FC923094

Overview
NameFC923094
Unique NameFC923094
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:109..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.650e-41
Identity = 91/205 (44.39%), Postives = 126/205 (61.46%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATV---VNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLKRHAP 716
            FY  SCP+ E IVR  +  A +++  +AA L+R+HFHDCFVQGCDGS+LL+ S S   E+N+ PN S      + VD+++A +  EC   VSCAD L LAARDS  L+GGP++ +PLGRRDS T +      +LP P +    I   F  +  N  + VALSG HT+G + C +F  RLY +      D TL+K++A  L++  P
Sbjct:   39 FYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPN-SRSARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWTVPLGRRDSATASRAKPNKDLPEPDNLFDTIFLRFSNEGLNLTDLVALSGSHTIGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCP 242          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER2_ORYSJ (Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PRX112 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.801e-41
Identity = 93/202 (46.04%), Postives = 124/202 (61.39%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            LS TFYD SCP   S ++  +  A+  +  + A L+R+HFHDCFVQGCD SVLL G   EQNA PN  SLR      VD+++ +V   C + VSCADILA+AARDSV   GGP++ + LGRRDS T        +LP+P S+   ++ +F  K  +  + VALSG HT+G A C  F +RLY   +  +D +FA  LK + P
Sbjct:   25 LSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG--QEQNAGPNAGSLR--GFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLY--NETNIDSSFATALKANCP 220          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER2_ORYSI (Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX112 PE=3 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 4.801e-41
Identity = 93/202 (46.04%), Postives = 124/202 (61.39%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            LS TFYD SCP   S ++  +  A+  +  + A L+R+HFHDCFVQGCD SVLL G   EQNA PN  SLR      VD+++ +V   C + VSCADILA+AARDSV   GGP++ + LGRRDS T        +LP+P S+   ++ +F  K  +  + VALSG HT+G A C  F +RLY   +  +D +FA  LK + P
Sbjct:   25 LSATFYDTSCPNALSTIKSAVTAAVNSEPRMGASLVRLHFHDCFVQGCDASVLLSG--QEQNAGPNAGSLR--GFNVVDNIKTQVEAICSQTVSCADILAVAARDSVVALGGPSWTVLLGRRDSTTANESQANTDLPAPSSSLAELIGNFSRKGLDVTDMVALSGAHTIGQAQCQNFRDRLY--NETNIDSSFATALKANCP 220          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER60_ARATH (Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.271e-41
Identity = 88/202 (43.56%), Postives = 121/202 (59.90%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGG--PNYDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            FY Q+C  +E+IV K +  A  KD  +A  +IR++FHDCF  GCD S+LL+GS SE+ A PNLS+R    + +DD+++ V KEC RVVSCADI+ALA RD V L+ G    Y++P GR D K + A +V+LPSP          F ++  +  + V L GGHT+G+ HC    +RLY      K DP++D      L    P
Sbjct:   32 FYSQNCQNVENIVSKVVGEAFIKDSSIAPAMIRLYFHDCFSNGCDASLLLDGSNSEKKASPNLSVR--GYEVIDDIKSAVEKECDRVVSCADIIALATRDLVTLASGGKTRYEIPTGRLDGKISSALLVDLPSPKMTVAETAAKFDQRKLSLNDMVLLLGGHTIGVTHCSFIMDRLYNFQNTQKPDPSMDPKLVEELSAKCP 231          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.070e-40
Identity = 89/200 (44.50%), Postives = 121/200 (60.50%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            FY   C  +ESIVR  +Q+ ++     A G++R+HFHDCFV GCDGSVLL G+TSE+ A PN SLR    + +++ +AR+ K C R VSCADIL LAARD+V L+GG  +++PLGR D + + A+ VNLP P  +      DF  KT N  + V L GGHT+G A C     R        + DP++D +F   +    P
Sbjct:   41 FYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLLAGNTSERTAVPNRSLR--GFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLGRLDGRISQASDVNLPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCP 238          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.397e-40
Identity = 91/210 (43.33%), Postives = 125/210 (59.52%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS----TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            LS TFY  +CP + +IVR  +Q AL+ D  +   LIR+HFHDCFV GCDGS+LL+ +     SE++A PN +  +     VD+++  V   C  VVSC DILALA+  SV+L+GGP++++ LGRRD +T        +LPSPF N T +   F     N  + VALSG HT G A C  F+ RL+        DPTL+ T+   L++  P
Sbjct:   25 LSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTR-GFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGRAQCRTFSPRLFNFSNTGNPDPTLNTTYLATLQQICP 233          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.825e-40
Identity = 90/201 (44.78%), Postives = 121/201 (60.20%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT--FATVVNLPSPFSNTTVILNDFREKTFNARETVAL-SGGHTVGLAHCPAFTNRLYPKQ----DPTLDKTFANNLKRHAP 716
