FC921677

Overview
NameFC921677
Unique NameFC921677
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length646
Libraries
Library NameType
RVDevelopNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK17_MOUSE (Cell division protein kinase 17 OS=Mus musculus GN=Cdk17 PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 3.696e-47
Identity = 100/207 (48.31%), Postives = 140/207 (67.63%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVT 631
            M+ + KLEK+GEGTY  VY+ R K T  +VALK+ RL E +EG P T +REVS+L+ L +  ++V L D+           L LVFEY+D DLK+Y+      G  + ++ VK  +YQ+ +G+A+CH   +LHRDLKP NLL++ +   LK+AD GLARA ++P K Y++E++TLWYR P+VLLGS+ YST  DMW V CIF E+ +
Sbjct:  189 METYIKLEKLGEGTYATVYKGRSKLTENLVALKEIRL-EHEEGAPCTAIREVSLLKDL-KHANIVTLHDIVHTDKS-----LTLVFEYLDKDLKQYMDD---CGNIMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG-ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMAS 384          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK18_PONAB (Cell division protein kinase 18 OS=Pongo abelii GN=CDK18 PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.404e-46
Identity = 100/207 (48.31%), Postives = 140/207 (67.63%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVT 631
            ++ + KL+K+GEGTY  V++ R K T  +VALK+ RL E +EG P T +REVS+L+ L +  ++V L D+           L LVFEY+D+DLK+Y+      G  + ++ VK  M+QL +G+A+CH   ILHRDLKP NLL++ +   LK+AD GLARA ++P K Y++E++TLWYR P+VLLGST YST  DMW V CI  E+ T
Sbjct:  139 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRL-EHEEGAPCTAIREVSLLKNL-KHANIVTLHDLIHTDRS-----LTLVFEYLDSDLKQYLD---HCGNLMSMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERG-ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEMAT 334          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK18_HUMAN (Cell division protein kinase 18 OS=Homo sapiens GN=CDK18 PE=1 SV=3)

HSP 1 Score: 186.037 bits (471), Expect = 1.404e-46
Identity = 100/207 (48.31%), Postives = 140/207 (67.63%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVT 631
            ++ + KL+K+GEGTY  V++ R K T  +VALK+ RL E +EG P T +REVS+L+ L +  ++V L D+           L LVFEY+D+DLK+Y+      G  + ++ VK  M+QL +G+A+CH   ILHRDLKP NLL++ +   LK+AD GLARA ++P K Y++E++TLWYR P+VLLGST YST  DMW V CI  E+ T
Sbjct:  139 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRL-EHEEGAPCTAIREVSLLKNL-KHANIVTLHDLIHTDRS-----LTLVFEYLDSDLKQYLD---HCGNLMSMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERG-ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCIHYEMAT 334          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CKD18_RAT (Cell division protein kinase 18 OS=Rattus norvegicus GN=Cdk18 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.834e-46
Identity = 100/207 (48.31%), Postives = 140/207 (67.63%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVT 631
            ++ + KL+K+GEGTY  V++ R K T  +VALK+ RL E +EG P T +REVS+L+ L +  ++V L D+           L LVFEY+D+DLK+Y+      G  + ++ VK  M+QL +G+A+CH   ILHRDLKP NLL++ +   LK+AD GLARA ++P K Y++E++TLWYR P+VLLGST YST  DMW V CI  E+ T
Sbjct:  118 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRL-EHEEGAPCTAIREVSLLKDL-KHANIVTLHDLIHTDRS-----LTLVFEYLDSDLKQYLD---HCGNLMNMHNVKIFMFQLLRGLAYCHRRKILHRDLKPQNLLINERG-ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMAT 313          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK2_ENTHI (Cell division protein kinase 2 homolog OS=Entamoeba histolytica GN=CDC2 PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.834e-46
