FC923094

Overview
NameFC923094
Unique NameFC923094
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:109..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 2.303e-43
Identity = 98/206 (47.57%), Postives = 126/206 (61.17%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS--KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAPL 719
            LS   Y +SCP L  IVRKQ+  ALK +I +AA LIR+HFHDCFV GCD S+LL+G+ SE+ A PN++  +   + +D ++A V   C  VVSCADIL LAARDSV LSGGP + + LGR+D       +  NLPSPF     I+  F     N  + VALSG HT G A C  F+NRL+        D TL+ +  +NL+   PL
Sbjct:   30 LSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADSEKLAIPNINSAR-GFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCPL 234          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.007e-43
Identity = 91/205 (44.39%), Postives = 133/205 (64.88%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKRHAP 716
            FY  SCP+ + IV   ++ A+ K+  +AA L+R+HFHDCFVQGCD S+LL+ S    SE+NA PN +  +   + +D+++A++ + C + VSCADILALAAR S  LSGGP+++LPLGRRDS+T +      N+P+P S    +L  F+ K  N  + V+LSGGHT+G+A C  F  RLY +      D TL++++   L+   P
Sbjct:   49 FYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVR-GFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICP 252          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.493e-42
Identity = 97/206 (47.09%), Postives = 126/206 (61.17%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS--KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAPL 719
            LS   Y +SCP L  IVR Q++ ALK +I +AA LIR+HFHDCFV GCD SVLL+G+ SE+ A PN++      + +D ++A V   C  VVSCADIL LAARDSV LSGGP + + LGR+D      ++  NLPSPF     I+  F     N  + VALSG HT G A C  F+NRL+        D TL+ T  ++L+   P+
Sbjct:   30 LSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGTNSEKLAIPNVN-SVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALGRKDGLVANQSSANNLPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPI 234          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 1.493e-42
Identity = 88/205 (42.93%), Postives = 132/205 (64.39%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKRHAP 716
            +Y  SCP++  IVR  +  A+ ++  +AA L+R+HFHDCFVQGCDGS+LL+ S    +E+N+ PN S        VD ++A + K+C   VSCAD+L LAARDS  L+GGP++ +PLGRRDS++ +   +  N+P+P +    IL+ F  +  +  + VALSG HT+G + C +F  RLY +      D TL+++FA NL++  P
Sbjct:   34 YYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPN-SKSARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQRCP 237          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 5.672e-42
Identity = 89/205 (43.41%), Postives = 130/205 (63.41%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKRHAP 716
            FY  SCP+ E IVR  +  A+ ++  +AA L+R+HFHDCFVQGCDGS+LL+ S S   E+N+ PN S      + VD+++A +  EC   VSCAD L LAARDS  L+GGP++ +PLGRRDS + +   +  N+P+P +    I+  F  +  +  + VALSG HT+G + C +F  RLY +      D TL++++A NL++  P
Sbjct:   40 FYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPN-SRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQRCP 243          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.407e-42
Identity = 88/210 (41.90%), Postives = 135/210 (64.29%), Query Frame = 3
Query:  117 KGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG---STSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVV--NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            + LS  +YD +CP+ + IV   ++ A+  D  + A L+R+HFHDCFV+GCDGSVLL+    + +E++  PN+SL   A   +D+ +  + ++C  +VSCADIL+LAARD+VALSGGP + +P GR+D +    +    LP+P  N + +  +F ++  +  + VALSGGHT+G AHC +F NRL+      + DPTL+ +FA  L+   P
Sbjct:   21 QALSPHYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEKDGPPNISL--HAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGRISKAIETRQLPAPTFNISQLRQNFGQRGLSMHDLVALSGGHTLGFAHCSSFQNRLHKFNTQKEVDPTLNPSFAARLEGVCP 228          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER42_MAIZE (Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 7.407e-42
Identity = 86/201 (42.79%), Postives = 123/201 (61.19%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF--ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAPL 719
            LS TFYD SCP   S +   + +A+ +   + A L+R+HFHDCF+QGCD S+LL  ++ EQ   PNL+L   A   V+ ++A+V   C  VVSCADILA+AARD V   GGP++ + LGRRDS     +   +LP P S+   +L  + +K  +A + VALSG HT+G A C +F   +Y   D  ++  FA +LK + P+