            FY  +CP  E+IVR  + +    D  +A GL+R+H HDCFVQGCDGSVLL G  SE+ A  N++L     + +DD + ++   C  VVSCADILALAARDSV+L+ G ++ +P GRRD +    + V NLPSP  +  +    F     N R+ V L  GGHT+G A C   TNR++       DPT+D+TF   L+R  P
Sbjct:   29 FYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGPNSERTAGANVNL--HGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTGRRDGRVSLASNVNNLPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFITNRIFNSSGNTADPTMDQTFVPQLQRLCP 227          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 166.007 bits (419), Expect = 1.825e-40
Identity = 93/205 (45.37%), Postives = 128/205 (62.44%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN----LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY--------PKQDPTLDKTFANNLK 704
            FY  SCP +E++VRK++  AL     LA  L+R+HFHDCFV+GCDGSVLL+    ST+E++A PN +LR     FV+ ++A V K C   VSCAD+LAL ARD+V LS GP + +PLGRRD +   ++ N    LP P +N T +   F  K  + ++ V LS GHT+G +HC +FT+RLY           DPTL+  +   L+
Sbjct:   28 FYSNSCPSVEAVVRKEMVRALGAAPSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQTLR--GFGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGR--VSIANETDQLPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLR 228          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.112e-40
Identity = 86/204 (42.16%), Postives = 132/204 (64.71%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFA---TVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            LS  FY ++CPK+   V+  +Q+A+ K+  + A L+R+ FHDCFV GCD SVLL+ ++S   EQ A PN +  +  L  +D+++++V   C  VVSCADI+A+AARDSV + GGP++D+ LGRRDSKT +      N+P P S+ + +++ F+ +  + R+ VALSG HT+G A C +F  R+Y   +  +D +FA   +   P
Sbjct:   27 LSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIR-GLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNNIPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARCTSFRARIY--NETNIDSSFAKTRQASCP 227          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.308e-40
Identity = 91/206 (44.17%), Postives = 120/206 (58.25%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS----EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            FY  SC   E IV+ +++    +D G+A GL+R+HFHDCFV+GCDGSVL++ + S    + +   N SLR    + +D  +AR+   C  VVSCADI+A AARDSV ++GG  YD+P GRRD   S       NLP P      +   F  K     E V LSG HT+G +HC +F+NRLY       QDPTLD  +A +LK   P
Sbjct:   65 FYRTSCGLAEFIVKDEVRKGFIRDSGVAPGLVRMHFHDCFVRGCDGSVLIDSTPSNTAEKDSPANNPSLR--GFEVIDSAKARLEAVCKGVVSCADIVAFAARDSVEITGGLGYDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKTQCP 268          
The following BLAST results are available for this feature:
BLAST of FC923094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER14_ARATH1.650e-4144.39Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]
PER2_ORYSJ4.801e-4146.04Peroxidase 2 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER2_ORYSI4.801e-4146.04Peroxidase 2 OS=Oryza sativa subsp. indica GN=PRX1... [more]
PER60_ARATH6.271e-4143.56Peroxidase 60 OS=Arabidopsis thaliana GN=PER60 PE=... [more]
PER69_ARATH1.070e-4044.50Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER15_IPOBA1.397e-4043.33Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER62_ARATH1.825e-4044.78Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER1_ORYSJ1.825e-4045.37Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER4_VITVI3.112e-4042.16Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER5_VITVI5.308e-4044.17Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]

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Properties
Property NameValue
Genbank descriptionC31701A06EF StrClemenN Citrus clementina cDNA clone C31701A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923094 ID=FC923094; Name=FC923094; organism=Citrus clementina; type=EST; length=723bp
ACAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTTCATT
TCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGGCACA
AAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCT
GTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAA
AAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACGATTG
CTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTG
AGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAAATTT
GTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTC
TTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTG
GAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTC
GCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCT
CAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCT
CCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAATCGC
CTCTATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCT
CAAAAGACATGCCCCACTTCGGA
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