FC923094

Overview
NameFC923094
Unique NameFC923094
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
StrClemenNcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10680 contig Ccv1_Contig10680:109..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.665e-39
Identity = 89/209 (42.58%), Postives = 124/209 (59.33%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGS---TSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKT---FATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            L+ TFY  +CP   +IVR  IQ AL+ D  + A LIR+HFHDCFV GCD S+LL+ +    SE+NA PN++  +     VD+++  +   C  VVSC+D+LALA+  SV+L+GGP++ + LGRRDS T        ++PSP  + + I   F     N  + VALSG HT G A C  F NRL+        DPTL+ T  + L++  P
Sbjct:   32 LNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSAR-GFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCP 239          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 7.665e-39
Identity = 88/209 (42.11%), Postives = 129/209 (61.72%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVV--NLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            LS +FYD++CP++  I    I NAL+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS +  +        A  F  +D ++A V K C + VSCAD+LA+AA++SV L+GGP++ +P GRRDS + F  +   NLP+PF     + + F+    + A + VALSGGHT G   C    +RLY        DPTLDK++ + L++  P
Sbjct:   24 LSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCP 232          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER66_ARATH (Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=2 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.001e-38
Identity = 82/213 (38.50%), Postives = 127/213 (59.62%), Query Frame = 3
Query:  108 PVAKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTFAT--VVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL-----YPKQDPTLDKTFANNLKRHAP 716
            P    L   +YDQSCP  E I+ + ++NA   D  + A L+R+ FHDCF++GCD S+LL+ + S   E++  PN+S+R  +   ++D + ++ K C R VSCAD++A+AARD V LSGGP + +  GR+D          NLP P  N + ++  F  +  + ++ V LSGGHT+G +HC +F +RL     +   DP+++  FA  LK+  P
Sbjct:   21 PSEAALDAHYYDQSCPAAEKIILETVRNATLYDPKVPARLLRMFFHDCFIRGCDASILLDSTRSNQAEKDGPPNISVR--SFYVIEDAKRKLEKACPRTVSCADVIAIAARDVVTLSGGPYWSVLKGRKDGTISRANETRNLPPPTFNVSQLIQSFAARGLSVKDMVTLSGGHTIGFSHCSSFESRLQNFSKFHDIDPSMNYAFAQTLKKKCP 231          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 1.001e-38
Identity = 91/213 (42.72%), Postives = 127/213 (59.62%), Query Frame = 3
Query:  114 AKGLSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATV--VNLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAPL 719
            A  L+ TFYD+SCP + +IVR+ I N L+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS +  +        A  F  +D ++A V + C R VSCAD+L +AA+ SV L+GGP++ +PLGRRDS + F  +   NLP+PF     +   FR    +   + VALSGGHT G   C    +RLY        DPTL+ T+   L+   PL
Sbjct:   29 AAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLELANANLPAPFFTLPQLKASFRNVGLDRPSDLVALSGGHTFGKNQCQFILDRLYNFSNTGLPDPTLNTTYLQTLRGLCPL 241          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.308e-38
Identity = 87/209 (41.63%), Postives = 129/209 (61.72%), Query Frame = 3
Query:  123 LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKF--VDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVV--NLPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            LS +FYD++CP++  IV   I NAL+ D  +AA ++R+HFHDCFV GCD S+LL+ +TS +  +        A  F  +D ++A + K C R VSCAD+LA+AA++S+ L+GGP++ +P GRRDS + F  +   NLP P S    + + F+    + + + VALSGGHT G + C    +RLY        DPTLDK++   L++  P
Sbjct:   24 LSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAIEKACPRTVSCADMLAIAAKESIVLAGGPSWMVPNGRRDSLRGFMDLANDNLPGPSSTLKQLKDRFKNVGLDRSSDLVALSGGHTFGKSQCQFIMDRLYNFGETGLPDPTLDKSYLATLRKQCP 232          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.308e-38
Identity = 91/199 (45.73%), Postives = 120/199 (60.30%), Query Frame = 3
Query:  132 TFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE---GSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSKTF---ATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRL-YPKQDPTLDKTFANNLKR 707
            TFYD+SCP + +IVR+ +Q AL  D    A LIR+HFHDCFV GCDGSVLLE   G  SE  A  N ++       V++++A V K C  VVSCADILA+A+  SV L+GGP +++ LGRRDS+       +  LPSPF N T +   F     ++ + VALSG HT G + C  F  RL     D TL+  +A  L++
Sbjct:    1 TFYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSELAAPGNANI--TGFNIVNNIKAAVEKACPGVVSCADILAIASVGSVNLAGGPCWEVQLGRRDSRRANLQGAIDGLPSPFENVTQLKRKFDRVDLDSTDLVALSGAHTFGKSRCQFFDRRLNVSNPDSTLNPRYAQQLRQ 197          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.230e-38
Identity = 84/181 (46.41%), Postives = 114/181 (62.98%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLE----GSTSEQNARP-NLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK--TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY 656