Sbjct:   31 LSSTFYDTSCPSAMSTISSGVNSAVAQQARVGASLLRLHFHDCFIQGCDASILLNDTSGEQTQPPNLTLNPRAFDVVNSIKAQVEAACPGVVSCADILAVAARDGVVALGGPSWTVLLGRRDSTGSFPSQTSDLPPPTSSLQALLAAYSKKNLDATDMVALSGAHTIGQAQCSSFNGHIY--NDTNINAAFATSLKANCPM 229          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 9.674e-42
Identity = 86/200 (43.00%), Postives = 129/200 (64.50%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFA-TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            LS TFYD+SCP   S +R  + +A++++  + A L+R+HFHDCFV+GCD S+LL  ++ EQ+  PNL+L       V+ ++A+V   C  +VSCADILA+AARD V   GGP++ + LGRRDS  +FA    +LP P S+   +L+ + +K  N  + VALSG HT+G A C +F + +Y   D  ++  FA +L+ + P
Sbjct:   31 LSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTSGEQSQGPNLTLNPRGFVVVNSIKAQVESVCPGIVSCADILAVAARDGVVALGGPSWTVLLGRRDSTASFAGQTSDLPPPTSSLGQLLSAYNKKNLNPTDMVALSGAHTIGQAQCSSFNDHIY--NDTNINSAFAASLRANCP 228          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.263e-41
Identity = 88/211 (41.71%), Postives = 122/211 (57.82%), Query Frame = 3
Query:  102 KPPVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT--FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY----PKQDPTLDKTFANNLKRHAP 716
            +P    G    FY  +CP+ E+IVR  +      D  +A G++R+HFHDCFVQGCDGS+L+ G+ +E+ A PNL+L  +  + +D+ + ++   C  VVSCADILALAARD+V L+ G  + +P GRRD +    +   NLP P  +  V    F     N R+ V L GGHT+G A C  F NRL+       DPT+D TF   L+   P
Sbjct:   28 RPGPVSGTRIGFYLTTCPRAETIVRNAVNAGFSSDPRIAPGILRMHFHDCFVQGCDGSILISGANTERTAGPNLNL--QGFEVIDNAKTQLEAACPGVVSCADILALAARDTVILTQGTGWQVPTGRRDGRVSLASNANNLPGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGCGVFRNRLFNTTGQTADPTIDPTFLAQLQTQCP 236          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.263e-41
Identity = 89/208 (42.79%), Postives = 131/208 (62.98%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG--STSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            L   +Y   CPK E IVR      + +   LAA L+R+HFHDCFV+GCDGSVLL+   + +E++A PNL+L+    + VD  +  + ++C  ++SCAD+LAL ARD+VA+ GGP + +PLGRRD   SK    ++NLPSPF++   +  +F  K  NA++ V LSGGHT+G++ C    +RLY        DP+++ ++   LKR  P
Sbjct:   26 LDLDYYRSKCPKAEEIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKNDAERDAVPNLTLK--GYEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCP 231          
The following BLAST results are available for this feature:
BLAST of FC923094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER59_ARATH2.303e-4347.57Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PER9_ARATH3.007e-4344.39Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]
PERN_ARMRU1.493e-4247.09Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER49_ARATH1.493e-4242.93Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER15_ARATH5.672e-4243.41Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER64_ARATH7.407e-4241.90Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER42_MAIZE7.407e-4242.79Peroxidase 42 OS=Zea mays GN=PER42 PE=2 SV=1[more]
PER66_MAIZE9.674e-4243.00Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER71_ARATH1.263e-4141.71Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]
PER1_ARATH1.263e-4142.79Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31701A06EF StrClemenN Citrus clementina cDNA clone C31701A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923094 ID=FC923094; Name=FC923094; organism=Citrus clementina; type=EST; length=723bp
ACAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTTCATT
TCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGGCACA
AAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCT
GTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAA
AAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACGATTG
CTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTG
AGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAAATTT
GTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTC
TTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTG
GAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTC
GCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCT
CAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCT
CCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAATCGC
CTCTATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCT
CAAAAGACATGCCCCACTTCGGA
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