Identity = 94/209 (44.98%), Postives = 139/209 (66.51%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTRQ 637
            M  +EK +++GEGTYG V +A +    + VALKK +   +D+G+P T++RE+++L  L + P+VV L D+           LYLVFE+ D DL +    F      IP+N  +S++YQ+ +G+AFCH H ILHRD+KP N+L++ K  T+K+ + GLAR  T+  +KYT E++TLWYRAPE+LLG+T Y  A D+WS A IF EL+ ++
Sbjct:    1 MTRYEKKQQLGEGTYGVVCKAWDTVCNRYVALKKIKQEREDDGIPVTSVREIAVLLEL-KHPNVVDLYDIYLEDK-----FLYLVFEFCDEDLYQ----FMSRSSKIPINETRSIVYQILQGLAFCHYHQILHRDMKPQNILIN-KNGTIKLGEFGLARLTTINDRKYTSEVVTLWYRAPEILLGATQYGGAIDIWSTAAIFGELINKE 198          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK18_MOUSE (Cell division protein kinase 18 OS=Mus musculus GN=Cdk18 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 1.834e-46
Identity = 100/207 (48.31%), Postives = 140/207 (67.63%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVT 631
            ++ + KL+K+GEGTY  V++ R K T  +VALK+ RL E +EG P T +REVS+L+ L +  ++V L D+           L LVFEY+D+DLK+Y+      G  + ++ VK  M+QL +G+A+CH   ILHRDLKP NLL++ +   LK+AD GLARA ++P K Y++E++TLWYR P+VLLGST YST  DMW V CI  E+ T
Sbjct:  118 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRL-EHEEGAPCTAIREVSLLKDL-KHANIVTLHDLIHTDRS-----LTLVFEYLDSDLKQYLD---HCGNLMNMHNVKIFMFQLLRGLAYCHHRKILHRDLKPQNLLINERG-ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMAT 313          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK16_RAT (Cell division protein kinase 16 OS=Rattus norvegicus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.189e-45
Identity = 97/207 (46.86%), Postives = 139/207 (67.15%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVT 631
            ++ + KL+K+GEGTY  VY+ + K T  +VALK+ RL E +EG P T +REVS+L+ L +  ++V L D+   +       L LVFEY+D DLK+Y+      G  I ++ VK  ++QL +G+A+CH   +LHRDLKP NLL++ +   LK+AD GLA A ++P K Y++E++TLWYR P++LLGST YS   DMW V CIF E+ T
Sbjct:  162 LETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRL-EHEEGAPCTAIREVSLLKDL-KHANIVTLHDIIHTEKS-----LTLVFEYLDKDLKQYLDD---CGNVINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERG-ELKLADFGLAYAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSGQIDMWGVGCIFYEMAT 357          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSJ (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. japonica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.518e-45
Identity = 95/208 (45.67%), Postives = 138/208 (66.35%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTR 634
            +D FE+L  + EGTYG V+R R+K TG+IVALKK ++ ++ EG P T+LRE++IL +    P +V + +V  G N      +++V EYM+ DLK  + + +Q       + VK LM QL +GV + H + +LHRDLK  NLL++ +   LKI D GL+R +  P+K YT  ++TLWYRAPE+LLG+  YSTA DMWS+ CI  EL+++
Sbjct:  346 VDEFERLNTINEGTYGVVFRVRDKRTGEIVALKKVKMEKEREGFPLTSLREMNIL-LSFHHPSIVEVKEVVVGSNDRD---IFMVMEYMEHDLKGVMETMKQPYSQ---SEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRG-ELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLSK 545          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDKG1_ORYSI (Cyclin-dependent kinase G-1 OS=Oryza sativa subsp. indica GN=CDKG-1 PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.518e-45
Identity = 95/208 (45.67%), Postives = 138/208 (66.35%), Query Frame = 2
Query:   11 MDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELVTR 634
