FC921682 | Citrus Genome Database

Overview


Name	FC921682
Unique Name	FC921682
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	619

Libraries


Library Name	Type
RVDevelopN	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of FC921682 vs. ExPASy Swiss-Prot
Match: ENO_HOMGA (Enolase OS=Homarus gammarus PE=1 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 3.458e-76
Identity = 138/206 (66.99%), Postives = 165/206 (80.10%), Query Frame = 1

Query:    1 ACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKIKIGMDVAASEFFTKDGNYDLNFRKQPNDGAHVLSAQSLGDLYKEFVRKFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKY 618
            A  VGDEGGFAPN+ +N++ L L+ +AI+KAGYTGKI+IGMDVAASEF+ ++  YDL+F+   NDG+  +S   L D+Y EF + FPIVSIEDPFDQDDW +W+ + S   IQ+VGDDL VTNPKRI  A++KK+C  LLLKVNQIG+VTESI A L +K  GWG MVSHRSGETED FIADL VGL +GQIKTGAPCRSERLAKY
Sbjct:  203 ATAVGDEGGFAPNILNNKDALDLIQEAIKKAGYTGKIEIGMDVAASEFYKQNNIYDLDFKTANNDGSQKISGDQLRDMYMEFCKDFPIVSIEDPFDQDDWETWSKMTSGTTIQIVGDDLTVTNPKRITTAVEKKACKCLLLKVNQIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDCFIADLVVGLCTGQIKTGAPCRSERLAKY 408

[Close]

BLAST of FC921682 vs. ExPASy Swiss-Prot
Match: ENOA_PYTRG (Alpha-enolase OS=Python regius PE=2 SV=3)

HSP 1 Score: 284.263 bits (726), Expect = 3.458e-76
Identity = 142/206 (68.93%), Postives = 166/206 (80.58%), Query Frame = 1

Query:    1 ACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKIKIGMDVAASEFFTKDGNYDLNFRKQPNDGAHVLSAQSLGDLYKEFVRKFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKY 618
            A NVGDEGGFAPN+ +N+E L LL  AI KAGY  KI IGMDVAASEF+ +DG YDL+F K P+D +  ++   L DLYK FV+ +P+VSIEDPFDQDDW +W    +   IQ+VGDDL VTNPKRIA+A+Q+KSCN LLLKVNQIG+VTES+QA   ++S GWGVMVSHRSGETED FIADL VGL +GQIKTGAPCRSERLAKY
Sbjct:  204 ATNVGDEGGFAPNILENKEALELLKTAISKAGYADKIVIGMDVAASEFY-RDGKYDLDF-KSPDDRSRYITPDQLADLYKGFVKNYPVVSIEDPFDQDDWPAWKKFTAESGIQVVGDDLTVTNPKRIAKAVQEKSCNCLLLKVNQIGSVTESLQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKY 407

[Close]

BLAST of FC921682 vs. ExPASy Swiss-Prot
Match: ENOB_PIG (Beta-enolase OS=Sus scrofa GN=ENO3 PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 4.517e-76
Identity = 140/206 (67.96%), Postives = 169/206 (82.04%), Query Frame = 1

Query:    1 ACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKIKIGMDVAASEFFTKDGNYDLNFRKQPNDGAHVLSAQSLGDLYKEFVRKFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKY 618
            A NVGDEGGFAPN+ +N E L LL  AI+ AGY  K+ IGMDVAASEF+ ++G YDL+F K P+D +  ++ + LG+LYK F++ +P+VSIEDPFDQDDW +W S  S V+IQ+VGDDL VTN KRIA+A++KK+CN LLLKVNQIG+VTESIQA   ++S GWGVMVSHRSGETED FIADL VGL +GQIKTGAPCRSERLAKY
Sbjct:  204 ATNVGDEGGFAPNILENNEALELLKTAIQAAGYPDKVVIGMDVAASEFY-RNGKYDLDF-KSPDDPSRHITGEKLGELYKSFIKNYPVVSIEDPFDQDDWKTWTSFLSGVNIQIVGDDLTVTNLKRIAQAVEKKACNCLLLKVNQIGSVTESIQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKY 407

[Close]

