FC923091

Overview
NameFC923091
Unique NameFC923091
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14283 contig Ccv1_Contig14283:71..764. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923091 vs. ExPASy Swiss-Prot
Match: CHLI_GUITH (Magnesium-chelatase subunit chlI OS=Guillardia theta GN=chlI PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.400e-50
Identity = 97/142 (68.31%), Postives = 115/142 (80.99%), Query Frame = 2
Query:  266 SKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLC*AKQRI 691
            +K  +RPV+PFTAIVGQEEMKL L LNVIDPKIGGV+IMGDRGTGKSTT+R++ D+LP I +V  DP+NS P+D + M  EVR  + KGE +     K++M+DLPLGATEDRVCGTIDIEKALTEGVKAFEPGLL  A + I
Sbjct:    6 TKTKERPVFPFTAIVGQEEMKLALTLNVIDPKIGGVIIMGDRGTGKSTTIRAITDILPEIPIVENDPFNSHPQDFDLMSDEVRSRIEKGESIPSVMKKVSMIDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGI 147          
BLAST of FC923091 vs. ExPASy Swiss-Prot
Match: CHLI_EUGGR (Magnesium-chelatase subunit chlI OS=Euglena gracilis GN=chlI PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.185e-49
Identity = 100/141 (70.92%), Postives = 114/141 (80.85%), Query Frame = 2
Query:  269 KESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLC*AKQRI 691
            K ++RPV+PFT+IVGQEEMKL L+LNVIDPKIGGVMIMGDRGTGKST VR+LVDLLP I V+  DPYNSDP D E M  +V E + K E++SI   K  MVDLPLG TEDRVCGTIDIEKA++EG KAFEPGLL  A + I
Sbjct:    4 KTNERPVFPFTSIVGQEEMKLSLILNVIDPKIGGVMIMGDRGTGKSTIVRALVDLLPPIDVIENDPYNSDPYDTELMSDDVLEKIKKNEKVSIIQVKTPMVDLPLGGTEDRVCGTIDIEKAISEGKKAFEPGLLAQANRGI 144          
BLAST of FC923091 vs. ExPASy Swiss-Prot
Match: CHLI_ODOSI (Magnesium-chelatase subunit chlI OS=Odontella sinensis GN=chlI PE=3 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.684e-49
Identity = 99/141 (70.21%), Postives = 112/141 (79.43%), Query Frame = 2
Query:  269 KESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLC*AKQRI 691
            K+   PV+PFTAIVGQEEMKL L LNVIDPKIGGVMIMGDRGTGKSTT+R++ DLLP I+VV  DP+NS   D + MG E++ ++  GE L     KI MVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLL  A + I
Sbjct:    7 KKFSTPVFPFTAIVGQEEMKLALQLNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVVKDDPFNSHKSDLDLMGNEIKLAIQNGESLETELIKIPMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGI 147          
BLAST of FC923091 vs. ExPASy Swiss-Prot
Match: CHLI_PORPU (Magnesium-chelatase subunit chlI OS=Porphyra purpurea GN=chlI PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.920e-48
Identity = 96/144 (66.67%), Postives = 114/144 (79.17%), Query Frame = 2
Query:  260 KRSKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLC*AKQRI 691
            K +KE+ RPV+PFTAIVGQEEMKL L+LNVIDPKIGGVMIMGDRGTGKSTT+R++ DLLP I++V  D +NS P D + M  E + ++  G  +   + K+ MVDLPLGATEDRVCGTIDIEKALTEGVK FEPGLL  A + I
Sbjct:    6 KENKETVRPVFPFTAIVGQEEMKLALMLNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPKIEIVKDDLFNSHPSDVDLMSDENKHALQNGINIDKAYIKVPMVDLPLGATEDRVCGTIDIEKALTEGVKTFEPGLLAKANRGI 149          
BLAST of FC923091 vs. ExPASy Swiss-Prot
Match: CHLI_PORYE (Magnesium-chelatase subunit chlI OS=Porphyra yezoensis GN=chlI PE=3 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.981e-48
