properties
Property NameValue
Genbank descriptionC32108A10EF RVDevelopN Citrus clementina cDNA clone C32108A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921677 ID=FC921677; Name=FC921677; organism=Citrus clementina; type=EST; length=646bp
AAGAATGGTGATGGACGCATTTGAGAAGCTAGAGAAAGTAGGAGAAGGGA
CGTACGGGAAAGTATACAGAGCAAGAGAGAAGGCAACTGGGAAGATCGTT
GCTCTCAAGAAGACTCGTCTCCACGAGGACGATGAAGGCGTACCCCCAAC
CACTCTCCGGGAGGTCTCCATCTTGCGCATGCTCTCTCGCGATCCCCATG
TTGTTAGGTTGATGGATGTCAAACAAGGCCAGAACAAGGAAGGCAGGACG
GTGCTCTACCTTGTTTTTGAGTACATGGACACTGATCTGAAGAAGTACAT
CCGAAGCTTCCGCCAAACTGGAGAGAACATTCCTGTTAACACTGTCAAGA
GCTTAATGTACCAACTTTGCAAGGGTGTTGCTTTCTGCCATGGACATGGA
ATCCTTCATAGGGACCTTAAGCCTCACAATCTGTTGATGGACCGAAAGAC
TATGACACTTAAGATAGCAGATCTTGGTTTAGCTCGAGCATTTACTCTTC
CAATTAAGAAATATACTCATGAGATATTGACCCTCTGGTATAGGGCTCCG
GAAGTCCTTTTGGGGTCCACCCATTACTCAACTGCAGGTGATATGTGGTC
TGTTGCCTGTATATTTGCGGAACTGGTTACAAGACAGCACTTTTCC
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