BLAST of FC921682 vs. ExPASy Swiss-Prot
Match: ENOG_HUMAN (Gamma-enolase OS=Homo sapiens GN=ENO2 PE=1 SV=3)

HSP 1 Score: 283.493 bits (724), Expect = 5.899e-76
Identity = 139/206 (67.48%), Postives = 169/206 (82.04%), Query Frame = 1

Query:    1 ACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKIKIGMDVAASEFFTKDGNYDLNFRKQPNDGAHVLSAQSLGDLYKEFVRKFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKY 618
            A NVGDEGGFAPN+ +N E L L+ +AI+KAGYT KI IGMDVAASEF+ +DG YDL+F K P D +  ++   LG LY++FVR +P+VSIEDPFDQDDW++W+   ++V IQ+VGDDL VTNPKRI  A+++K+CN LLLKVNQIG+VTE+IQA   ++  GWGVMVSHRSGETED FIADL VGL +GQIKTGAPCRSERLAKY
Sbjct:  204 ATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKIVIGMDVAASEFY-RDGKYDLDF-KSPTDPSRYITGDQLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKY 407

[Close]

BLAST of FC921682 vs. ExPASy Swiss-Prot
Match: ENOA_TRASC (Alpha-enolase OS=Trachemys scripta PE=2 SV=3)

HSP 1 Score: 283.108 bits (723), Expect = 7.704e-76
Identity = 137/206 (66.50%), Postives = 169/206 (82.04%), Query Frame = 1

Query:    1 ACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKIKIGMDVAASEFFTKDGNYDLNFRKQPNDGAHVLSAQSLGDLYKEFVRKFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKY 618
            A NVGDEGGFAPN+ +++E L LL  AI KAGYT K+ IGMDVAASEF+ +DG YDL+F K P+D +  ++   L DLYK F++ +P+VS+EDPFDQDDWS+W    ++V +Q+VGDDL VTNPKRIA+ +++KSCN LLL+VNQIG+VTES+QA   ++S GWGVMVSHRSGETED FIADL VGL +GQIKTGAPCRSERLAKY
Sbjct:  204 ATNVGDEGGFAPNILEDKEALELLKTAISKAGYTDKVVIGMDVAASEFY-RDGKYDLDF-KSPDDPSRYITPDQLADLYKSFIKSYPLVSVEDPFDQDDWSAWKKFTATVGVQVVGDDLTVTNPKRIAKPVEEKSCNCLLLQVNQIGSVTESLQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKY 407

[Close]

BLAST of FC921682 vs. ExPASy Swiss-Prot
Match: ENOG_RAT (Gamma-enolase OS=Rattus norvegicus GN=Eno2 PE=1 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 1.716e-75
Identity = 138/206 (66.99%), Postives = 169/206 (82.04%), Query Frame = 1

Query:    1 ACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKIKIGMDVAASEFFTKDGNYDLNFRKQPNDGAHVLSAQSLGDLYKEFVRKFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKY 618
            A NVGDEGGFAPN+ +N E L L+ +AI+KAGYT K+ IGMDVAASEF+ +DG YDL+F K P D +  ++   LG LY++FVR +P+VSIEDPFDQDDW++W+   ++V IQ+VGDDL VTNPKRI  A+++K+CN LLLKVNQIG+VTE+IQA   ++  GWGVMVSHRSGETED FIADL VGL +GQIKTGAPCRSERLAKY
Sbjct:  204 ATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKMVIGMDVAASEFY-RDGKYDLDF-KSPADPSRCITGDQLGALYQDFVRNYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKY 407

[Close]

BLAST of FC921682 vs. ExPASy Swiss-Prot
Match: ENOG_MOUSE (Gamma-enolase OS=Mus musculus GN=Eno2 PE=1 SV=2)

HSP 1 Score: 281.952 bits (720), Expect = 1.716e-75
Identity = 138/206 (66.99%), Postives = 169/206 (82.04%), Query Frame = 1

