FC923094

Overview
NameFC923094
Unique NameFC923094
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:109..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.235e-30
Identity = 70/183 (38.25%), Postives = 105/183 (57.38%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL 653
            L+  FY ++CP+   I+R  I N    +   AA +IR+ FHDCF  GCD SVL+  +   T+E+++  NLSL  +    +   +  +   C   VSC+DI+++A RD +   GGP YD+ LGRRDS+T  + +    LP P +  + I+  F  K F  +E VALSG H++G +HC  F  R+
Sbjct:   21 LTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPNTVSCSDIISVATRDLLITVGGPYYDVFLGRRDSRTSKSSLLTDLLPLPSTPISKIIQQFESKGFTVQEMVALSGAHSIGFSHCKEFVGRV 203          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.813e-30
Identity = 79/211 (37.44%), Postives = 111/211 (52.61%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG---STSEQNARPNLSLRKEALKFVDDLRARVH--KECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS--KTFATV-VNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            L   FY  SCP +E IV+K +Q  +K+        +R+ FHDCFV GCD SV+++    + +E++   N+SL  +    V   +  +     C   VSCADILALA RD V  + GP+Y + LGR D    T A+V  NLP P +  T +   F +      + +ALS  HT+G AHC    NR+Y        DPTL+K +A  L+   P
Sbjct:   27 LKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACP 237          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER2_SOLLC (Suberization-associated anionic peroxidase 2 OS=Solanum lycopersicum GN=TAP2 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.980e-30
Identity = 78/180 (43.33%), Postives = 105/180 (58.33%), Query Frame = 3
Query:  117 KGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEG----STSEQNARPNLSLRKEALKFVDDLRARVHKECGRV-VSCADILALAARDSVALSGGPNYDLPLGRRDSKT--FATVVN-LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 632
            K LS     +SC  + S V+  + +A+  +  + A LIR+HFHDCFV GCDG +LL+      T EQN+ PN +      + +   +  V   C  + VSCADILA+AARDS+A  GG  Y + LGR D+ T  F+  +N LP+P  N TV +  F +K F  RE VAL+G HTVG A C
Sbjct:   69 KYLSQQLTQESC--VFSAVKGVVDSAIDNETRMGASLIRLHFHDCFVDGCDGGILLDDINGTFTGEQNSPPN-NNSVRGFEVIAQAKQSVVDSCPNISVSCADILAIAARDSLAKLGGQTYTVALGRSDATTANFSGAINQLPAPSDNLTVQIQKFSDKNFTVREMVALAGAHTVGFARC 245          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.472e-29
Identity = 70/203 (34.48%), Postives = 109/203 (53.69%), Query Frame = 3
Query:  120 GLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARP-NLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            GL   FY  +CP+ E IVR+Q++   K+    A   +R  FHDC V+ CD S+LL+ +  E   +  + S      +++++++  + +EC  VVSC+DIL L+AR+ +   GGP   L  GRRD   S+T      LP    + +V+L  F+    +    VAL G H+VG  HC    +RLYP+ DP+L+     ++    P
Sbjct:   30 GLMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCP 232          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.499e-26
Identity = 71/181 (39.23%), Postives = 105/181 (58.01%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE----GSTSEQNARP-NLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVAL--SGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTN 647
            +Y  +CP+ E+IV+  ++ A+ ++ G  A +IR+ FHDCFV+GCD SVLL+      T E+ A P N SLR    + +D ++  +   C  VVSCADI+A AARD+      G  ++D+P GR D   S    +V  L  P SN + + + F  K  +  + V LSG HTVG +HC +F +
Sbjct:   39 YYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLR--GFELIDAIKDALEAACPGVVSCADIIAFAARDASCFLSQGKVSFDMPSGRLDGTFSNASESVKFLVPPTSNLSDLASSFAVKGMSLEDLVVLSGAHTVGRSHCSSFVS 217          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PERN_IPOBA (Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.269e-25
Identity = 66/171 (38.60%), Postives = 94/171 (54.97%), Query Frame = 3
Query:  141 DQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRV-VSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHC 632
            D +C  + S V++ +  A+  +  + A LIR+HFHDCFV GCDG +LL  +   T EQ A  N S        +D  +     +C    VSCAD+LA+AARD+        Y++ LGR+D++T         LP+PF N ++    F +K FN RE V L+G HTVG + C
