FC923094

Overview
NameFC923094
Unique NameFC923094
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:109..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.183e-39
Identity = 87/204 (42.65%), Postives = 123/204 (60.29%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            LS TFYD +CP   + +R  ++ A+  +  +AA LIR+HFHDCFVQGCD S+LL+ +    SE+ A PNL   +     ++D +  V K C  VVSCADIL +AARD+ A  GGP++ + LGRRDS T +  +   +LP PF     +++ F  K  + R+ VALSG HT+G A C  F +R+Y      +D  FA+  +R  P
Sbjct:   29 LSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSAR-GFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETDLPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQCFLFRDRIY-SNGTDIDAGFASTRRRQCP 230          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.183e-39
Identity = 89/209 (42.58%), Postives = 129/209 (61.72%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVV--NLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            LS +FYD++CP++  I    I+ AL+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS +  +      + A  F  +D ++A V K C + VSCAD+LA+AA+ SV L+GGP++ +P GRRDS + F  +   NLP P S   V+ + FR    +   + VALSGGHT G   C    +RLY      K DPTLDK++ + L++  P
Sbjct:   26 LSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCP 234          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.545e-39
Identity = 87/188 (46.28%), Postives = 120/188 (63.83%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL---EGSTSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ 665
            L +  Y  SCP+ ESIV   ++  + +D  +AA L+R+HFHDCFV GCD SVLL   EG   E+ A PNL SLR    + +D +++ +   C   VSCADILA+AARDSV +SGGP +++ +GR+DS+T    A    LPSP S  + +++ F+    +  + VALSGGHT+G A C +FT RL P Q
Sbjct:   50 LDFGLYRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLR--GFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFTARLQPLQ 235          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 162.925 bits (411), Expect = 1.545e-39
Identity = 88/205 (42.93%), Postives = 128/205 (62.44%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNL-SLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            LS  FY   CP   S ++  + +A+ K+  + A L+R+HFHDCFVQGCD SVLL+ +   T E+ A PN  S+R    + +D ++++V   C  VVSCADILA+AARDSV   GG ++++ LGRRDS T    +   +LP+PF N + +++ F  K F  +E V LSG HT+G A C AF  R+Y   +  +D T+A +L+ + P
Sbjct:   24 LSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIR--GFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIY--NESNIDPTYAKSLQANCP 224          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.635e-39
Identity = 92/210 (43.81%), Postives = 125/210 (59.52%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVVN----LPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            L+ TFY  +CP   +IVR  IQ A + D  + A LIR+HFHDCFV GCD S+LL+ S    SE+NA PN +  +     VD+++  +   C  VVSC+DILALA+  SV+L+GGP++ + LGRRDS T A +      +PSPF   + I + F     N  + VALSG HT G A C  F NRL+        DPTL+ T  ++L++  P
Sbjct:    2 LNATFYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSAR-GFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLT-ANLAGANSAIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCP 209          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.635e-39
Identity = 91/210 (43.33%), Postives = 125/210 (59.52%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAPL 719
            L+ TFYD SCP + +IVR  I N L+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS +  +        A  F  +D ++A V   C R VSCAD+L +AA+ SV L+GGP++ +PLGRRDS + F  +   NLP+PF     + + FR    N + + VALSGGHT G   C    +RLY        DPTL+ T+   L+   PL
Sbjct:   32 LTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPL 241          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER10_ARATH (Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=1 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.635e-39
Identity = 83/188 (44.15%), Postives = 118/188 (62.77%), Query Frame = 3
Query:  111 VAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 656
            +   L++ FYD+SCP+L++IV+  +  A K D  +AA L+R+HFHDCFV GCDGS+LL  S     E+NA+PN +      + ++D+++ +   C   VSCADI+ALAAR++V L+GGP + +PLGRRDS T    A   NLPSPF     I   F     + ++ V LSG HT+G A C    +RL+
Sbjct:   44 LTSNLNYRFYDRSCPRLQTIVKSGVWRAFKDDSRIAASLLRLHFHDCFVNGCDGSILLNDSEDFKGEKNAQPNRN-SVRGFEVIEDIKSDIESSCPLTVSCADIVALAAREAVVLTGGPFWPVPLGRRDSLTASEQAANTNLPSPFEALENITAKFVTLGLDLKDVVVLSGAHTIGFAQCFVIKHRLF 230          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.441e-39
Identity = 82/204 (40.20%), Postives = 127/204 (62.25%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFATVV---NLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQDPTLDKTFANNLKRHAP 716
            L+  FY  SCP L S V+  +++A+  +  + A ++R+ FHDCFV GCDGS+LL+ +   T EQNA PN +  +     +D++++ V K C  VVSCADILA+AARDSV   GGPN+++ +GRRD++T +      N+P+P S+ + +++ F     + R+ VALSG HT+G + C  F  R+Y   +  ++  FA   +R  P
Sbjct:   30 LTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSAR-GFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIY--NETNINAAFATTRQRTCP 230          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 4.494e-39
Identity = 82/205 (40.00%), Postives = 129/205 (62.93%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK---TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            FYDQSCPK + IV+  +  A + D  + A L+R+HFHDCFV+GCD S+LL+ S    SE+ + PN +  +   + +++++  + +EC   VSCADILALAARDS  ++GGP++++PLGRRD++      +  ++P+P +    IL  F+ +  +  + V+LSG HT+G + C +F  RLY      K D TL + +A  L++  P
Sbjct:   37 FYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSAR-GFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCP 240          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 161.384 bits (407), Expect = 4.494e-39
Identity = 91/210 (43.33%), Postives = 126/210 (60.00%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLL---EGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS----KTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            L + +Y +SCP  E I+ K I++       +A  +IR+ FHDCF++GCD SVLL   E  TSE++A PNLSL+      +D +++ +   C  VVSCAD+L LAAR++V ++GGP Y L  GR+DS    + FA    LP+P +  +VIL  F  + FN RETV+L G H++G+ HC  F NRLY      K DP L+  F   LK   P
Sbjct:   68 LHYDYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNLSLK--GFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAE-HELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCP 274          
The following BLAST results are available for this feature:
BLAST of FC923094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PERX_NICSY1.183e-3942.65Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PER2_ARMRU1.183e-3942.58Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER40_ARATH1.545e-3946.28Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER1_ARAHY1.545e-3942.93Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PERA2_ARMRU2.635e-3943.81Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER1A_ARMRU2.635e-3943.33Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER10_ARATH2.635e-3944.15Peroxidase 10 OS=Arabidopsis thaliana GN=PER10 PE=... [more]
PER52_ARATH3.441e-3940.20Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER72_ARATH4.494e-3940.00Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER48_ARATH4.494e-3943.33Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionC31701A06EF StrClemenN Citrus clementina cDNA clone C31701A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923094 ID=FC923094; Name=FC923094; organism=Citrus clementina; type=EST; length=723bp
ACAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTTCATT
TCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGGCACA
AAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCT
GTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAA
AAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACGATTG
CTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTG
AGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAAATTT
GTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTC
TTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTG
GAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTC
GCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCT
CAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCT
CCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAATCGC
CTCTATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCT
CAAAAGACATGCCCCACTTCGGA
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