Query:    1 ACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKIKIGMDVAASEFFTKDGNYDLNFRKQPNDGAHVLSAQSLGDLYKEFVRKFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKY 618
            A NVGDEGGFAPN+ +N E L L+ +AI+KAGYT K+ IGMDVAASEF+ +DG YDL+F K P D +  ++   LG LY++FVR +P+VSIEDPFDQDDW++W+   ++V IQ+VGDDL VTNPKRI  A+++K+CN LLLKVNQIG+VTE+IQA   ++  GWGVMVSHRSGETED FIADL VGL +GQIKTGAPCRSERLAKY
Sbjct:  204 ATNVGDEGGFAPNILENSEALELVKEAIDKAGYTEKMVIGMDVAASEFY-RDGKYDLDF-KSPADPSRYITGDQLGALYQDFVRNYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQIGSVTEAIQACKLAQENGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKY 407

[Close]

BLAST of FC921682 vs. ExPASy Swiss-Prot
Match: ENOA_SCEUN (Alpha-enolase OS=Sceloporus undulatus PE=2 SV=3)

HSP 1 Score: 281.567 bits (719), Expect = 2.242e-75
Identity = 138/206 (66.99%), Postives = 167/206 (81.07%), Query Frame = 1

Query:    1 ACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKIKIGMDVAASEFFTKDGNYDLNFRKQPNDGAHVLSAQSLGDLYKEFVRKFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKY 618
            A NVGDEGGFAPN+ +N+E L LL  AI KAGYT KI IGMDVAASEF+ +DG YDL+F K P+D +  ++   L DLYK F++ +P+VSIEDPFDQ DW++W    +S  IQ+VGDDL VTNP+RI +A+++KSCN LLLKVNQIG+VTES+QA   +++ GWGVMVSHRSGETED FIADL VGL +GQIKTGAPCRSERLAKY
Sbjct:  204 ATNVGDEGGFAPNILENKEALELLKSAISKAGYTDKIVIGMDVAASEFY-RDGKYDLDF-KSPDDPSRYITPDQLSDLYKGFIKNYPVVSIEDPFDQHDWAAWKKFTASAGIQVVGDDLTVTNPRRITKAVEEKSCNCLLLKVNQIGSVTESLQACKLAQTNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKY 407

[Close]

BLAST of FC921682 vs. ExPASy Swiss-Prot
Match: ENO_LOLPE (Enolase OS=Loligo pealeii PE=2 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 2.928e-75
Identity = 138/206 (66.99%), Postives = 165/206 (80.10%), Query Frame = 1

Query:    1 ACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKIKIGMDVAASEFFTKDGNYDLNFRKQPNDGAHVLSAQSLGDLYKEFVRKFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKY 618
            ACNVGDEGGFAPN+ DN+EGL LL  AI  AGYT +I+IGMDVAASEF  K+  YDL+F+   ++    L++  L D+YK+FV+ +P+VSIEDPFDQDDW ++  +   +DIQ+VGDDLLVTNPKR+ + I  K+ N LLLKVNQIG+VTESIQA   S+ AGWGVMVSHRSGETED FIADL VGL +GQIKTGAPCRSERLAKY
Sbjct:  204 ACNVGDEGGFAPNILDNKEGLELLKTAIANAGYTAEIEIGMDVAASEF-CKEKKYDLDFKNPDSNPNDWLTSDQLADVYKDFVKNYPVVSIEDPFDQDDWEAYTKMTKDMDIQIVGDDLLVTNPKRVQKGIDLKAANALLLKVNQIGSVTESIQACKMSQDAGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKY 408

[Close]

BLAST of FC921682 vs. ExPASy Swiss-Prot
Match: ENOA_MOUSE (Alpha-enolase OS=Mus musculus GN=Eno1 PE=1 SV=3)

HSP 1 Score: 281.182 bits (718), Expect = 2.928e-75
Identity = 140/206 (67.96%), Postives = 165/206 (80.10%), Query Frame = 1