Identity = 96/144 (66.67%), Postives = 116/144 (80.56%), Query Frame = 2
Query:  260 KRSKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLC*AKQRI 691
            K +KE+ RPV+PFTAIVGQEEMKL L+LNVIDPKIGGVMIMGDRGTGKSTT+R++ DLLP I+VV  D +NS P D + M  E ++++  G  L+ ++  + MVDLPLGATEDRVCGTIDIEKALTEG+K FEPGLL  A + I
Sbjct:    6 KENKETIRPVFPFTAIVGQEEMKLALILNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPKIEVVKDDLFNSHPMDVDLMSDENKKTLQDGVALTTSYINVPMVDLPLGATEDRVCGTIDIEKALTEGIKTFEPGLLAKANRGI 149          
BLAST of FC923091 vs. ExPASy Swiss-Prot
Match: CHLI_BIGNA (Magnesium-chelatase subunit chlI OS=Bigelowiella natans GN=chlI PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 3.022e-45
Identity = 94/137 (68.61%), Postives = 107/137 (78.10%), Query Frame = 2
Query:  281 RPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLC*AKQRI 691
            R  +PFTA++GQ  MKL L+LNVIDPKIGGVM MGDRGTGKST VRSLVDLLP I+VV  DP+NSDP D + M  EV+E+   GE++  T  K  MVDLPLGATEDRVCGTIDIEKAL +G KAFEPGLL  A + I
Sbjct:   20 RQAFPFTALIGQTNMKLALILNVIDPKIGGVMSMGDRGTGKSTIVRSLVDLLPNIQVVSEDPFNSDPIDYDLMSQEVKEAKKSGEKIYTTSIKTPMVDLPLGATEDRVCGTIDIEKALIDGTKAFEPGLLAKANRGI 156          
BLAST of FC923091 vs. ExPASy Swiss-Prot
Match: CHLI_CYACA (Magnesium-chelatase subunit chlI OS=Cyanidium caldarium GN=chlI PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.732e-45
Identity = 89/133 (66.92%), Postives = 108/133 (81.20%), Query Frame = 2
Query:  287 VYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLC*AKQ 685
            V+PFTAIVGQEEMK+ LLLNV+DPKIGGVMIMGDRGTGK+TT+R+LVD+LP I VV  DPYNS P D + M  EV+  V+    +   ++K+ +VDLPLGATEDRVCG+IDIEKAL+EG K+FEPGLL  A +
Sbjct:   17 VFPFTAIVGQEEMKISLLLNVVDPKIGGVMIMGDRGTGKTTTIRALVDILPDILVVKDDPYNSHPHDVDLMSSEVQALVLNRMNIETCYTKVPLVDLPLGATEDRVCGSIDIEKALSEGKKSFEPGLLAKANR 149          
BLAST of FC923091 vs. ExPASy Swiss-Prot
Match: CHLI_OLILU (Magnesium-chelatase subunit chlI OS=Olisthodiscus luteus GN=chlI PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 5.897e-41
Identity = 89/141 (63.12%), Postives = 106/141 (75.18%), Query Frame = 2
Query:  269 KESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLC*AKQRI 691
            K+   P++PFTAIVGQEEMKL L LNVIDPKIGGVMIMGDRGTGKSTT+R++ DLLP I+VV  + +N+ P +      ++ E +VK         K  M+DLPLGATEDRVCGTIDIEKALT+GVKAFEPGLL  A + I
Sbjct:    5 KKINPPIFPFTAIVGQEEMKLALQLNVIDPKIGGVMIMGDRGTGKSTTIRAIADLLPEIEVVKDNQFNTAPSE------DLNEEIVK--------IKTPMIDLPLGATEDRVCGTIDIEKALTDGVKAFEPGLLAKANRGI 131          
BLAST of FC923091 vs. ExPASy Swiss-Prot
Match: CHLI_ANAVA (Magnesium-chelatase subunit chlI (Fragment) OS=Anabaena variabilis GN=chlI PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.241e-40
Identity = 82/113 (72.57%), Postives = 91/113 (80.53%), Query Frame = 2
Query:  353 DPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPEDPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLC*AKQRI 691
            DPKIGGVMIMGDRGTGKSTT+R+L DLLP I VV  DP+NSDP DP+ M  EVR+    G E+ I F K+ MVDLPLGATEDRVCGTIDIEKAL+EGVKAFEPGLL  A + I