            +D FE+L  + EGTYG V+R R+K TG+IVALKK ++ ++ EG P T+LRE++IL +    P +V + +V  G N      +++V EYM+ DLK  + + +Q       + VK LM QL +GV + H + +LHRDLK  NLL++ +   LKI D GL+R +  P+K YT  ++TLWYRAPE+LLG+  YSTA DMWS+ CI  EL+++
Sbjct:  346 VDEFERLNTINEGTYGVVFRVRDKRTGEIVALKKVKMEKEREGFPLTSLREMNIL-LSFHHPSIVEVKEVVVGSNDRD---IFMVMEYMEHDLKGVMETMKQPYSQ---SEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLLNNRG-ELKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGAKDYSTAIDMWSLGCIMGELLSK 545          
BLAST of FC921677 vs. ExPASy Swiss-Prot
Match: CDK14_MOUSE (Cell division protein kinase 14 OS=Mus musculus GN=Cdk14 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 2.928e-44
Identity = 98/205 (47.80%), Postives = 136/205 (66.34%), Query Frame = 2
Query:   14 DAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDDEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGRTVLYLVFEYMDTDLKKYIRSFRQTGENIPVNTVKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMTLKIADLGLARAFTLPIKKYTHEILTLWYRAPEVLLGSTHYSTAGDMWSVACIFAELV 628
            D++EKLEK+GEG+Y  VY+ + K  GK+VALK  RL E+ EG P T +RE S+L+ L +  ++V L D+   +       L LVFEY+ TDL +Y+    Q    +  + VK  ++QL +G+++ H   ILHRDLKP NLL+   T  LK+AD GLARA ++P   Y++E++TLWYR P+VLLGST YST  DMW V CIF E++
Sbjct:  133 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE-EGTPFTAIREASLLKGL-KHANIVLLHDIIHTKE-----TLTLVFEYVHTDLCQYME---QHPGGLHPDNVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS-DTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMI 326          
The following BLAST results are available for this feature:
BLAST of FC921677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK17_MOUSE3.696e-4748.31Cell division protein kinase 17 OS=Mus musculus GN... [more]
CDK18_PONAB1.404e-4648.31Cell division protein kinase 18 OS=Pongo abelii GN... [more]
CDK18_HUMAN1.404e-4648.31Cell division protein kinase 18 OS=Homo sapiens GN... [more]
CKD18_RAT1.834e-4648.31Cell division protein kinase 18 OS=Rattus norvegic... [more]
CDK2_ENTHI1.834e-4644.98Cell division protein kinase 2 homolog OS=Entamoeb... [more]
CDK18_MOUSE1.834e-4648.31Cell division protein kinase 18 OS=Mus musculus GN... [more]
CDK16_RAT1.189e-4546.86Cell division protein kinase 16 OS=Rattus norvegic... [more]
CDKG1_ORYSJ4.518e-4545.67Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CDKG1_ORYSI4.518e-4545.67Cyclin-dependent kinase G-1 OS=Oryza sativa subsp.... [more]
CDK14_MOUSE2.928e-4447.80Cell division protein kinase 14 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionC32108A10EF RVDevelopN Citrus clementina cDNA clone C32108A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC921677 ID=FC921677; Name=FC921677; organism=Citrus clementina; type=EST; length=646bp
AAGAATGGTGATGGACGCATTTGAGAAGCTAGAGAAAGTAGGAGAAGGGA
CGTACGGGAAAGTATACAGAGCAAGAGAGAAGGCAACTGGGAAGATCGTT
GCTCTCAAGAAGACTCGTCTCCACGAGGACGATGAAGGCGTACCCCCAAC
CACTCTCCGGGAGGTCTCCATCTTGCGCATGCTCTCTCGCGATCCCCATG
TTGTTAGGTTGATGGATGTCAAACAAGGCCAGAACAAGGAAGGCAGGACG
GTGCTCTACCTTGTTTTTGAGTACATGGACACTGATCTGAAGAAGTACAT
CCGAAGCTTCCGCCAAACTGGAGAGAACATTCCTGTTAACACTGTCAAGA
GCTTAATGTACCAACTTTGCAAGGGTGTTGCTTTCTGCCATGGACATGGA
ATCCTTCATAGGGACCTTAAGCCTCACAATCTGTTGATGGACCGAAAGAC
TATGACACTTAAGATAGCAGATCTTGGTTTAGCTCGAGCATTTACTCTTC
CAATTAAGAAATATACTCATGAGATATTGACCCTCTGGTATAGGGCTCCG
GAAGTCCTTTTGGGGTCCACCCATTACTCAACTGCAGGTGATATGTGGTC
TGTTGCCTGTATATTTGCGGAACTGGTTACAAGACAGCACTTTTCC
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