Query:    1 ACNVGDEGGFAPNVQDNREGLVLLTDAIEKAGYTGKIKIGMDVAASEFFTKDGNYDLNFRKQPNDGAHVLSAQSLGDLYKEFVRKFPIVSIEDPFDQDDWSSWASLQSSVDIQLVGDDLLVTNPKRIAEAIQKKSCNGLLLKVNQIGTVTESIQAALDSKSAGWGVMVSHRSGETEDNFIADLSVGLASGQIKTGAPCRSERLAKY 618
            A NVGDEGGFAPN+ +N+E L LL  AI KAGYT ++ IGMDVAASEF+ + G YDL+F K P+D +  ++   L DLYK FV+ +P+VSIEDPFDQDDW +W    +S  IQ+VGDDL VTNPKRIA+A  +KSCN LLLKVNQIG+VTES+QA   ++S GWGVMVSHRSGETED FIADL VGL +GQIKTGAPCRSERLAKY
Sbjct:  204 ATNVGDEGGFAPNILENKEALELLKTAIAKAGYTDQVVIGMDVAASEFY-RSGKYDLDF-KSPDDPSRYITPDQLADLYKSFVQNYPVVSIEDPFDQDDWGAWQKFTASAGIQVVGDDLTVTNPKRIAKAASEKSCNCLLLKVNQIGSVTESLQACKLAQSNGWGVMVSHRSGETEDTFIADLVVGLCTGQIKTGAPCRSERLAKY 407

The following BLAST results are available for this feature:

BLAST of FC921682 vs. ExPASy Swiss-Prot

BLAST of FC921682 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_HOMGA	3.458e-76	66.99	Enolase OS=Homarus gammarus PE=1 SV=1	[more]
ENOA_PYTRG	3.458e-76	68.93	Alpha-enolase OS=Python regius PE=2 SV=3	[more]
ENOB_PIG	4.517e-76	67.96	Beta-enolase OS=Sus scrofa GN=ENO3 PE=2 SV=1	[more]
ENOG_HUMAN	5.899e-76	67.48	Gamma-enolase OS=Homo sapiens GN=ENO2 PE=1 SV=3	[more]
ENOA_TRASC	7.704e-76	66.50	Alpha-enolase OS=Trachemys scripta PE=2 SV=3	[more]
ENOG_RAT	1.716e-75	66.99	Gamma-enolase OS=Rattus norvegicus GN=Eno2 PE=1 SV...	[more]
ENOG_MOUSE	1.716e-75	66.99	Gamma-enolase OS=Mus musculus GN=Eno2 PE=1 SV=2	[more]
ENOA_SCEUN	2.242e-75	66.99	Alpha-enolase OS=Sceloporus undulatus PE=2 SV=3	[more]
ENO_LOLPE	2.928e-75	66.99	Enolase OS=Loligo pealeii PE=2 SV=1	[more]
ENOA_MOUSE	2.928e-75	67.96	Alpha-enolase OS=Mus musculus GN=Eno1 PE=1 SV=3	[more]

Pages

Properties


Property Name	Value
Genbank description	C32108B03EF RVDevelopN Citrus clementina cDNA clone C32108B03, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>FC921682 ID=FC921682; Name=FC921682; organism=Citrus clementina; type=EST; length=619bp
GCTTGCAATGTTGGAGATGAAGGAGGTTTTGCTCCCAATGTTCAGGATAA
CAGGGAGGGGCTAGTTTTGCTTACTGATGCAATTGAAAAGGCTGGTTATA
CTGGCAAGATCAAAATTGGAATGGATGTTGCAGCTTCAGAGTTTTTCACT
AAAGATGGAAACTATGATCTGAACTTCAGGAAACAACCAAATGATGGAGC
TCATGTGTTGTCAGCTCAGAGTCTTGGTGATCTCTACAAGGAGTTTGTCA
GAAAATTCCCTATTGTGTCAATTGAAGACCCCTTCGACCAAGATGATTGG
AGCTCATGGGCTTCCTTGCAGTCTTCAGTTGATATTCAACTAGTGGGAGA
TGACCTTTTGGTGACAAATCCAAAGAGAATAGCTGAAGCCATTCAGAAAA
AGTCGTGCAACGGATTACTTCTAAAGGTTAATCAGATAGGCACTGTGACC
GAATCCATCCAAGCAGCACTTGACTCTAAATCTGCAGGTTGGGGTGTGAT
GGTCAGCCACCGTAGTGGTGAAACTGAAGATAATTTTATTGCTGATCTTT
CTGTTGGTTTGGCTAGCGGACAGATCAAGACTGGTGCTCCTTGCCGAAGT
GAGAGATTGGCCAAGTATA