            FYD SCP  E++VR+ +  A  KD G+AAGLIR+HFHDCFV+GCDGSVLL     G  +E++A P N SLR      +D  +  V + C R VSCADI+A AARDS++L+G  +Y +P GRRD +       V+LP P S    + + F+ K  +  + V LSG HTVG + C +F  R++
Sbjct:   39 FYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLLTVNPGGGQTERDALPNNPSLR--GFDVIDAAKTAVEQSCPRTVSCADIVAFAARDSISLTGSVSYQVPAGRRDGRVSNATETVDLPPPTSTAQSLTDLFKAKELSVEDMVVLSGAHTVGRSFCASFFKRVW 217          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.913e-38
Identity = 91/206 (44.17%), Postives = 127/206 (61.65%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTS---EQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDS-KTFATVVN--LPSPFSNTTVILNDFREKTFN-ARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAP 716
            FY ++CP + +I+   I N L+ D  +AA L+R+HFHDCFV+GCD S+LL+ STS   E++A PN +        +D ++A + + C R VSCADI+ +A++ SV LSGGP + +PLGRRDS + F  + N  LPSPFS  T +   F +   N   + VALSGGHT G A C   T RLY      + DP+L+ T+   L+R  P
Sbjct:   35 FYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKN-SVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCP 239          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.969e-38
Identity = 88/211 (41.71%), Postives = 125/211 (59.24%), Query Frame = 3
Query:  108 PVAKG-LSWTFYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGST---SEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRD---SKTFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLYPKQ-----DPTLDKTFANNLK 704
            PVA   L + FY +SCP  E+IV   ++    +D  + A L R+HFHDCFVQGCD S+L++ +T   SE+NA PN S+R    + +D+++  +  +C   VSC+DI+ LA RD+V L GGP+Y +P GRRD   S        LP PF +   +L+ F  K  N  ++VAL G HTVG+A C  F +R+   Q     DP++D T A  L+
Sbjct:   17 PVALAQLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGPNFSVR--GFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILPPPFISVEGMLSFFGNKGMNVFDSVALLGAHTVGIASCGNFVDRVTNFQGTGLPDPSMDPTLAGRLR 225          
BLAST of FC923094 vs. ExPASy Swiss-Prot
Match: PER70_ARATH (Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.489e-38
Identity = 86/201 (42.79%), Postives = 120/201 (59.70%), Query Frame = 3
Query:  135 FYDQSCPKLESIVRKQIQNALKKDIGLAAGLIRIHFHDCFVQGCDGSVLLEGSTSEQNARPNLSLRKEALKFVDDLRARVHKECGRVVSCADILALAARDSVALSGGPNYDLPLGRRDSK-TFATVVNLPSPFSNTTVILNDFREKTFNARETVALSGGHTVGLAHCPAFTNRLY-----PKQDPTLDKTFANNLKRHAPL 719
            +Y  +C  +ESIVR  +++    +   A G++R+HFHDCFVQGCD SVLL G  SE+ A PNLSLR      +++ + ++   C R VSCADILALAARD V L+GGP + +PLGR D + + A+ V LP P  +  V    F EK  N ++ V L+ GHT+G A C  F +R +        DPT+  +F   ++   PL
Sbjct:   38 YYGSACWNVESIVRSVVESNYLANPANAPGILRMHFHDCFVQGCDASVLLAGPNSERTAIPNLSLR--GFNVIEEAKTQLEIACPRTVSCADILALAARDFVHLAGGPWWPVPLGRLDGRISLASNVILPGPTDSVAVQKLRFAEKNLNTQDLVVLAAGHTIGTAGCIVFRDRFFNYDNTGSPDPTIAPSFVPLIQAQCPL 236          
The following BLAST results are available for this feature:
BLAST of FC923094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER53_ARATH7.665e-3942.58Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER37_ARATH7.665e-3942.11Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER66_ARATH1.001e-3838.50Peroxidase 66 OS=Arabidopsis thaliana GN=PER66 PE=... [more]
PER34_ARATH1.001e-3842.72Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER38_ARATH1.308e-3841.63Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER2_CUCSA1.308e-3845.73Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER1_MAIZE2.230e-3846.41Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER23_ARATH2.913e-3844.17Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PER28_ARATH4.969e-3841.71Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER70_ARATH6.489e-3842.79Peroxidase 70 OS=Arabidopsis thaliana GN=PER70 PE=... [more]

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Properties
Property NameValue
Genbank descriptionC31701A06EF StrClemenN Citrus clementina cDNA clone C31701A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC923094 ID=FC923094; Name=FC923094; organism=Citrus clementina; type=EST; length=723bp
ACAAAGCGAGGTAATCAACAATGGCAACTGCTTCAGCTTCTTCTTTCATT
TCTCTTCTTTTGATATCTTCTCTTTTGCTTGCTTCTTTCACTGAGGCACA
AAAGCCCCCAGTAGCGAAAGGTCTCTCATGGACTTTTTATGACCAGAGCT
GTCCCAAGCTTGAATCCATTGTCAGAAAACAGATCCAAAATGCCCTGAAA
AAAGATATCGGCCTAGCTGCTGGCTTGATTCGCATCCATTTCCACGATTG
CTTCGTTCAGGGATGTGATGGATCAGTGTTGCTAGAGGGATCAACTAGTG
AGCAAAATGCACGTCCAAACCTAAGCTTAAGGAAGGAGGCTTTAAAATTT
GTAGACGATCTTCGTGCTCGTGTTCACAAGGAGTGTGGCAGAGTTGTTTC
TTGTGCTGATATTCTTGCCCTTGCTGCTCGCGATTCTGTTGCCTTGTCTG
GAGGGCCGAATTACGACCTACCATTGGGAAGGCGAGACAGCAAAACATTC
GCAACAGTGGTAAATCTGCCATCACCGTTCAGCAACACCACCGTGATCCT
CAACGATTTCCGAGAAAAAACCTTCAACGCCAGGGAAACCGTGGCCCTCT
CCGGCGGGCACACCGTTGGGCTAGCTCACTGCCCTGCATTCACCAATCGC
CTCTATCCCAAACAAGACCCCACACTGGACAAAACATTCGCCAACAATCT
CAAAAGACATGCCCCACTTCGGA
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