Sbjct:    1 DPKIGGVMIMGDRGTGKSTTIRALADLLPEIPVVANDPFNSDPSDPDLMSDEVRQKSGTGAEIPIEFKKVQMVDLPLGATEDRVCGTIDIEKALSEGVKAFEPGLLAKANRGI 113          
BLAST of FC923091 vs. ExPASy Swiss-Prot
Match: BCHI_CHLTE (Magnesium-chelatase 38 kDa subunit OS=Chlorobium tepidum GN=bchI PE=3 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.236e-39
Identity = 91/164 (55.49%), Postives = 112/164 (68.29%), Query Frame = 2
Query:  191 KMGRALFAVTNVATEVNSVEQAQK-RSKESQRPVYPFTAIVGQEEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPVIKVVVGDPYNSDPE---DPEAMGIEVRESVVKGEELSITFSKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLL 670
            K   A  A   V  E  +V + +K  +K+     +PFTAIVGQEEMKL L+LN+IDP+IGGV++MG RGTGKSTTVR+L ++LP+I  V GD YN   E   + EA G       +K E++      + +VDLPLGATEDRVCGTIDIEKALT GVKAFEPGLL
Sbjct:   15 KASAAKEAKVKVTAEEKAVTEVKKPAAKKKSALAFPFTAIVGQEEMKLSLILNIIDPRIGGVLVMGHRGTGKSTTVRALAEVLPLIPRVKGDIYNRTVEQYIEMEAAG--KGAPAIKPEDVETELIPVPVVDLPLGATEDRVCGTIDIEKALTSGVKAFEPGLL 176          
The following BLAST results are available for this feature:
BLAST of FC923091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CHLI_GUITH1.400e-5068.31Magnesium-chelatase subunit chlI OS=Guillardia the... [more]
CHLI_EUGGR1.185e-4970.92Magnesium-chelatase subunit chlI OS=Euglena gracil... [more]
CHLI_ODOSI7.684e-4970.21Magnesium-chelatase subunit chlI OS=Odontella sine... [more]
CHLI_PORPU2.920e-4866.67Magnesium-chelatase subunit chlI OS=Porphyra purpu... [more]
CHLI_PORYE4.981e-4866.67Magnesium-chelatase subunit chlI OS=Porphyra yezoe... [more]
CHLI_BIGNA3.022e-4568.61Magnesium-chelatase subunit chlI OS=Bigelowiella n... [more]
CHLI_CYACA6.732e-4566.92Magnesium-chelatase subunit chlI OS=Cyanidium cald... [more]
CHLI_OLILU5.897e-4163.12Magnesium-chelatase subunit chlI OS=Olisthodiscus ... [more]
CHLI_ANAVA2.241e-4072.57Magnesium-chelatase subunit chlI (Fragment) OS=Ana... [more]
BCHI_CHLTE3.236e-3955.49Magnesium-chelatase 38 kDa subunit OS=Chlorobium t... [more]

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Properties
Property NameValue
Genbank descriptionC31701A02EF StrClemenN Citrus clementina cDNA clone C31701A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923091 ID=FC923091; Name=FC923091; organism=Citrus clementina; type=EST; length=694bp
GGAACAGTAACACTTACATTTGCGCACGGGCATGGCGTCCGTGTTAGGAA
CTCGTTCTTCCTCTGCAATCTTGGCTTCTCGCCCTCTCTCTTTTCCAGCA
TCAAACTCAAAGTCTGCCATCTCCTCTCTCTCCTTAAACCCCGGGCAGAA
TTATGGAAGGAGGTTTTATGGGGGGATTGGGATTGAAGAAAAGATGGGGC
GGGCTCTGTTTGCAGTTACCAATGTTGCCACTGAGGTTAACTCTGTTGAG
CAGGCCCAGAAGAGATCCAAGGAAAGCCAGAGGCCGGTGTATCCATTTAC
TGCAATAGTGGGACAGGAAGAGATGAAATTGTGCCTTTTGTTAAATGTGA
TTGATCCCAAAATTGGTGGTGTTATGATTATGGGTGATAGAGGAACGGGG
AAATCCACCACTGTTAGGTCCTTGGTAGATTTACTCCCCGTAATCAAGGT
AGTTGTCGGTGACCCATATAACTCAGATCCAGAAGATCCAGAGGCCATGG
GTATTGAAGTCAGAGAGTCTGTCGTGAAAGGGGAGGAGCTCTCCATTACA
TTCAGTAAAATCAACATGGTTGATTTGCCATTGGGTGCTACAGAAGACAG
GGTCTGTGGGACGATTGACATTGAGAAAGCTCTAACGGAAGGTGTCAAAG
CATTTGAGCCTGGCCTTCTTTGCTAAGCTAAACAGAGAATTTCT
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