Sbjct:   68 DSNC--VFSAVKEIVDAAITAETRMGASLIRLHFHDCFVDGCDGGILLNDTANFTGEQGAPAN-SNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIAARDAFRKFTNQTYNITLGRQDARTANLTGANTQLPAPFDNLSIQTAKFADKGFNQREMVVLAGAHTVGFSRC 235          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.403e-24
Identity = 62/188 (32.98%), Postives = 98/188 (52.13%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQD 668
            LS  +Y ++CP+ E  + + + +        A G +R+ FHDC V GCD S+L+  +   TSE++A  N SL  +A   +  ++  V  +C  +VSC+DIL  A R  +++ GGP  ++  GR+DS           L  P      I++ F       +E VAL G HT+G +HC  F +R++ K D
Sbjct:   22 LSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDADINRSLPGDAFDVITRIKTAVELKCPNIVSCSDILVGATRSLISMVGGPRVNVKFGRKDSLVSDMNRVEGKLARPNMTMDHIISIFESSGLTVQEMVALVGAHTIGFSHCKEFASRIFNKSD 209          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.515e-22
Identity = 68/173 (39.31%), Postives = 94/173 (54.34%), Query Frame = 3
Query:  141 DQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNAR-PNLSLRKEALKFVDDLRARVHKECGRV-VSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCP 635
            D++C  + S V++ +  A+  +  + A LIR+ FHDCFV GCD  +LL  +   T EQ A   N S+R  A+  ++  +  V  +   + VSCADIL++AARDS     G  Y + LGR+D++T         L  P  N T  L  F  K FN  E VAL G HT+G A CP
Sbjct:   67 DEAC--VFSAVKEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAV--IEQAKQNVKTQMPDMSVSCADILSIAARDSFEKFSGSTYTVTLGRKDARTANFTGANTQLVGPNENLTSQLTKFAAKGFNGTEMVALLGSHTIGFARCP 235          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: APX6_ARATH (Putative L-ascorbate peroxidase 6 OS=Arabidopsis thaliana GN=APX6 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12
Identity = 50/149 (33.56%), Postives = 83/149 (55.70%), Query Frame = 3
Query:  183 IQNALKKDI--GLAAGLIRIHFHDCFVQGCDG-SVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVG 620
            +QN ++K +  G AAG++R+ FHD      D  S  + GS + +  RP     K++LK +   +A+V  +  + VS AD++++A  ++V++ GGP   + LGR DS        LP    + + +   F+ K F+ +E VALSG HT+G
Sbjct:  101 MQNEIRKVVTKGKAAGVLRLVFHDAGTFELDDHSGGINGSIAYELERPENIGLKKSLKVL--AKAKVKVDEIQPVSWADMISVAGSEAVSICGGPTIPVVLGRLDSAQPDPEGKLPPETLSASGLKECFKRKGFSTQELVALSGAHTIG 247          
The following BLAST results are available for this feature:
BLAST of FC923094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER31_ARATH2.235e-3038.25Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER73_ARATH3.813e-3037.44Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER2_SOLLC4.980e-3043.33Suberization-associated anionic peroxidase 2 OS=So... [more]
PER42_ARATH2.472e-2934.48Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER2_MAIZE1.499e-2639.23Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PERN_IPOBA1.269e-2538.60Neutral peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER6_ARATH1.403e-2432.98Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PERA_IPOBA8.515e-2239.31Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
APX6_ARATH7.988e-1233.56Putative L-ascorbate peroxidase 6 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionC31701A06EF StrClemenN Citrus clementina cDNA clone C31701A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923094 ID=FC923094; Name=FC923094; organism=Citrus clementina; type=EST; length=723bp
ACAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTTCATT
TCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGGCACA
AAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCT
GTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAA
AAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACGATTG
CTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTG
AGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAAATTT
GTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTC
TTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTG
GAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTC
GCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCT
CAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCT
CCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAATCGC
CTCTATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCT
CAAAAGACATGCCCCACTTCGGA
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